AT4G13750

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000582
Physical Location & Seq
Forward (+)
7975064 .. 7987687
12624 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G13750.1

Sequence Viewer

Length: 8190 bp
ATGCAAGGGAACCACGACGGTTCGTGGTCTCTACACCCCTCCACCAACAATGGAAGCGGCAGAGCCAACGGAAACATCAACATCAACACCGTTCCCGGTGGAGGATACCTTCCTCAGGCAAATCCTGTCTTTCCCAATTTCAATCAACCCATTAGATACCCAATTCCTCAGTTTCCGGCGAATTTTTACCGCCCTAATTTCCCTGACTTCTCTCTCGGAAACCCTAATTTCCAACCCCATCAAAATCTCAACTTCCTTCATCAACAAATCCCTCACCAATATGGCTCCGCTGCTAATCACTTCCTTCAAAACCATAACCAAAACAGCTTCTCTTTCCCACCTCAATCTATACCTAATAATGATATCAGTATCTCTCAGAATCACGGAGCTTTCGAAAACTCTTCATTGAAACGAAGACGACAAGAGGAGGTTGTACAAGTGACTGATGTGGTTCCAAAATCTAATTTTGCTTCCGGTGAGAGTGCTAATAACTCCTTCAGTGTATCTCTACCGATCCCTATAGCAACTGATGATAGTGGTGTGTCTCGAGTCCATGGAGAGAAGTCATCTGGAAAACCCAAGCGCAAAGTTGATGTCTTGCGGATTGATAAGGCTGTTAACAAGACGCGTAAATTATTTGTTGCTGCTGGAGAGAGTGTTTCTTCGACTAGAGTGTCGAGAGCTGTTTTAGAAGAGCTTCAAGCTGATTCTTGGCGTTCCTTGGGTGTGCAAATGCAAGATGTTCCTTCTCTTCGTCAACTTATGGCCATTGAAGGCAAGATCAATGCATTTATTCACTGCTTCGTTGGGGCTAGAAGAATTGTGACCCTGCATGATTTGGAAGTGGCAATATGCCGGAACGAGTTTGTTGATTCTTTCGATGATCTGGAATTGGGACCTTTGCTGCAGCATCCACTGGTTTTGCTGTATTTTCCATCGATATCCAGTTCTACTGGACCAGTTAAGATCACTAGTGAGGAGATAATATCATTTCTTGATAGCTATCTGCACACTTATATGACAGAAGATGTTAAGCTCGATGAATTTCTGAATTTTGTTGCAAGTCAAAAGTCAGTTACAAGCAAGGAAAAGCTTGGTGTGCGTATTCAGAGCTTGCGGATGTATGTATCTTTCATTCTAGACGCGAAGAGACAAGAAGGTGAAACACTGAAAGTCTTACTGACTGAGCTGCATCAGAAGTATCACATCCCCTCATCAAAGAAACAACAGCGAGATAAATCTCTAACTGTCTCTGAGCGAGCTGACTCATTTGCTTTACATCATAAGGATTATTGTGGCAAGCATATAAGATTTGATTCTTCAAGCTCAGATGAAAATGATAATGTTTATGAGGTTAGAAATCTTAATAGTTCTGACCATATCAATAGTTGTCCATATCCATCTGTTGCGGAAGAGATGAAGCGTCTTGGGGGCTCCAATAAGAAAAGGAAGGGTGAAAGACGTAATCATGAAAAATCTGATTCCTCCAAACTGCTTAGAAAATCCCCCTCTAAATTACAAGGACATGCGAAACAAGAGATACCTAAATTGGCTGATGATTCTGAAGCTAAGAAGGTTTTCAGTGTCGATGAGGCTGATTTTACACTTTCTGAAGGAGATTTAAGATTGTTCATTTCAACTTGGAAGGACACATGTAAAGAGCTAAGCATTTCAACGTTTGTCGAGAAAATGTTGTCTTTTTACAACTTGGGGGGCTCTGAAGGAAGAGCTCAGATTAAAAGAGCTAAAGCGATGTCATCATTTCCGTTTGTTGGATTACTAAATGTCGCTGTAACTTCATTAAGACGTGGTATGTGGGATAGCATATATGATAATTTTCAAATGACAAGCCTAAGTGATACGACTAATACAGGCTCAGGAAATCAAGTTGGTGAAATTAACCCAATTGAAAACAGTGAGTTAAGCAAGACTCAGCATGTTATGCCTCCTACACACTGTAACACTGTCGAAGAAATTATTAGAAGGCTTTCCTTGTATTTTGAGCATGATCTTTCTGGAGCGAAGCACATTGGTATCTTTAGGAAGCTACAGACTTGCGAGAATTTGTTGGCAGAGCAATTTCAAGTACAGGATTTTGAGTCTCTTGGTTGGGGTGGGTTTTTTGCTTTCTTGGAAAAACATATGTTACTGCTACCAACACAACTTCAAAGGTTTCTATCTAGAGAATTACAGGAAGAGTTTCCTCTGGAGGTCCACGTGAATGAGAATCTGTTGACTCTTCTGCTTTCGCAAGCTTCTGAATTTTCAAGTGATAAAGTACTATCTAGACAAACATTAGCTCGACTGGTTGCAGAACAATTTCCATCAATCAGTTTCAAGGTTGTCGGAAGAGATTCAGAGGAAAATTTCTCTGAAATCATTGGTAAGAAGAAGTCTTCTTCTAAATGTGTCCTCTTTTCTGCAACATTGTTGGGAGCTGAAAACTCTTTGACAAGTAAATATCTGGAAGAATCCCTGACAGTGGGAAATGATACTGAAGCAAGAAGCACCACTCTTAATGCTGTTGCATCCAAAGAGGTTTTAGATGTTTTGCTTAGGGTTCCGTTGTTGTCAGACTTGAATTCATGGTGTCACTGGGATCTTAGGTATGCTCCACAGTTTGGTCCTCTTATGGGCTGTTTAAATGAGATTAATTCAACAGATCTGTTGTGTCTAGTGACAAGGGATGGTAAGATTATCAGAGCAGATCCTTCTGCAACAGCAGATTCATTCTTAGAGGCTGCTCTTCAAGGATCTGCTTACCGTACTGCTGCACAGTTGTTGTCATTGATATCATTGAATGGAAGAACACATCTACCATTTTCCCTTCTAAAATGCTATGCAAAACGTGCATTTGAAGTTTTTTTTTATAACTATTCCGAGGAGATGGAGCTAAATGATAGGAATTCTCTTGTGCAAATGCATGGGCCAGAAAAGCTCAGCACTTCTTTTGACAAAGTGATAGTTGTAGGAGAGAAAGCTAAAGTGGCTAAACGTGACTATGCTGCCTCTAAGTTTCTTCTTGATTGTCTGGGCTATCTACCTGGGGAGTTTCGCAGTTTAGTTGTTGATATCTTGCTACCAGGACTACGTTCTGTTGTTAAAGATGCTCCTACAAGAGTTTTGTCTGCATGCGAGCAAACAGAGCAACGCATCATGCTGCATGATGCCGGATTGCTGCTAGGCATTGTTGAGTGGATTAGTGATTACCATAAGTTTTGCTCATCATGTTCTCCAAACTCTTCAATAGTGGAGAATGCTTCGTCCAACTTAGATTCTGGCGCAGGTTTTGTGCAAAACGAATTGGAGGACCCAGTTCAGACCAAACAAAGATGCATGATCGTATCAGAGAAGTCGTGCGAATACAAAGAAGAACCTCATGAATCTTGTCACACTTTTGGTGGTTCAGGGATTTTATGTGATTCTGTTGGGGAGGCTTTCACCCAGACTGCACCTGAATTTTATGATAATCGAGCCTCTGTTATTGATTCAATCAGACGGGATGAGTTTGGGTTGGATTTAACTTCTTCTGGTTCTGAGATGAGTATGCTGCAGAAACAACATGCTCGGTTAGGAAGAGCACTTCAGTGTTTGTCCCAAGAACTGTATTCTCAAGATTCACACTTCATTCTTGAACTTGTTCAAAATGCTGATGACAATAAATACCCTGAACACGTGGAACCCACACTCACATTCATTCTTCAAAAGACCGGGATTGTTGTTTTAAACAACGAGTGTGGCTTCATGCCTGAGAACATTCGGGCCCTGTGTGATGTTGGTCAATCCACAAAGAAAGGATCTGGTGGATACATAGGGAAGAAAGGAATTGGCTTCAAGTCAGTGTTTCGGGTTTCTGATGCTCCTGAGATCCACTCAAATGGTTTCCATTTCAAGTTTGATATAAGTGAGGGTCAGATTGGATATATTTTACCGACTGTTGTGCCTCCTCATGATATTGAATCGCTTAGCAGCATGTTATCTGGCCGTGCTTTACACCTGAAGGATGCAGGATGGAACACTTGCATTACACTTCCTTTCAGAGCCATTGATTCCGAAAGAACAACAGTGAATCACATTGAACCTATGTTTTCAGACCTTCACCCTTCTTTATTACTCTTCCTACATCGCCTCCAGTGCATAGTATACAGAAACGTGCTTGACGATTCTCTCTTGGTCATGAGGAAAGAGGTTGTGAGCAAGAATATCGTAAAGGTTTCATGTGGGGAAAATAGCATGACATGGTTTGTGGCATCAGAGAAATTAAAGGCTACCAATCTTCGTGATGATGTTCAGACAACAGAAATTTCCATAGGATTCACTCTTGACATGCTGGAAGATGGAACTTACAGATCATGTATGATTCAAGAACCTGTTTTTGCTTTTCTTCCTCTAAGAACTTATGGTTTGAAATTTATTATACAAGGGGATTTCATTCTTACATCATCAAGGGAGGATGTTGATGAGGATAGTCCTTGGAACCAGTGGCTGTTGTCAGAATTTCCGGGTTTGTTTGTGGATGCGTTAAGGTCCTTTTGCAGTCTTCCTTCTTTCACCCAGAATCTGGGTAAAGGTGTCTCCTCATACATGCAGCTTGTACCTCTCGTCGGGGAAGTGCATGGGTTCTTTTCTTCTCTCCCTCGTTCTATTATATCTAGATTGAGAACAACCAATTGCTTGCTGCTTGAGGGAGACGGTGAAGAATGGGTTCCTCCTTGCAAGGTTTTAAGAAACTGGAATGAAAAGATTAGGGTTCTTCTTAAGGATGGATTGCTTCAGGAGCATCTTGCTTTGGGCTTTTTGGACAAAGATATAGTTTTGTCAGATTCCCTGTCAAGGGCACTCGGCATTGAAGACTATGGACCGAAGACTTTGGTGCAAATTCTTTCTTCATTGAGTCACAAGAATGGTTGTCTACAATCAATGGGCTTTACATGGTTATCGTCTATTCTTACTGAACTTTACCTACTATTCCGTTCTTCTGGGCATGGTAATGTAGAGTTAGGTATAGATAAGAGTCTTATAGATGACCTTCACAAGATCCCATTTATTCCCCTCTCAAATGGTAAGTTCACCTCTTTAGATGAAGGCGCAGTGTGGTTGCACCATGACACCACTGGGTTAGATCTTGGTGATGTATTTGAAGCATTTCCTGTGTTATATGGAAATCTCCGAACCATTGATCATTCCCTTCTTTTGGCGTCTTCTGTTGATGAAAAATCCTCTGTGGATGACCTTGTAAACATGCTTTGTGCAATTGGCGTTCAAAAGCTGTCAGCACATGAAATCGTTAAAGCTCATATATTACCAGCCTTTGAGGCAAGGAGTACAGGTGCAGTGGACGGTTTAATGGTTGATTACTTATGCTTTGTGATGACACATCTACGATCTGGCTGTCATATTTGTCTGAAGGAGAGGAAGTACATTATTTCTGAGTTGAGAAGCAAAGCTCTGGTATTATCAAATTATGGGTTGAAACAGCTAGGTGAAGGGTCAATTCATTTCGGTGAAGAATATGGAAACCAGGTCAACATGAAGAAGCTTACCAAAAACTTGGATATATCATGGCATGTGGTTGATGGTACCTACTTGAAACATCCAGCATCAAAATTTTATGCATGCGGATTGAAGGAGTGGCGGGAATTTTTTCAAGAGATTGGAATAGCTGATTTTGTTCAAGTAGTTCAAGTTGAAAAGAGCATTGCTGAATTCTATTCTGTTTCACACTGTGAAAAGTATGATATCAACTTGTTATCTCCTGATTTAACTGTTAAAGACTGGGAATCCCCGGAACTAGTTGATCTCTTGTCTCTCTTGCACAAAAGTAATGGCCGTAAAGGTTGCAAGTATCTTTTGGAAGTCCTTGATAGACTGTGGGACGATTGTTACTATGACAAAACAACTGTTAACTATAACTCGGGTACGCATGGTATCATCAGATCATCAGAATCTTCATTTATGAGGGTAATTTGTGATTCTCTATGGATAGTTTCAAGCATGGACAGCAAATTGCATCTTTCAAAAGACCTCTATCATGATTGTGATGATGTGCAGTCAATACTTGGCATGAATGCTCCCTATGCAGTTCCTACGGTTACAAGTGTCAAGTTACTTAGTGATATTGGTTTTAAGACCAAAGTTTCCCTCGATGATGCTTTGGAAGTCCTAGAATCTTGGGTACACTGTGGAGACTCTTTCAAATCAAGCATCTCTCAGATTACCAGATTTTACAAATATTTGTGGAATGAAATGGCTGATTCAAAACAGAAAATTACTGAAAAGCTTCATACTCTTCCGTCTGTGTTTGTACCACATGGAATTGCAAGTAGGCAGAATGATATGATATCGGGAATATTCTTGTCACTTGATGATGTTTACTGGAATGATTCTGCTGGCGTTTTAGATGAGATAAAAGAGATCAGTTCGCAGATCAGCAGTGTTGTGGAACCATTGCGTAGAAAAACATTGGGCAATATCTATCCAGGTCTACATGACTTTTTTGTGAATGGGTGTGGAGTACCTGAGACGCCTTCGTTTCAAGAGTACCTTAAAATTCTAGGGCAGTTTGCACATAATGTGTCACCCTCATCTGCCGCCAAGGCTGTCTTCAAAATTTTCCTGAAGTGGAGTGATGACTTGAACTCTGGCAAATCTTCCGAAGATGTTATTCATTTTAAAGAGAGACTTTCAGAACTGGAGTACACTGTACTCCCTACTGAAAATGATAAGTGGGTTTCCTTGCACTCCTCGTTTGGTCTCGTATGTTGGTGTGATAATGAGAAGTTAAAGAAGAGATTTAAAAACAAGGATAAAATTGAGTTTATTAGCTTTGGGGAAAATGATGACGAAGGGCAAGAAGTGCTTCAAACAAAAGTGTCTGGGCTCATGCACAGTTTGGGCATTCCAAGTATTTCTGAGGTGGTAAAGCGTGAAGCGAAATATGAAGGTTTGCAAGATAATACTGTAACAGTGTCACTTGTTAACTGGGCTCTGCCTTATGCACAGCGGTATATCTTTACTCTTCATCATGAGAAGTATACCCAAACAAAAAAGACAGTCCATAGTCAAGTCAAACGTCTACAAGTCTTTGTTGTTGATAAGTTATCCTATAGGAATGTCATACCGCAATATGGCATCAGCTCTAAAAAGGAGTTCAAATGCAGTTCTCTTCTGCAGGATAAAGCTCTGTACACAACACCAAGTCTGGATTCCCATTCCTTGTTCATGGAACTGTCTCGTTTGTTTTTCAACGGAGTGCCTGATCTGCATTTGGCAAATTTCCTTCACTTGATCAAAACAATGGCAGAATCTGGGTTGAGCGAGGAGCAAATGGAATCCTTCATTCTGAACAGTCAGAAAGTTCATCAGGTTCCTGATGGTGAAGAGATCTGGTCCCTCAAATCTGCTGTTAAAGCGAAGAAGAAAGCTGGAATAAGCTTGAGCTGGTTACCTTCAAGTTCTAAAACAAGACATGGTTCTAGCAAGACCAACACTGATGATTCTAAACAAGAGCTGGACACTAGTAGCAGCAAAGAGGATGTAACAGAGGCTCTTGAAGAAAAAATACCGATTGAGATGACCAATACCAACTTGGTTTCTGGATATGATAATTGTGCAGGCACAAGTTCACGAGCTAGTGAGCCAAACCCGTTGCATTCTATGCATATGATTAGTGGCTCAACCTCAGGGAATCAGGCTGCTATGCATCTCAATCCAAATCTTCCTCATGAATGGAACAATTCCTTCACAGCTAATTTCAGCGATAGAGACCAGCTTCATACAGGCACACCTTGGGCTGCACAAGCGCAACAGACCGGTAGAAAAGGTGAAGAAATCGCTTACAGATACTTTGTTGCAAAATACGGCAATGAGGCACTGGTTAAATGGGTTAACGACCAGAGCGAAACCGGTTTACCTTACGACCTCATGATCGAAAACCGAGGTGGTAAGAAAGAGTACGTGGAGGTGAAAGCAACGGTATCGACACGGAAAGACTATTTCAACTTGACAGTGAGGGAATGGCAATTTGCAAATGAGAAAGGAGAGAGTTACATAATAGCTCATGTTTTGTTAGGAAACAGTAATGCAATCCTCACACAGCATAGAAACCCGGTCAAGTTATGCCAAGAAGGTCATCTCCGGTTATTGGTTCTCATGCCCAACCAGAGAAACGAGGTCAACGTTACATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

