Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000821

Physical Location & Seq

Genomic Coordinates Forward (+)

25122404 .. 25125025

Gene Structure 2622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67150.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGGGATCTCAAGACCCTTGTATATACAGAGTGCCAAGCCAGTTGCGTGAAGTGAATCCAGAAGCTTATAGACCTCGGATGCTTCTCATCGGCCCTCTTACTCATTCCAAGAAACCTAAAGTTCATACGGATTCAAGGTATCTAGAATATAAGATGATGGAGGACCAAAAGGTGTTGTACAAAGACGCTTTCACCAAAAGGCTAGATACTGATATTGCTATTCTTGAGGATATGAAGACCACCATAAAAGACGAAGAAGTAAATATTCGAGCAAGCTATGCGGTATCGACTGCATGGATATTATCCGATATATTCGTGGAGCTTATACTTAACGATTCAATTTTTATCGTGGAGTTCATTCTCAGAATGTATGAAAGTCATGAAAAAATTGGTGACATGATTGTGGACAAACCTTTTTACACTTCCACGGTTCTTGATGACCTTACCTTGCTCGAGAATCAGCTTCCTTACTTCTGTTTAAGTAAGTTGTTAAACCCCATTACAAAGAGATTTTGTGGAGATCAGTCGCTGGACCAAGTCATCCTCCAGTTATTTTCAGTCAATGATAGTGGCATGATCAATGAGAATACAAAGTTCAATCACTTCACAGATTTATTCCGGTGTGTTTACAAGGAATCACTTGGCCAGAATCTAGAGTTGAACAACTCGAAAAGCCAGATCGTGGATATGAAGAGCGCGAATATGCTATACAGTGTAGGAGTGGACTTCAAGGTAGTGAAGCGTGAGTATTCACTGAATGTATCATTCGAGGAAGGTTGCTTAATATTGCCGAGTTTTCCTGCCGATGAATCTTCTAATATCATCCTTAGAAATGTCATCGCATATGAGCAATGCCATGATCCTGAAAATGCCTTTACTACAAATTACATAAATTTCATGAATTTCCTTATTACCTCCGATGAAGACGTGGCTATACTCACTTCAGCAGGAGTGCTAACAAACGGTGTGGGGCGGTCAAGCATGGTACTGAAGATGGTGAATAACTTAGCTATAGGAGTGTTGCTATCGAATCAGAGCCAATATCACGACATTGTTGAGAAACTCAACATTCACCATAGTTCTCGTAGGAAAAGGATATGGGCGAAACTAAGAAAAGTCTACTTCAGCGACTTATGGACGACAACAGCTACGTTAGCTGCCATATCTCTTTTGCTACTGACTCTAGCTGGGACAGTGGCTTCCATTTTTCAAGCTATCAAGAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF247

Protein Analysis

408

Amino Acids

46.56

Weight (kDa)

5.7

Isoelectric Point (pI)

