RLG00000008153

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000582
Physical Location & Seq
Reverse (-)
26298507 .. 26317379
18873 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008153

Sequence Viewer

Length: 8559 bp
ATGGCCGGTTACCCTCATCACTTCCGCCCCTCCAGTGGGGACTGGAACTGGGCACACCCACCTCCTCACCTCTCCCATCCACAATTTCCTTACCCCAATTTTCCTCCCCAAAACCCCACCAATTTAAACATCTATCCCCCTCAACCTTCCGCCTTTCCACCACCGCAACCGCAACCGCAACCGCCGCCGCCGCAACCGTCAAACCCTAATTTCCCCCTCCAACACCCTATAGACGTCAATATCTTTCCCGCCAACCACTATGGACACTCCTCATTTTCCAATTACTACCCGACCCCAACCTCTAATTTCTCTGTGCAAAACCCTAACCCCACTCCTCACTCCACTCCACCCTTTCCCCCTCAGAGCTTCTCCCGTAACCCTAACGAGGCGCCCGACCCGCCGAACCTCTCGAATACGGCTAGGCATTTGCCTGAGGACCCGAGAGAGGTGCTCGAGAAGATCGACCGTGCGGTGGAGAAGCTTCGTGGCGAGCTTGTCGCCGCCGGAAAGAACGTCTCGGCCTGGAAGGTGTTACAGTCTGCGCTTCTGATGCTCAATGTTGATGCCGAGACTTGTTTGGGGCTCAAAGTTGAGCAAGTGCCGTCTCTACACCGCCTCATGGTCACTGAAGGAAGGATAAATGCATTTATCCATTGCTTTGTTGGGGTTCGAACAATTACATCTTTGTATGATTTGGAAGTTGCAATCTGCAAGAATGAGGATATTGAGCAGTTTGAAGAGCTTGGATTGGGTCCTTTGTTGCAACACCCACTAGTTTTGCAATATTTCTCGGTGGATTCTGAAACATCTGAAGTCTTTAAGATATCTAGTGAGGAGATACTACATTTACTCAGTAGGTACCTAAAGAAGCTGAAAGTTGAGGATAATTCTGTTGAGGGTTTCTTGGACTTCATTGTGACGAAGCGACCTGTTGCAGGCAAGGAAAAGCTTGGAATTCGAATATTTAGTTTGGGGGTGCATGCTTCTGCTATGCGTGAAGCCAAGGCTTCAGAACGTGCAGCTTTATGGAAATCATTACAGGAATTAAAACAAAAGTCTCCCAAAATATCTAGGAGGAAGGCACCAATTTTATCCTCGCTGAAAAAGCGGCTAGATAAACATTTTCATGCCATTTCGCAGCAATCTGGATTGTGTTCTGTTGTACACAAGAATGGAAAGGAAGATACACTTGTTTCTTCAAGATCAAAAGATGAAGATATTAATGATTATTTACATGATGACAAAGGTAATGACCATGGTACTGGTGGTCATATTGACTCATTAAAATCCCTGAAAAGTTCTGACAGAGAGGGTAAGTGTTCTTACATGTCTGAAGTGGAGGAGAGGTCTTCGCTCATGTCAAACCACCCTTCTCCAAGCCAAAAGCATAATGAGAGTAATGGGTCAGTTAAAAAGAAAAGAAAATATGAAACTCTAAGCTGCCCTATCTCTGTTCCTTCAAAGTTGTGCAAGAGAGAGAAGGTAGAGCAAGATGCTCTTCCTACAGAGAGTGACATTGAAACCAAGGCGGTCAGCGAGGTGCTGAAACTTGATCTTTCAATTGCCAATAATCTTTTGAGGATGTTCATTACAACTTGGAAGGAGGCATGTAGGGAGCAGCCTGTGGCTAAGGTACTTTGGGACATGCTTCGCTCTTGTAATAAAAAAAAAAACAAGGCAAAGAGAATCATGGCAATGTTTTCGACATACCCTTTGGTCGGATTACTCAATGTTGCTGTCTCATCTATCAAATGTGGAATGTGGGATAATATGTTTGATACGTCCCAAACCATTAGTCCACGTGAGTTGGATAACACTGTAACTGATAATTATCCTGAACATGTCGAACAAAGTATAAAGGATGCACCATCAGTCAGCACCGAATGTGCTACCGAACATGGGCTAACCTCTTGCTGCCTGAAGCCAAATCATCGGGATCGTCCACGTCGGTGGAGGAAGATCCCGAGGAGTCGTAAGAAGTTGGAGCCTGAAAACGGACACATCTGCTACCTTTGTCATCAAGAGGGACACGTCAAGAGAAGATGCCCTCTGCGGCAGCAAACTAAAAAATCATCTTATGAACCACAGAGTCCTCAACAATTGGCTCAGTATTCTATTTCCGGAGAAGAGGTGGAGGAGAAAGTCAGTGCTGTGGTGGACGACTCCACAGGTGTTTCAGTTAAAGAGATAATCAGGAAAGTTGCTACATATTTTGAGACTGATCATGGAATGTCTAGCAATGGTGAATCACTTCCGGAGAAGATATTTATTTACTTCAGAAAGCTTTGCAATTGTGAGCTCTGGTTGACTGAAGAATTTTCTGTCAAGGAATTTAGATCCCTTGGTTATGGGGAATTTATGATGTTTTTAGAAAAGTATGCCCGTCTTCTGCCACCGGAGATGTGCAAGTTCTTGAAAGATGACAGCAGTGGAAAGTTTCCTTTGGAGGTTTGCATGCTTCCACATTATTTAGTTGTTTTGGTATCTCAAGCTTTAAACAATTTATGGGAGGACCAAAAGATTACCAAACTGAACATTTCTTCTCTGCTTGGGAAGCAGTTCCCGGCCCTTTGTTTCCATACCATTGAAAATGGTTCAGTGGAAGACTTTAAAAGTATAGTAGGAAAGCATAAAGACACTGCAATTTCCAAATGTGTACTATTTTCAATGACAATATGCGGAACTAGTTACACTCTAGAATCATTGGAAAACTGTAGTAAGAATGCTGTATTGAAAAGCAGTTTGGTGAGTGTTAACAGTGGCCAGAAAATAAGCAATCAATCTGTTGCATCCAAGGAGGCAATTGCAGTCTTACTTAGGGCACCCATGATGTCAGATTTGAATTTATGGTCACATTGGGACCTCTTATTTGCTCCCACTCTTGGCCCTCTTGTACCATGGTTATTGAATGAAGTCAACACAGATGAATTACTCTGTTTGGTAACCAAAGATGGCAAAGTTATTCGGTTAGATCATTCAGCTACTGTAGATTCATTCTCGAAAGCTGCTCTTCAAGGATCCTCTTTTCAAACAGCAGTGAAAATGTTATCTCTCTTTTCACTGGTTGGGGGAGAAAAACATGTCCCCGTGTCCCTTTTGAAATTCCATGTACAGCGTGCATTTGAAGTTATTTTCAAGACCTATCTAGATGGTATGGAAGTATATGACAAGAAGAGTTCTCTTAATCAAGGAACAGTTTTGTGTGGACAGAAAATGGTTGTTGAAATTGCTGCTGGTAAATGCAGTAACTTACACAGAGCTGTAACGCAGACGAAAATTGCTGAGTCTGTTATATCACATTTTTTTCTTGATTGCCTGGGGTATCTACCTGCAGAGTTTCGCAGTTTTGCTGCTGATGTGTTACTTTCTGGGATGCGGTCTGTTTTTAAGCATGCGGCTTCAGCCATTTTGGATGAATGCATCCAAATAGAGCAGCGTCTCATACTTCATGAAGTTGGCTTATCTCTTGGTATAGTGGAGTGGATTAGTGATTACCATGTATTTAGTTCCTTGGATTCTACTGATTTGTTCATGTCTGAGGATTCTGGTCTCAATGCTGATAGAGATCAAATGGGGTCAGACTCAAAATATATGCAAAATGTGTCAAAAAAGTTGGCTGCTTCTGAACAGAGTATGGCTGCATCTGTTAGGGCAGATGAGCATAAAGGAGGATGTGCTGATGTTAGCCGGATGGTTGATGGTGCAGGAGTTTCTGATGCTGGGATTGGCATTGGCATTGGTTACAGACAACATCCTACTAATATTAATGAACATGAAGATGCTTTCCAGGTTATTGAGTCAATCAGGAGAGATGAATTTGGTTTGGATTCAAGCCCATTGACCTTTGAAAGTATCGTCTTAAAGAAACAGCATGCTCGCTTAGGGAGAGCTCTGCACTGTCTTTCACAGGAATTATATTCTCAAGATTCTCATTTTCTTCTTGAGCTGGTTCAAAATGCTGATGATAATACTTATCCAACAAATATAGAACCAACTCTTGCATTCATTCTTCAAGAATCAGGTATTGTTGTTTTGAATAATGAGCAAGGCTTCTCTGCCCAGAACATTAGAGCACTTTGTGATGTTGGAAATTCAACCAAGAAAGGATCCAGTGCCGGATATATAGGGCAAAAGGGCATCGGTTTCAAATCAGTATTTCGTGTCACAGATGCTCCAGAAATTCATTCTAATGGATTTCATATCAAGTTTGATACAAGTGAGGGTCAGATTGGTTTAATTCTGCCCACAGTTGTACCTCCTTGCAATCTTGAGTTGTTTAGACAGCTGACATCTAGTGACATTGATAAACCAGATTGTTACTGCTGGAAAACTTGTATTGTTCTTCCTTTCAGATCGAAAGTATCAGATGGAACTGTCTTGAACCACATAATGAATATGTTTTCAGATCTTCATCCATCTTTACTACTCTTTCTTCACCGCCTCAAGTGTATCCGGTTTAAAAACCTAATCGATGATTCACTTACTGTCATGAGAAAAGAAATTGTAGGAGACGGTATTGTCAAGGTTTCACATGGGAATACAAAGATGACATGGTTTGTAGTATCTCAGAAATTGCACTCAGATAATCTTCGTAGTGATGTGCAAACAACAGAAATCTCAATTGCTTTTACATTGAAGGAATCAGATAAGGGCATTTATCGTCCAGATATAGGCCAACAGCCTGTTTTTGCATTTCTTCCTCTTAGAACATACGGACTGAAATTTATTGTTCAGGGTGATTTTGTTCTTCCTTCATCCAGAGAGGAAGTGGATGGAGATAGTCCCTGGAACCAATGGCTATTGTCAGAATTTCCTGGTTTATTTGTCGATGCAGAGAAATCATTTTGTTCTCTTCCATGTTTCAAAGAGAATCCTGGGACTGCTGTGGCAGCTTACATGTCCTTTGTTCCACTTGTTGGGGAAGTGCATGGTTTCTTTTCTTCTCTTCCTCGATTAATTATTTCTAAATTACGGATGTCAAATTGCGTACTTCAGGAAGGAGAAAAGAAAGAATGGGTTCCTCCTTGCAAGGTCCTAAGAAATTGGAGTAAACAGGCTCGTTCACTTCTCCCTGATGGTCTACTGCATGAGCATCTTGGCCTTGGATTCTTGGATAAAGATATAGTTCTGCCTGATCCACTAGCAAGAGTTCTAGGTATTGCAGAGTATGGGCCCACAGTTCTGCTTCAGGTAATGGCTTCTTTATGTGGTAAGCAGGATGGCCTCAAATCAATGGGAATGGGTTGGATGGCCTCTTTGCTTAGTGAACTTTATGCAATGTCATTCAAATCTTCTGTTGAAACTTCCTTTGATTCTGGAATAGAAATGGGATTCCTAGAAAAACTTCAAAAAATTCCATTCATACCTCTTTCAGATGGTACATATGGTGCAGTCGTTGAAGGCCCAATTTGGCTACAGTTTGATGCCGTAGGGACTGGTTTTGGGGATCATCATGGACTTGAATCTTTTCCAAAGTTATATGCTAAACTTCGGATTGTAAGTCCGGAGCTCTATGCATCGTCTGCTGATATGCCATCCATGGATGTGACGCCGATTGACAAAGTCATTAGTATGCTCCATAGAATTGGTGTCCAACGGTTGTCCGCACACGAGATTCTCAAGGCTCACATCTTGCCAGCTATATCTGATGATAGAATTATAGTTAGGGATGAAGATTTGATGACTGATTATATCTGCTTCGCAATGGTTCACTTACAGTCGAGCTGCTCTGATTGTCATGCTGAAAGGGAATACATAATATCAGAACTACAAAATAAAGCTTATATTCTAACTAATAATGGCTTTAAACGACCTGCTGAGGCATCAATTCATTTCAGTAAAGAATTTGGAAATCCAGTGGACATAAGTAGGTTGATTGATAGGGTAAATCTGACATGGGATGAGGTTGATATCTCCTATTTGAAGCATCCAGTTGCAAAATCACTTCCAAATGGACTGATGAAGTGGAGAGATTTTTTCCAGAAAATTGGCATTGTGGATTTTGTGAAGGTAGTTCAAGTTGAGAAGGGTTTCACTGAGTTGTCTGAGGCTCTATTTAATAATCTAACTTGGGACCAGCACACTATTTCCCATGGGTTGAATGCCACAGATTGGGAATCACCTGAGTTAGTCCATTTATTATCCCTATTGTCCAGAGATGGCAACAGAAAAGGTTGTGAGTATCTCTTAGAGGTTCTTGATAAATTATGGGATGATTGCTATAGTGACAGAGCTACAGGGTACTGCTCTTCTAAGTCTGTTGCGGATAGAAAGCCCTTCAAATCTTCATTTATGAGCACCATCTGTGATGTGCAATGGGTAGTGTCAGGAATGGATGATAAACTTCACTATCCCAAGGATCTATATCACGACAGTGTTGCAGTGCGGTCAATTCTTGGTGGATCTGCCCCATTTTTTGTTCCTAAGGCTACCAGTGAAAAATTTGTATCTGATATTGGTTTTAAGACAAGAGTCTCTCTTCACGATGCTCTGGAGATGTTGAAACTATGGAGATGTGAGAATCCGTTTAGGGCCAGCCTAGCACAAATGTCCAAATTTTACTCATTAATCTGGAATGAAATGGCTTCTTCAAAGAAGACAACTGCAGAGGAATTCTATTTGGAACCTTTTGTATTTGTTCCATATGAATCTAGCTTCCGGCATGAGGATGTGGTGTCTGGTACATTTCTGTCCCTTGAAGAAGTATACTGGGATGATTCTACTTTCTTTGTGGACCAAATCAAGGAGATCCATCATCAGTGCAACTCAACAGTTGGTAATCATGGCCCCATAAACAGGATTCTGAGTAATTTCTACCCGGCCTTTCATGACTTCTTTGTTGATATATGTGGAGTACATGAGATCCCTCCTCTTCGTAGCTACCTTCAGATTTTGCGACAGTTTTCAAATGCTGTTTTGCCTTCACAAGCAGCTAATGCTGTTTTTCAAGTTTTTCAGAAGTGGGCTGATGGGCTCCAATCTGGAATGAGTGCTGAGGATATTGTATACTTGAAAGATTCTCTTACAAGGATGGAATGTACTGTGCTTCCTACTGTACAGGATAAGTGGGTATCTCTACATCCTTCCTATGGTCTCCTGTGCTGGTGTGATGATATGAAGTTGAAGAAGCAGTTTATGCATATGGATGGACTTGATTTTCTTTACTCTGGTGGACTAAGTAATGATGATGAAGAGATCCTAAGTACAAAAATGTCCGTCCTCATGCGAACCTTAGGGATTCCTGCACTTTCAGAGGTTGTGACTCGTGAGGCGATGTTTAATGGTCCGACAGATTCTAGCTTTAAAGCTGCATTGCTGGATTGGGCTCTGCCATATGCGCAGCGCTACTTACATAGTTTACATCCTGATAAATATTCTCAACTCAAGCAGTCTGGATTCGATATACTAAATCGTTTGCGAGTAGTAGAAGTTCAAAAGCTGTCCTACCGCAATGTTATAAAGATTGCTGGAAGTGAATCCAAGAAGCAAATTGAATGTAGTTGTGTTCTGCAGGATCACGATCTGTATACAACCCAGGAATCAGATTCTCACGCATTATTTATGGAGCTTTCTCGTTTGTTTTTTGATGGAATACGAGAATTACACTTGGCAAATTTCCTTCATATGATCACAACAATGGCTGAATCAGGTTCAACTGAGGAGCAGATAGACTTTTTTATCTTCAATAGCCAAAAGGTGCCAAAGCTTCCTGATGGAGAATCTGTTTGGTCCCTGTCACATGTGCATAATGATAGGTTACCCCAGCCAAGTGACTGGCGCTTTGTTGGTTGGAAAGCCCCACTAAGCTTTGGTTATGCAAATCTTTTCAAGGCTCAGGCACAATTTGCACAGCTTACCAGTGTCTCACAAATGGAAATGGATAATGATTCTGAAACCCATGTCAGACAAACAGTTGAATCAACTCCCATTTCAGTCGACATTAAATGGACAATTGGTGAGGGTACAGCAACAACTTCTGCACCTTTAGTGCTGCCAAACTCCAATGATTTGCAAGAACACTTTGATGATGAGACTGATATGGATACTGATTTCAATCCTAATAATCTAGATTTTGTTGTTGACCCTCGCGTTTTGGGTTCATCTGATTGTAGCAAGGTAGACCATCCTAGATATGGCTCCAGTGGAAGAGATGCAATGCGTGGAAGAGATGCAATGCTTACCGGGAGGTTAGGTGAGGTTGTAGCTTTTAAGTACTTAATTGCAAAAGCTGGCAAGTCTGTTGTGAGGTGGGTTAATGAAAGAATTGAAACTGGGCTACCCTATGACATAGTTGTAGGTGAGAAGGAAGATAGTCTAGAGTTCATTGAGGTTAAAGCCACCCAACAACAAAAAAAGGATTGGTTCCACATATCAACGAGGGAGTGGCAATTTGCAGCGGAAAAAGGTGAAGCCTTCAGCATTTTGCACGTCCTCTTATTGGGTAATAATGCTGCAAGAGTCTCAGTTTACAAGAATCCTGTAAAATTGTGTCATCTGGGCAAGCTACAGTTGCATCTTTCTATGCCTAGGCAGGAGAAGGAATTATTTCTTGTGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

2853

Amino Acids

320.68

Weight (kDa)

6.05

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 1310 - 1411 2.5e-08 Sacsin domain
NOV_C PF13020 2731 - 2817 7.3e-20 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 7457
AasI GACNNNNNNGTC 1 cut(s) 4517
AatII GACGTC 1 cut(s) 237
Acc16I TGCGCA 1 cut(s) 7338
Acc36I ACCTGC 2 cut(s) 3337, 5821
Acc65I GGTACC 1 cut(s) 858
AccB1I GGYRCC 5 cut(s) 388, 858, 1081, 2821, 7696
AccB7I CCANNNNNTGG 2 cut(s) 4916, 6111
AccI GTMKAC 6 cut(s) 5080, 6705, 7005, 7526, 7935, 8118
AccII CGCG 1 cut(s) 8088
AccIII TCCGGA 3 cut(s) 2120, 2254, 5503
AcoI YGGCCR 2 cut(s) 3, 2761
AcvI CACGTG 1 cut(s) 1802
AcyI GRCGYC 3 cut(s) 234, 389, 5549
AdeI CACNNNGTG 1 cut(s) 4079
AfeI AGCGCT 1 cut(s) 7343
AflIII ACRYGT 6 cut(s) 1326, 1840, 2029, 3079, 4896, 7738
AhlI ACTAGT 2 cut(s) 772, 2684
AjiI CACGTC 3 cut(s) 1946, 2032, 8428
AjnI CCWGG 7 cut(s) 521, 3315, 3786, 4784, 4813, 4873, 7533
AjuI GAANNNNNNNTTGG 2 cut(s) 2726, 2758
AleI CACNNNNGTG 2 cut(s) 1948, 6372
Alw21I GWGCWC 6 cut(s) 453, 2301, 3892, 4075, 5511, 6299
AlwNI CAGNNNCTG 1 cut(s) 2984
Ama87I CYCGRG 3 cut(s) 439, 452, 1963
Aor13HI TCCGGA 3 cut(s) 2120, 2254, 5503
Aor51HI AGCGCT 1 cut(s) 7343
ApaI GGGCCC 1 cut(s) 5175
ArsI GACNNNNNNTTYG 8 cut(s) 1696, 1728, 1780, 1812, 2852, 2884, 7763, 7795
AseI ATTAAT 4 cut(s) 1221, 3765, 4955, 6566
Asp700I GAANNNNTTC 7 cut(s) 2250, 2558, 5016, 5343, 5466, 6029, 8544
Asp718I GGTACC 1 cut(s) 858
AspA2I CCTAGG 1 cut(s) 8525
AspLEI GCGC 5 cut(s) 391, 544, 7339, 7344, 7779
AsuC2I CCSGG 3 cut(s) 2564, 6818, 8182
AsuII TTCGAA 2 cut(s) 670, 958
AvaI CYCGRG 3 cut(s) 439, 452, 1963
AvaII GGWCC 9 cut(s) 436, 752, 2512, 2860, 5032, 6073, 6733, 7283, 7728
AvrII CCTAGG 1 cut(s) 8525
AxyI CCTNAGG 3 cut(s) 432, 6423, 7231
BaeGI GKGCMC 3 cut(s) 55, 2824, 5175
BaeI ACNNNNGTAYC 4 cut(s) 1176, 1209, 4236, 4269
BalI TGGCCA 1 cut(s) 2763
BamHI GGATCC 2 cut(s) 3017, 4106
BanI GGYRCC 5 cut(s) 388, 858, 1081, 2821, 7696
BanII GRGCYC 7 cut(s) 585, 2301, 3892, 5175, 5511, 6975, 7327
BauI CACGAG 2 cut(s) 5609, 7263
BbrPI CACGTG 1 cut(s) 1802