2729

Amino Acids

306.34

Weight (kDa)

5.95

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 1203 - 1294 1.1e-08 Sacsin domain
NOV_C PF13020 2608 - 2694 1.4e-20 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2871
AasI GACNNNNNNGTC 1 cut(s) 673
Acc36I ACCTGC 1 cut(s) 3275
Acc65I GGTACC 1 cut(s) 5579
AccB1I GGYRCC 1 cut(s) 5579
AccB7I CCANNNNNTGG 2 cut(s) 2621, 4561
AccI GTMKAC 5 cut(s) 4143, 4912, 6484, 7034, 7075
AccII CGCG 2 cut(s) 628, 1145
AclI AACGTT 2 cut(s) 1676, 8178
AclWI GGATC 7 cut(s) 508, 2607, 2702, 2761, 3805, 3862, 5032
AcoI YGGCCR 3 cut(s) 765, 3982, 5827
AcvI CACGTG 2 cut(s) 2218, 3676
AcyI GRCGYC 2 cut(s) 5198, 6524
AdeI CACNNNGTG 1 cut(s) 5726
AflII CTTAAG 1 cut(s) 4757
AflIII ACRYGT 3 cut(s) 626, 1652, 3673
AgeI ACCGGT 2 cut(s) 7811, 7904
AhlI ACTAGT 3 cut(s) 971, 5791, 7517
AjiI CACGTC 1 cut(s) 1808
AjnI CCWGG 4 cut(s) 3043, 3082, 5520, 6478
AjuI GAANNNNNNNTTGG 4 cut(s) 6587, 6619, 7189, 7221
AleI CACNNNNGTG 1 cut(s) 3586
Alw21I GWGCWC 2 cut(s) 1732, 3583
AlwI GGATC 7 cut(s) 508, 2607, 2702, 2761, 3805, 3862, 5032
AlwNI CAGNNNCTG 3 cut(s) 4486, 4561, 7307
Ama87I CYCGRG 2 cut(s) 546, 5914
AoxI GGCC 5 cut(s) 765, 2927, 3762, 3982, 5827
ApaI GGGCCC 1 cut(s) 3766
ArsI GACNNNNNNTTYG 2 cut(s) 579, 611
AseI ATTAAT 1 cut(s) 2652
AsiGI ACCGGT 2 cut(s) 7811, 7904
Asp718I GGTACC 1 cut(s) 5579
AspLEI GCGC 4 cut(s) 585, 3284, 5090, 7804
AsuC2I CCSGG 5 cut(s) 96, 3712, 4503, 5786, 8108
AsuII TTCGAA 1 cut(s) 393
AvaI CYCGRG 2 cut(s) 546, 5914
AvaII GGWCC 8 cut(s) 896, 956, 2212, 2624, 3310, 4527, 4859, 7389
AxyI CCTNAGG 2 cut(s) 114, 7681
BaeGI GKGCMC 2 cut(s) 3766, 4840
BaeI ACNNNNGTAYC 2 cut(s) 2017, 2050
BalI TGGCCA 1 cut(s) 767
BanI GGYRCC 1 cut(s) 5579
BanII GRGCYC 6 cut(s) 1436, 1718, 1732, 3766, 6882, 6988
BarI GAAGNNNNNNTAC 2 cut(s) 7545, 7577
BauI CACGAG 1 cut(s) 7626
BbrPI CACGTG 2 cut(s) 2218, 3676
BbsI GAAGAC 7 cut(s) 421, 2388, 4532, 4857, 4871, 5193, 6595
Bbv12I GWGCWC 2 cut(s) 1732, 3583
BceAI ACGGC 3 cut(s) 3969, 5814, 7876
BcgI CGANNNNNNTGC 6 cut(s) 3922, 3956, 4186, 4220, 7959, 7993
BciT130I CCWGG 4 cut(s) 3045, 3084, 5522, 6480
BciVI GTATCC 2 cut(s) 98, 3800
BclI TGATCA 2 cut(s) 5179, 7287
BcnI CCSGG 5 cut(s) 96, 3712, 4503, 5786, 8108
BcuI ACTAGT 3 cut(s) 971, 5791, 7517
BfmI CTRYAG 6 cut(s) 519, 905, 2048, 3551, 7105, 7169
BfrI CTTAAG 1 cut(s) 4757
BfuAI ACCTGC 1 cut(s) 3275
BfuI GTATCC 2 cut(s) 98, 3800
BglI GCCNNNNNGGC 2 cut(s) 5315, 6596
BglII AGATCT 3 cut(s) 2662, 5122, 7383
BlpI GCTNAGC 3 cut(s) 1664, 2939, 3965
BmcAI AGTACT 1 cut(s) 2280
Bme1390I CCNGG 9 cut(s) 96, 3045, 3084, 3712, 4503, 5522, 5786, 6480, 8108
Bme18I GGWCC 8 cut(s) 896, 956, 2212, 2624, 3310, 4527, 4859, 7389