BbsI GAAGAC 4 cut(s) 1341, 2378, 2610, 6602
Bbv12I GWGCWC 6 cut(s) 453, 2301, 3892, 4075, 5511, 6299
BbvCI CCTCAGC 2 cut(s) 5817, 6993
BceAI ACGGC 3 cut(s) 432, 586, 5411
BcgI CGANNNNNNTGC 6 cut(s) 430, 464, 1683, 1717, 6359, 6393
BciT130I CCWGG 7 cut(s) 523, 3317, 3788, 4786, 4815, 4875, 7535
BciVI GTATCC 2 cut(s) 4460, 8035
BclI TGATCA 2 cut(s) 2221, 7626
BcnI CCSGG 3 cut(s) 2564, 6818, 8182
BcuI ACTAGT 2 cut(s) 772, 2684
BfoI RGCGCY 3 cut(s) 392, 7345, 7780
BfuAI ACCTGC 2 cut(s) 3337, 5821
BfuI GTATCC 2 cut(s) 4460, 8035
BglII AGATCT 1 cut(s) 4405
BlnI CCTAGG 1 cut(s) 8525
BmcAI AGTACT 1 cut(s) 8213
Bme18I GGWCC 9 cut(s) 436, 752, 2512, 2860, 5032, 6073, 6733, 7283, 7728
BmeT110I CYCGRG 3 cut(s) 439, 452, 1963
BmgBI CACGTC 3 cut(s) 1946, 2032, 8428
BmrI ACTGGG 3 cut(s) 58, 6718, 8280
BmuI ACTGGG 3 cut(s) 58, 6718, 8280
BoxI GACNNNNGTC 1 cut(s) 6470
BpiI GAAGAC 4 cut(s) 1341, 2378, 2610, 6602
BplI GAGNNNNNCTC 2 cut(s) 435, 467
BpmI CTGGAG 4 cut(s) 16, 4158, 6512, 8122
Bpu10I CCTNAGC 5 cut(s) 1629, 3880, 5817, 6993, 7833
Bpu14I TTCGAA 2 cut(s) 670, 958
BpuEI CTTGAG 7 cut(s) 2472, 3906, 3962, 4289, 4427, 5603, 7367
BpuMI CCSGG 3 cut(s) 2564, 6818, 8182
Bsa29I ATCGAT 1 cut(s) 4470
BsaAI YACGTR 1 cut(s) 1802
BsaBI GATNNNNATC 6 cut(s) 1830, 3564, 4410, 6363, 7518, 8052
BsaHI GRCGYC 3 cut(s) 234, 389, 5549
BsaI GGTCTC 2 cut(s) 3554, 7097
BsaWI WCCGGW 5 cut(s) 2120, 2254, 2395, 4452, 5503
Bse118I RCCGGY 1 cut(s) 5
Bse21I CCTNAGG 3 cut(s) 432, 6423, 7231
Bse8I GATNNNNATC 6 cut(s) 1830, 3564, 4410, 6363, 7518, 8052
BseAI TCCGGA 3 cut(s) 2120, 2254, 5503
BseBI CCWGG 7 cut(s) 523, 3317, 3788, 4786, 4815, 4875, 7535
BseCI ATCGAT 1 cut(s) 4470
BseJI GATNNNNATC 6 cut(s) 1830, 3564, 4410, 6363, 7518, 8052
BseRI GAGGAG 9 cut(s) 54, 259, 324, 848, 1355, 1981, 2150, 6858, 7673
BseSI GKGCMC 3 cut(s) 55, 2824, 5175
BseYI CCCAGC 2 cut(s) 3719, 7761
BsgI GTGCAG 6 cut(s) 1038, 3723, 3878, 5409, 7227, 7962
Bsh1236I CGCG 1 cut(s) 8088
Bsh1285I CGRYCG 1 cut(s) 466
BshNI GGYRCC 5 cut(s) 388, 858, 1081, 2821, 7696
BshVI ATCGAT 1 cut(s) 4470
BsiEI CGRYCG 1 cut(s) 466
BsiHKAI GWGCWC 6 cut(s) 453, 2301, 3892, 4075, 5511, 6299
BsiHKCI CYCGRG 3 cut(s) 439, 452, 1963
BsmBI CGTCTC 4 cut(s) 520, 609, 3443, 4503
BsmI GAATGC 4 cut(s) 2728, 3422, 4001, 6106
Bso31I GGTCTC 2 cut(s) 3554, 7097
BsoBI CYCGRG 3 cut(s) 439, 452, 1963
Bsp119I TTCGAA 2 cut(s) 670, 958
Bsp120I GGGCCC 1 cut(s) 5171
Bsp13I TCCGGA 3 cut(s) 2120, 2254, 5503
Bsp1407I TGTACA 3 cut(s) 1162, 3109, 7054
Bsp19I CCATGG 4 cut(s) 1255, 2897, 5538, 6091
BspDI ATCGAT 1 cut(s) 4470
BspEI TCCGGA 3 cut(s) 2120, 2254, 5503
BspFNI CGCG 1 cut(s) 8088
BspHI TCATGA 3 cut(s) 3448, 4488, 6826
BspMAI CTGCAG 3 cut(s) 3334, 6607, 7512
BspMI ACCTGC 2 cut(s) 3337, 5821
BspQI GCTCTTC 4 cut(s) 732, 1503, 3015, 6253
BspT104I TTCGAA 2 cut(s) 670, 958
BspT107I GGYRCC 5 cut(s) 388, 858, 1081, 2821, 7696
BspTNI GGTCTC 2 cut(s) 3554, 7097
BsrFI RCCGGY 1 cut(s) 5
BsrGI TGTACA 3 cut(s) 1162, 3109, 7054
BssAI RCCGGY 1 cut(s) 5
BssNAI GTATAC 3 cut(s) 6706, 7006, 7527
BssNI GRCGYC 3 cut(s) 234, 389, 5549
BssSI CACGAG 2 cut(s) 5609, 7263
Bst1107I GTATAC 3 cut(s) 6706, 7006, 7527
Bst2BI CACGAG 2 cut(s) 5609, 7263
Bst2UI CCWGG 7 cut(s) 523, 3317, 3788, 4786, 4815, 4875, 7535
BstACI GRCGYC 3 cut(s) 234, 389, 5549
BstAPI GCANNNNNTGC 4 cut(s) 5522, 6935, 7135, 7844
BstAUI TGTACA 3 cut(s) 1162, 3109, 7054
BstBAI YACGTR 1 cut(s) 1802
BstBI TTCGAA 2 cut(s) 670, 958
BstDSI CCRYGG 4 cut(s) 1255, 2897, 5538, 6091
BstEII GGTNACC 3 cut(s) 8, 2941, 7755
BstENI CCTNNNNNAGG 1 cut(s) 933
BstFNI CGCG 1 cut(s) 8088
BstH2I RGCGCY 3 cut(s) 392, 7345, 7780
BstHHI GCGC 5 cut(s) 391, 544, 7339, 7344, 7779
BstMCI CGRYCG 1 cut(s) 466
BstNI CCWGG 7 cut(s) 523, 3317, 3788, 4786, 4815, 4875, 7535
BstPAI GACNNNNGTC 1 cut(s) 6470
BstPI GGTNACC 3 cut(s) 8, 2941, 7755
BstSLI GKGCMC 3 cut(s) 55, 2824, 5175
BstUI CGCG 1 cut(s) 8088
BstV2I GAAGAC 4 cut(s) 1341, 2378, 2610, 6602
BstXI CCANNNNNNTGG 5 cut(s) 1262, 1950, 5585, 5987, 7773
BstZ17I GTATAC 3 cut(s) 6706, 7006, 7527
Bsu15I ATCGAT 1 cut(s) 4470
Bsu36I CCTNAGG 3 cut(s) 432, 6423, 7231
BsuI GTATCC 2 cut(s) 4460, 8035
BsuTUI ATCGAT 1 cut(s) 4470
BtgI CCRYGG 4 cut(s) 1255, 2897, 5538, 6091
BtgZI GCGATG 1 cut(s) 7286
BtrI CACGTC 3 cut(s) 1946, 2032, 8428
BtsI GCAGTG 4 cut(s) 2434, 2637, 3042, 6387
BveI ACCTGC 2 cut(s) 3337, 5821
CaiI CAGNNNCTG 1 cut(s) 2984
CciI TCATGA 3 cut(s) 3448, 4488, 6826
CfoI GCGC 5 cut(s) 391, 544, 7339, 7344, 7779
Cfr10I RCCGGY 1 cut(s) 5
ClaI ATCGAT 1 cut(s) 4470
CseI GACGC 2 cut(s) 3425, 5557
CspCI CAANNNNNGTGG 4 cut(s) 759, 794, 1788, 1823
DinI GGCGCC 1 cut(s) 390
DraI TTTAAA 6 cut(s) 126, 2496, 2611, 4459, 5806, 7303
DraIII CACNNNGTG 1 cut(s) 4079
DrdI GACNNNNNNGTC 1 cut(s) 4517
DseDI GACNNNNNNGTC 1 cut(s) 4517
EaeI YGGCCR 2 cut(s) 3, 2761
EciI GGCGGA 2 cut(s) 14, 139
Ecl136II GAGCTC 3 cut(s) 2299, 3890, 5509
Eco24I GRGCYC 7 cut(s) 585, 2301, 3892, 5175, 5511, 6975, 7327
Eco31I GGTCTC 2 cut(s) 3554, 7097
Eco32I GATATC 2 cut(s) 825, 5911
Eco47I GGWCC 9 cut(s) 436, 752, 2512, 2860, 5032, 6073, 6733, 7283, 7728
Eco47III AGCGCT 1 cut(s) 7343
Eco53kI GAGCTC 3 cut(s) 2299, 3890, 5509
Eco72I CACGTG 1 cut(s) 1802
Eco81I CCTNAGG 3 cut(s) 432, 6423, 7231
Eco88I CYCGRG 3 cut(s) 439, 452, 1963
Eco91I GGTNACC 3 cut(s) 8, 2941, 7755
EcoICRI GAGCTC 3 cut(s) 2299, 3890, 5509
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoO109I RGGNCCY 4 cut(s) 436, 752, 2860, 5032
EcoO65I GGTNACC 3 cut(s) 8, 2941, 7755