BmeT110I CYCGRG 2 cut(s) 546, 5914
BmgBI CACGTC 1 cut(s) 1808
BmrFI CCNGG 9 cut(s) 96, 3045, 3084, 3712, 4503, 5522, 5786, 6480, 8108
BmrI ACTGGG 5 cut(s) 2605, 3308, 5124, 5785, 6991
BmuI ACTGGG 5 cut(s) 2605, 3308, 5124, 5785, 6991
BpiI GAAGAC 7 cut(s) 421, 2388, 4532, 4857, 4871, 5193, 6595
BplI GAGNNNNNCTC 2 cut(s) 3857, 3889
BpmI CTGGAG 5 cut(s) 669, 2037, 2228, 4115, 6713
Bpu10I CCTNAGC 2 cut(s) 1876, 2555
Bpu1102I GCTNAGC 3 cut(s) 1664, 2939, 3965
Bpu14I TTCGAA 1 cut(s) 393
BpuEI CTTGAG 3 cut(s) 3597, 4703, 7456
BpuMI CCSGG 5 cut(s) 96, 3712, 4503, 5786, 8108
Bsa29I ATCGAT 1 cut(s) 938
BsaAI YACGTR 3 cut(s) 2218, 3676, 7957
BsaBI GATNNNNATC 1 cut(s) 1002
BsaHI GRCGYC 2 cut(s) 5198, 6524
BsaI GGTCTC 3 cut(s) 33, 6758, 7758
BsaJI CCNNGG 9 cut(s) 553, 720, 2880, 3044, 4472, 5784, 6594, 7787, 7936
BsaWI WCCGGW 4 cut(s) 473, 7811, 7904, 8136
BsaXI ACNNNNNCTCC 8 cut(s) 642, 672, 4113, 4143, 5314, 5344, 5402, 5432
Bse118I RCCGGY 2 cut(s) 7811, 7904
Bse21I CCTNAGG 2 cut(s) 114, 7681
Bse3DI GCAATG 3 cut(s) 5697, 6446, 7870
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 4 cut(s) 3045, 3084, 5522, 6480
BseCI ATCGAT 1 cut(s) 938
BseDI CCNNGG 9 cut(s) 553, 720, 2880, 3044, 4472, 5784, 6594, 7787, 7936
BseJI GATNNNNATC 1 cut(s) 1002
BseMI GCAATG 3 cut(s) 5697, 6446, 7870
BseRI GAGGAG 7 cut(s) 440, 992, 2897, 3936, 4567, 6733, 7334
BseSI GKGCMC 2 cut(s) 3766, 4840
BsgI GTGCAG 7 cut(s) 992, 2757, 3435, 5352, 6068, 7632, 7779
Bsh1236I CGCG 2 cut(s) 628, 1145
BshFI GGCC 5 cut(s) 767, 2929, 3764, 3984, 5829
BshNI GGYRCC 1 cut(s) 5579
BshTI ACCGGT 2 cut(s) 7811, 7904
BshVI ATCGAT 1 cut(s) 938
BsiHKAI GWGCWC 2 cut(s) 1732, 3583
BsiHKCI CYCGRG 2 cut(s) 546, 5914
BslFI GGGAC 4 cut(s) 909, 3580, 5888, 7375
BsmBI CGTCTC 2 cut(s) 4683, 6515
BsmFI GGGAC 4 cut(s) 909, 3580, 5888, 7375
BsmI GAATGC 4 cut(s) 3262, 6073, 6897, 7651
BsnI GGCC 5 cut(s) 767, 2929, 3764, 3984, 5829
Bso31I GGTCTC 3 cut(s) 33, 6758, 7758
BsoBI CYCGRG 2 cut(s) 546, 5914
Bsp119I TTCGAA 1 cut(s) 393
Bsp120I GGGCCC 1 cut(s) 3762
Bsp1286I GDGCHC 8 cut(s) 1436, 1718, 1732, 3583, 3766, 4840, 6882, 6988
Bsp1407I TGTACA 2 cut(s) 433, 7185
Bsp1720I GCTNAGC 3 cut(s) 1664, 2939, 3965
Bsp19I CCATGG 1 cut(s) 553
BspANI GGCC 5 cut(s) 767, 2929, 3764, 3984, 5829
BspDI ATCGAT 1 cut(s) 938
BspFNI CGCG 2 cut(s) 628, 1145
BspHI TCATGA 8 cut(s) 1468, 3379, 3949, 4176, 6031, 7024, 7723, 7923
BspMAI CTGCAG 3 cut(s) 909, 3555, 7173
BspMI ACCTGC 1 cut(s) 3275
BspPI GGATC 7 cut(s) 508, 2607, 2702, 2761, 3805, 3862, 5032
BspQI GCTCTTC 4 cut(s) 687, 1720, 2751, 3571
BspT104I TTCGAA 1 cut(s) 393
BspT107I GGYRCC 1 cut(s) 5579
BspTI CTTAAG 1 cut(s) 4757
BspTNI GGTCTC 3 cut(s) 33, 6758, 7758
BsrDI GCAATG 3 cut(s) 5697, 6446, 7870
BsrFI RCCGGY 2 cut(s) 7811, 7904
BsrGI TGTACA 2 cut(s) 433, 7185
BssAI RCCGGY 2 cut(s) 7811, 7904