EcoRI GAATTC 2 cut(s) 954, 6611
EcoRII CCWGG 7 cut(s) 521, 3315, 3786, 4784, 4813, 4873, 7533
EcoRV GATATC 2 cut(s) 825, 5911
EcoT22I ATGCAT 4 cut(s) 646, 3422, 5518, 7140
EcoT38I GRGCYC 7 cut(s) 585, 2301, 3892, 5175, 5511, 6975, 7327
EgeI GGCGCC 1 cut(s) 390
EheI GGCGCC 1 cut(s) 390
Esp3I CGTCTC 4 cut(s) 520, 609, 3443, 4503
FalI AAGNNNNNCTT 8 cut(s) 1173, 1205, 1482, 1514, 2994, 3026, 7005, 7037
FauI CCCGC 2 cut(s) 256, 405
FauNDI CATATG 5 cut(s) 5383, 6643, 7140, 7333, 7623
FbaI TGATCA 2 cut(s) 2221, 7626
FblI GTMKAC 6 cut(s) 5080, 6705, 7005, 7526, 7935, 8118
FriOI GRGCYC 7 cut(s) 585, 2301, 3892, 5175, 5511, 6975, 7327
FspI TGCGCA 1 cut(s) 7338
GlaI GCGC 5 cut(s) 390, 543, 7338, 7343, 7778
GsaI CCCAGC 2 cut(s) 3723, 7765
GsuI CTGGAG 4 cut(s) 16, 4158, 6512, 8122
HaeII RGCGCY 3 cut(s) 392, 7345, 7780
HgaI GACGC 2 cut(s) 3425, 5557
HhaI GCGC 5 cut(s) 391, 544, 7339, 7344, 7779
Hin1I GRCGYC 3 cut(s) 234, 389, 5549
Hin6I GCGC 5 cut(s) 389, 542, 7337, 7342, 7777
HinP1I GCGC 5 cut(s) 389, 542, 7337, 7342, 7777
HincII GTYRAC 5 cut(s) 2307, 2755, 2917, 7936, 8080
HindII GTYRAC 5 cut(s) 2307, 2755, 2917, 7936, 8080
HindIII AAGCTT 7 cut(s) 479, 947, 2282, 2490, 5778, 7703, 7804
HpaI GTTAAC 1 cut(s) 2755
Hpy99I CGWCG 1 cut(s) 1950
HpyCH4IV ACGT 8 cut(s) 234, 513, 1015, 1781, 1801, 1945, 2031, 8427
HpySE526I ACGT 8 cut(s) 234, 513, 1015, 1781, 1801, 1945, 2031, 8427
Hsp92I GRCGYC 3 cut(s) 234, 389, 5549
HspAI GCGC 5 cut(s) 389, 542, 7337, 7342, 7777
KasI GGCGCC 1 cut(s) 388
Kpn2I TCCGGA 3 cut(s) 2120, 2254, 5503
KpnI GGTACC 1 cut(s) 862
Ksp22I TGATCA 2 cut(s) 2221, 7626
KspAI GTTAAC 1 cut(s) 2755
LguI GCTCTTC 4 cut(s) 732, 1503, 3015, 6253
MaeII ACGT 8 cut(s) 234, 513, 1015, 1781, 1801, 1945, 2031, 8427
MfeI CAATTG 6 cut(s) 1560, 2099, 2290, 2802, 4620, 7950
MlsI TGGCCA 1 cut(s) 2763
MluNI TGGCCA 1 cut(s) 2763
Mly113I GGCGCC 1 cut(s) 389
Mox20I TGGCCA 1 cut(s) 2763
Mph1103I ATGCAT 4 cut(s) 646, 3422, 5518, 7140
MroI TCCGGA 3 cut(s) 2120, 2254, 5503
MroXI GAANNNNTTC 7 cut(s) 2250, 2558, 5016, 5343, 5466, 6029, 8544
MscI TGGCCA 1 cut(s) 2763
Msp20I TGGCCA 1 cut(s) 2763
MspA1I CMGCKG 2 cut(s) 4285, 8396
MteI GCGCNGCGC 1 cut(s) 7340
MunI CAATTG 6 cut(s) 1560, 2099, 2290, 2802, 4620, 7950
Mva1269I GAATGC 4 cut(s) 2728, 3422, 4001, 6106
MvaI CCWGG 7 cut(s) 523, 3317, 3788, 4786, 4815, 4875, 7535
MvnI CGCG 1 cut(s) 8088
NarI GGCGCC 1 cut(s) 389
NciI CCSGG 3 cut(s) 2564, 6818, 8182
NcoI CCATGG 4 cut(s) 1255, 2897, 5538, 6091
NdeI CATATG 5 cut(s) 5383, 6643, 7140, 7333, 7623
NmeAIII GCCGAG 2 cut(s) 497, 592
NsbI TGCGCA 1 cut(s) 7338
NsiI ATGCAT 4 cut(s) 646, 3422, 5518, 7140
NspV TTCGAA 2 cut(s) 670, 958
OliI CACNNNNGTG 2 cut(s) 1948, 6372
PaeI GCATGC 4 cut(s) 983, 2458, 3395, 3875
PaeR7I CTCGAG 1 cut(s) 452