BssECI CCNNGG 9 cut(s) 553, 720, 2880, 3044, 4472, 5784, 6594, 7787, 7936
BssNAI GTATAC 2 cut(s) 4144, 7035
BssNI GRCGYC 2 cut(s) 5198, 6524
BssSI CACGAG 1 cut(s) 7626
BssT1I CCWWGG 5 cut(s) 553, 720, 4472, 6594, 7787
Bst1107I GTATAC 2 cut(s) 4144, 7035
Bst2BI CACGAG 1 cut(s) 7626
Bst2UI CCWGG 4 cut(s) 3045, 3084, 5522, 6480
BstACI GRCGYC 2 cut(s) 5198, 6524
BstAFI CTTAAG 1 cut(s) 4757
BstAPI GCANNNNNTGC 4 cut(s) 1942, 2849, 6856, 7657
BstAUI TGTACA 2 cut(s) 433, 7185
BstBAI YACGTR 3 cut(s) 2218, 3676, 7957
BstBI TTCGAA 1 cut(s) 393
BstDSI CCRYGG 1 cut(s) 553
BstEII GGTNACC 1 cut(s) 7443
BstENI CCTNNNNNAGG 1 cut(s) 113
BstFNI CGCG 2 cut(s) 628, 1145
BstHHI GCGC 4 cut(s) 585, 3284, 5090, 7804
BstNI CCWGG 4 cut(s) 3045, 3084, 5522, 6480
BstPI GGTNACC 1 cut(s) 7443
BstSCI CCNGG 9 cut(s) 94, 3043, 3082, 3710, 4501, 5520, 5784, 6478, 8106
BstSFI CTRYAG 6 cut(s) 519, 905, 2048, 3551, 7105, 7169
BstSLI GKGCMC 2 cut(s) 3766, 4840
BstUI CGCG 2 cut(s) 628, 1145
BstV2I GAAGAC 7 cut(s) 421, 2388, 4532, 4857, 4871, 5193, 6595
BstX2I RGATCY 9 cut(s) 2599, 2662, 2707, 2753, 3797, 3867, 5037, 5122, 7383
BstXI CCANNNNNNTGG 2 cut(s) 3878, 5551
BstYI RGATCY 9 cut(s) 2599, 2662, 2707, 2753, 3797, 3867, 5037, 5122, 7383
BstZ17I GTATAC 2 cut(s) 4144, 7035
Bsu15I ATCGAT 1 cut(s) 938
Bsu36I CCTNAGG 2 cut(s) 114, 7681
BsuI GTATCC 2 cut(s) 98, 3800
BsuRI GGCC 5 cut(s) 767, 2929, 3764, 3984, 5829
BsuTUI ATCGAT 1 cut(s) 938
BtgI CCRYGG 1 cut(s) 553
BtgZI GCGATG 2 cut(s) 1766, 4109
BtrI CACGTC 1 cut(s) 1808
BtsI GCAGTG 4 cut(s) 796, 5097, 5340, 6439
BveI ACCTGC 1 cut(s) 3275
CaiI CAGNNNCTG 3 cut(s) 4486, 4561, 7307
CciI TCATGA 8 cut(s) 1468, 3379, 3949, 4176, 6031, 7024, 7723, 7923
CfoI GCGC 4 cut(s) 585, 3284, 5090, 7804
Cfr10I RCCGGY 2 cut(s) 7811, 7904
ClaI ATCGAT 1 cut(s) 938
CseI GACGC 5 cut(s) 634, 1151, 1412, 5187, 6532
CsiI ACCWGGT 1 cut(s) 5520
CspAI ACCGGT 2 cut(s) 7811, 7904
CspCI CAANNNNNGTGG 4 cut(s) 903, 938, 3718, 3753
DraI TTTAAA 4 cut(s) 2643, 3726, 6673, 6796
DraIII CACNNNGTG 1 cut(s) 5726
DrdI GACNNNNNNGTC 1 cut(s) 673
DseDI GACNNNNNNGTC 1 cut(s) 673
EaeI YGGCCR 3 cut(s) 765, 3982, 5827
Ecl136II GAGCTC 1 cut(s) 1730
Eco130I CCWWGG 5 cut(s) 553, 720, 4472, 6594, 7787
Eco24I GRGCYC 6 cut(s) 1436, 1718, 1732, 3766, 6882, 6988
Eco31I GGTCTC 3 cut(s) 33, 6758, 7758
Eco32I GATATC 6 cut(s) 364, 942, 2793, 3073, 5740, 6342
Eco47I GGWCC 8 cut(s) 896, 956, 2212, 2624, 3310, 4527, 4859, 7389
Eco53kI GAGCTC 1 cut(s) 1730
Eco72I CACGTG 2 cut(s) 2218, 3676
Eco81I CCTNAGG 2 cut(s) 114, 7681
Eco88I CYCGRG 2 cut(s) 546, 5914
Eco91I GGTNACC 1 cut(s) 7443
EcoICRI GAGCTC 1 cut(s) 1730
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoO109I RGGNCCY 4 cut(s) 896, 3310, 3763, 4527
EcoO65I GGTNACC 1 cut(s) 7443
EcoRI GAATTC 3 cut(s) 2581, 2905, 5705
EcoRII CCWGG 4 cut(s) 3043, 3082, 5520, 6478
EcoRV GATATC 6 cut(s) 364, 942, 2793, 3073, 5740, 6342
EcoT14I CCWWGG 5 cut(s) 553, 720, 4472, 6594, 7787
EcoT22I ATGCAT 6 cut(s) 790, 2925, 3338, 5617, 7662, 7704
EcoT38I GRGCYC 6 cut(s) 1436, 1718, 1732, 3766, 6882, 6988
ErhI CCWWGG 5 cut(s) 553, 720, 4472, 6594, 7787
Esp3I CGTCTC 2 cut(s) 4683, 6515
FalI AAGNNNNNCTT 8 cut(s) 6528, 6560, 6587, 6619, 6666, 6698, 6843, 6875
FaqI GGGAC 4 cut(s) 909, 3580, 5888, 7375
FauI CCCGC 1 cut(s) 5628
FauNDI CATATG 2 cut(s) 2142, 7662
FbaI TGATCA 2 cut(s) 5179, 7287
FblI GTMKAC 5 cut(s) 4143, 4912, 6484, 7034, 7075
FriOI GRGCYC 6 cut(s) 1436, 1718, 1732, 3766, 6882, 6988
GlaI GCGC 4 cut(s) 584, 3283, 5089, 7803
GsuI CTGGAG 5 cut(s) 669, 2037, 2228, 4115, 6713
HaeIII GGCC 5 cut(s) 767, 2929, 3764, 3984, 5829
HgaI GACGC 5 cut(s) 634, 1151, 1412, 5187, 6532
HhaI GCGC 4 cut(s) 585, 3284, 5090, 7804
Hin1I GRCGYC 2 cut(s) 5198, 6524
Hin6I GCGC 4 cut(s) 583, 3282, 5088, 7802
HinP1I GCGC 4 cut(s) 583, 3282, 5088, 7802
HincII GTYRAC 8 cut(s) 619, 758, 2235, 5527, 5905, 6979, 7888, 8176
HindII GTYRAC 8 cut(s) 619, 758, 2235, 5527, 5905, 6979, 7888, 8176
HindIII AAGCTT 5 cut(s) 1091, 2253, 5537, 6278, 7432
HpaI GTTAAC 4 cut(s) 619, 5905, 6979, 7888
Hpy99I CGWCG 2 cut(s) 20, 4607
Hsp92I GRCGYC 2 cut(s) 5198, 6524
HspAI GCGC 4 cut(s) 583, 3282, 5088, 7802
KpnI GGTACC 1 cut(s) 5583
Ksp22I TGATCA 2 cut(s) 5179, 7287
KspAI GTTAAC 4 cut(s) 619, 5905, 6979, 7888
LguI GCTCTTC 4 cut(s) 687, 1720, 2751, 3571
MabI ACCWGGT 1 cut(s) 5520
MfeI CAATTG 3 cut(s) 1905, 4669, 5253
MflI RGATCY 9 cut(s) 2599, 2662, 2707, 2753, 3797, 3867, 5037, 5122, 7383
MhlI GDGCHC 8 cut(s) 1436, 1718, 1732, 3583, 3766, 4840, 6882, 6988
MlsI TGGCCA 1 cut(s) 767
MluI ACGCGT 1 cut(s) 626
MluNI TGGCCA 1 cut(s) 767
MlyI GAGTC 8 cut(s) 558, 1259, 1924, 2108, 2230, 4903, 5023, 6182
MmeI TCCRAC 5 cut(s) 256, 1753, 2326, 3291, 3495
Mox20I TGGCCA 1 cut(s) 767
Mph1103I ATGCAT 6 cut(s) 790, 2925, 3338, 5617, 7662, 7704
MscI TGGCCA 1 cut(s) 767
MslI CAYNNNNRTG 9 cut(s) 279, 1016, 2220, 3586, 3876, 4902, 4989, 5502, 6036
Msp20I TGGCCA 1 cut(s) 767
MspA1I CMGCKG 2 cut(s) 290, 7003
MspCI CTTAAG 1 cut(s) 4757
MspR9I CCNGG 9 cut(s) 96, 3045, 3084, 3712, 4503, 5522, 5786, 6480, 8108
MunI CAATTG 3 cut(s) 1905, 4669, 5253
Mva1269I GAATGC 4 cut(s) 3262, 6073, 6897, 7651
MvaI CCWGG 4 cut(s) 3045, 3084, 5522, 6480
MvnI CGCG 2 cut(s) 628, 1145
NciI CCSGG 5 cut(s) 96, 3712, 4503, 5786, 8108
NcoI CCATGG 1 cut(s) 553
NdeI CATATG 2 cut(s) 2142, 7662
NmeAIII GCCGAG 1 cut(s) 4821
NsiI ATGCAT 6 cut(s) 790, 2925, 3338, 5617, 7662, 7704
NspV TTCGAA 1 cut(s) 393
OliI CACNNNNGTG 1 cut(s) 3586
PaeI GCATGC 2 cut(s) 3135, 5619
PaeR7I CTCGAG 1 cut(s) 546
PagI TCATGA 8 cut(s) 1468, 3379, 3949, 4176, 6031, 7024, 7723, 7923
PciI ACATGT 1 cut(s) 1652