PagI TCATGA 3 cut(s) 3448, 4488, 6826
PciI ACATGT 5 cut(s) 1326, 1840, 3079, 4896, 7738
PciSI GCTCTTC 4 cut(s) 732, 1503, 3015, 6253
PcsI WCGNNNNNNNCGW 2 cut(s) 390, 459
PctI GAATGC 4 cut(s) 2728, 3422, 4001, 6106
PdmI GAANNNNTTC 7 cut(s) 2250, 2558, 5016, 5343, 5466, 6029, 8544
PflFI GACNNNGTC 1 cut(s) 5561
PflMI CCANNNNNTGG 2 cut(s) 4916, 6111
PluTI GGCGCC 1 cut(s) 392
PmaCI CACGTG 1 cut(s) 1802
PmlI CACGTG 1 cut(s) 1802
Ppu21I YACGTR 1 cut(s) 1802
PpuMI RGGWCCY 4 cut(s) 436, 752, 2860, 5032
PscI ACATGT 5 cut(s) 1326, 1840, 3079, 4896, 7738
PshAI GACNNNNGTC 1 cut(s) 6470
PshBI ATTAAT 4 cut(s) 1221, 3765, 4955, 6566
PsiI TTATAA 1 cut(s) 7457
Psp124BI GAGCTC 3 cut(s) 2301, 3892, 5511
Psp5II RGGWCCY 4 cut(s) 436, 752, 2860, 5032
Psp6I CCWGG 7 cut(s) 521, 3315, 3786, 4784, 4813, 4873, 7533
PspCI CACGTG 1 cut(s) 1802
PspEI GGTNACC 3 cut(s) 8, 2941, 7755
PspFI CCCAGC 2 cut(s) 3719, 7761
PspGI CCWGG 7 cut(s) 521, 3315, 3786, 4784, 4813, 4873, 7533
PspOMI GGGCCC 1 cut(s) 5171
PspPPI RGGWCCY 4 cut(s) 436, 752, 2860, 5032
PsrI GAACNNNNNNTAC 2 cut(s) 7413, 7445
PstI CTGCAG 3 cut(s) 3334, 6607, 7512
PstNI CAGNNNCTG 1 cut(s) 2984
PsyI GACNNNGTC 1 cut(s) 5561
PvuII CAGCTG 1 cut(s) 4285
SacI GAGCTC 3 cut(s) 2301, 3892, 5511
SalI GTCGAC 1 cut(s) 7934
SapI GCTCTTC 4 cut(s) 732, 1503, 3015, 6253
ScaI AGTACT 1 cut(s) 8213
SfoI GGCGCC 1 cut(s) 390
Sfr274I CTCGAG 1 cut(s) 452
SfuI TTCGAA 2 cut(s) 670, 958
SinI GGWCC 9 cut(s) 436, 752, 2512, 2860, 5032, 6073, 6733, 7283, 7728
SlaI CTCGAG 1 cut(s) 452
SmlI CTYRAG 8 cut(s) 452, 2487, 3921, 3941, 4268, 4442, 5618, 7382
SmoI CTYRAG 8 cut(s) 452, 2487, 3921, 3941, 4268, 4442, 5618, 7382
SpeI ACTAGT 2 cut(s) 772, 2684
SphI GCATGC 4 cut(s) 983, 2458, 3395, 3875
SspDI GGCGCC 1 cut(s) 388
SspI AATATT 4 cut(s) 785, 963, 3763, 7373
SstI GAGCTC 3 cut(s) 2301, 3892, 5511
TaiI ACGT 8 cut(s) 237, 516, 1018, 1784, 1804, 1948, 2034, 8430
TatI WGTACW 8 cut(s) 1162, 2656, 3109, 6853, 7037, 7054, 7202, 8211
TauI GCSGC 7 cut(s) 187, 190, 193, 503, 1111, 2056, 3398
TspGWI ACGGA 5 cut(s) 2010, 4728, 4987, 6513, 7204
Tth111I GACNNNGTC 1 cut(s) 5561
Van91I CCANNNNNTGG 2 cut(s) 4916, 6111
VpaK11BI GGWCC 9 cut(s) 436, 752, 2512, 2860, 5032, 6073, 6733, 7283, 7728
VspI ATTAAT 4 cut(s) 1221, 3765, 4955, 6566
XagI CCTNNNNNAGG 1 cut(s) 933
XbaI TCTAGA 4 cut(s) 2695, 3145, 8065, 8314
XcmI CCANNNNNNNNNTGG 4 cut(s) 659, 1262, 4765, 8129
XhoI CTCGAG 1 cut(s) 452
XmaJI CCTAGG 1 cut(s) 8525
XmiI GTMKAC 6 cut(s) 5080, 6705, 7005, 7526, 7935, 8118
XmnI GAANNNNTTC 7 cut(s) 2250, 2558, 5016, 5343, 5466, 6029, 8544
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 1 cut(s) 8213
Zsp2I ATGCAT 4 cut(s) 646, 3422, 5518, 7140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.