PciSI GCTCTTC 4 cut(s) 687, 1720, 2751, 3571
PcsI WCGNNNNNNNCGW 4 cut(s) 390, 4158, 7896, 8175
PctI GAATGC 4 cut(s) 3262, 6073, 6897, 7651
PflMI CCANNNNNTGG 2 cut(s) 2621, 4561
PinAI ACCGGT 2 cut(s) 7811, 7904
PleI GAGTC 8 cut(s) 557, 1259, 1924, 2107, 2230, 4902, 5022, 6182
PmaCI CACGTG 2 cut(s) 2218, 3676
PmlI CACGTG 2 cut(s) 2218, 3676
PpsI GAGTC 8 cut(s) 557, 1259, 1924, 2107, 2230, 4902, 5022, 6182
Ppu21I YACGTR 3 cut(s) 2218, 3676, 7957
PpuMI RGGWCCY 3 cut(s) 896, 3310, 4527
PscI ACATGT 1 cut(s) 1652
PshBI ATTAAT 1 cut(s) 2652
PsiI TTATAA 1 cut(s) 2871
Psp124BI GAGCTC 1 cut(s) 1732
Psp1406I AACGTT 2 cut(s) 1676, 8178
Psp5II RGGWCCY 3 cut(s) 896, 3310, 4527
Psp6I CCWGG 4 cut(s) 3043, 3082, 5520, 6478
PspCI CACGTG 2 cut(s) 2218, 3676
PspEI GGTNACC 1 cut(s) 7443
PspGI CCWGG 4 cut(s) 3043, 3082, 5520, 6478
PspOMI GGGCCC 1 cut(s) 3762
PspPPI RGGWCCY 3 cut(s) 896, 3310, 4527
PsrI GAACNNNNNNTAC 2 cut(s) 4947, 4979
PstI CTGCAG 3 cut(s) 909, 3555, 7173
PstNI CAGNNNCTG 3 cut(s) 4486, 4561, 7307
PsuI RGATCY 9 cut(s) 2599, 2662, 2707, 2753, 3797, 3867, 5037, 5122, 7383
RseI CAYNNNNRTG 9 cut(s) 279, 1016, 2220, 3586, 3876, 4902, 4989, 5502, 6036
SacI GAGCTC 1 cut(s) 1732
SapI GCTCTTC 4 cut(s) 687, 1720, 2751, 3571
ScaI AGTACT 1 cut(s) 2280
SchI GAGTC 8 cut(s) 558, 1259, 1924, 2108, 2230, 4903, 5023, 6182
ScrFI CCNGG 9 cut(s) 96, 3045, 3084, 3712, 4503, 5522, 5786, 6480, 8108
SduI GDGCHC 8 cut(s) 1436, 1718, 1732, 3583, 3766, 4840, 6882, 6988
SexAI ACCWGGT 1 cut(s) 5520
SfcI CTRYAG 6 cut(s) 519, 905, 2048, 3551, 7105, 7169
Sfr274I CTCGAG 1 cut(s) 546
SfuI TTCGAA 1 cut(s) 393
SinI GGWCC 8 cut(s) 896, 956, 2212, 2624, 3310, 4527, 4859, 7389
SlaI CTCGAG 1 cut(s) 546
SmiMI CAYNNNNRTG 9 cut(s) 279, 1016, 2220, 3586, 3876, 4902, 4989, 5502, 6036
SmlI CTYRAG 5 cut(s) 546, 3612, 4682, 4757, 7435
SmoI CTYRAG 5 cut(s) 546, 3612, 4682, 4757, 7435
SpeI ACTAGT 3 cut(s) 971, 5791, 7517
SphI GCATGC 2 cut(s) 3135, 5619
SspI AATATT 2 cut(s) 6233, 6351
SstI GAGCTC 1 cut(s) 1732
StyD4I CCNGG 9 cut(s) 94, 3043, 3082, 3710, 4501, 5520, 5784, 6478, 8106
StyI CCWWGG 5 cut(s) 553, 720, 4472, 6594, 7787
TaqII GACCGA 1 cut(s) 4876
TatI WGTACW 8 cut(s) 433, 2086, 2278, 5324, 5418, 6696, 6703, 7185
TauI GCSGC 2 cut(s) 60, 6593
TspGWI ACGGA 8 cut(s) 84, 399, 1755, 2553, 4961, 6282, 7263, 7999
Van91I CCANNNNNTGG 2 cut(s) 2621, 4561
Vha464I CTTAAG 1 cut(s) 4757
VpaK11BI GGWCC 8 cut(s) 896, 956, 2212, 2624, 3310, 4527, 4859, 7389
VspI ATTAAT 1 cut(s) 2652
XagI CCTNNNNNAGG 1 cut(s) 113
XbaI TCTAGA 4 cut(s) 1138, 2180, 2285, 4652
XcmI CCANNNNNNNNNTGG 2 cut(s) 5111, 7585
XhoI CTCGAG 1 cut(s) 546
XmiI GTMKAC 5 cut(s) 4143, 4912, 6484, 7034, 7075
ZrmI AGTACT 1 cut(s) 2280
Zsp2I ATGCAT 6 cut(s) 790, 2925, 3338, 5617, 7662, 7704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.