36.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF247	PF03140	8 - 166	1.3e-35	Plant protein of unknown function
DUF247	PF03140	160 - 350	3e-47	Plant protein of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65985 AT1G65985 AT1G67150 AT1G67150 AT1G67150 AT1G67150 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G44930 AT3G60470
fragaria_vesca	FvH4_7g09691 FvH4_7g09700 FvH4_7g09710
malus_domestica	MD00G1041300.v1.1
prunus_persica	Prupe.2G124600_v2.0.a1 Prupe.2G124800_v2.0.a1 Prupe.2G124900_v2.0.a1 Prupe.2G125100_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125400_v2.0.a1 Prupe.2G125400_v2.0.a1
pyrus_communis	pycom02g17910 pycom02g18260 pycom02g18340
rosa_chinensis	RchiOBHm_Chr1g0346611 RchiOBHm_Chr1g0346641 RchiOBHm_Chr1g0346651 RchiOBHm_Chr1g0346791 RchiOBHm_Chr4g0388531
rosa_laevigata	RLG00000010045 RLG00000010060 RLG00000028784 RLG00000028788 RLG00000028789
rosa_multiflora	Rmu_sc0001241.1_g000008 Rmu_sc0001241.1_g000009 Rmu_sc0002357.1_g000013 Rmu_sc0002640.1_g000020 Rmu_sc0005167.1_g000027 Rmu_sc0006463.1_g000009 Rmu_sc0006463.1_g000017
rosa_roxburghii	Rroxscaffold_4G00308200 Rroxscaffold_4G00308310 Rroxscaffold_4G00308390 Rroxscaffold_5G00334860 Rroxscaffold_5G00334990
rosa_rugosa	Rorug01G0181400 Rorug01G0181700 Rorug01G0182300 Rorug03G0318400
rosa_samantha	Rh1AG200700 Rh1BG166900 Rh1BG167000 Rh1BG167700 Rh1DG197800 Rh1DG198500 Rh4BG016600 Rh4DG017100
rosa_wichuraiana	Rw1G016810 Rw1G016820 Rw4G001580 Rw4G001590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	682
AccI	GTMKAC	1 cut(s)	1119
AccII	CGCG	1 cut(s)	698
AciI	CCGC	2 cut(s)	281, 973
AclWI	GGATC	2 cut(s)	13, 854
AcoI	YGGCCR	1 cut(s)	643
AcsI	RAATTY	2 cut(s)	892, 901
AcuI	CTGAAG	3 cut(s)	927, 1010, 1108
AfaI	GTAC	2 cut(s)	179, 987
AfiI	CCNNNNNNNGG	1 cut(s)	682
AgsI	TTSAA	6 cut(s)	135, 339, 598, 661, 730, 1211
AjiI	CACGTC	1 cut(s)	928
AlwI	GGATC	2 cut(s)	13, 854
AlwNI	CAGNNNCTG	1 cut(s)	529
Ama87I	CYCGRG	1 cut(s)	452
AoxI	GGCC	2 cut(s)	91, 643
ApeKI	GCWGC	1 cut(s)	1157
ApoI	RAATTY	2 cut(s)	892, 901
AspLEI	GCGC	1 cut(s)	698
AspS9I	GGNCC	3 cut(s)	92, 163, 532
AsuHPI	GGTGA	4 cut(s)	184, 404, 1009, 1064
AvaI	CYCGRG	1 cut(s)	452
AvaII	GGWCC	2 cut(s)	163, 532
BalI	TGGCCA	1 cut(s)	645
BbsI	GAAGAC	2 cut(s)	242, 930
BbvI	GCAGC	1 cut(s)	1144
BccI	CCATC	2 cut(s)	151, 988
BclI	TGATCA	1 cut(s)	576
BfaI	CTAG	4 cut(s)	143, 203, 653, 1184
BfmI	CTRYAG	1 cut(s)	1011
BisI	GCNGC	1 cut(s)	1158
BlsI	GCNGC	1 cut(s)	1159
Bme18I	GGWCC	2 cut(s)	163, 532
BmeT110I	CYCGRG	1 cut(s)	452
BmgBI	CACGTC	1 cut(s)	928
BmgT120I	GGNCC	3 cut(s)	92, 163, 532
BmsI	GCATC	1 cut(s)	69
BpiI	GAAGAC	2 cut(s)	242, 930
BpmI	CTGGAG	1 cut(s)	530
BpuEI	CTTGAG	1 cut(s)	245
BsaJI	CCNNGG	2 cut(s)	74, 426
BsaWI	WCCGGW	1 cut(s)	618
Bsc4I	CCNNNNNNNGG	1 cut(s)	682
Bse1I	ACTGG	2 cut(s)	40, 547
Bse3DI	GCAATG	1 cut(s)	857
BseDI	CCNNGG	2 cut(s)	74, 426
BseGI	GGATG	3 cut(s)	84, 540, 822
BseLI	CCNNNNNNNGG	1 cut(s)	682
BseMI	GCAATG	1 cut(s)	857
BseMII	CTCAG	1 cut(s)	376
BseNI	ACTGG	2 cut(s)	40, 547
BseXI	GCAGC	1 cut(s)	1144
BseYI	CCCAGC	1 cut(s)	1187
Bsh1236I	CGCG	1 cut(s)	698
BshFI	GGCC	2 cut(s)	93, 645
BsiHKCI	CYCGRG	1 cut(s)	452
BsiSI	CCGG	1 cut(s)	619
BslFI	GGGAC	1 cut(s)	1204
BslI	CCNNNNNNNGG	1 cut(s)	682
BsmFI	GGGAC	1 cut(s)	1204
BsnI	GGCC	2 cut(s)	93, 645
BsoBI	CYCGRG	1 cut(s)	452
Bsp1407I	TGTACA	1 cut(s)	177
Bsp143I	GATC	5 cut(s)	5, 520, 576, 678, 859
BspACI	CCGC	2 cut(s)	281, 973
BspANI	GGCC	2 cut(s)	93, 645
BspCNI	CTCAG	1 cut(s)	375
BspFNI	CGCG	1 cut(s)	698
BspHI	TCATGA	2 cut(s)	379, 897
BspPI	GGATC	2 cut(s)	13, 854
BspQI	GCTCTTC	1 cut(s)	686
BsrDI	GCAATG	1 cut(s)	857
BsrGI	TGTACA	1 cut(s)	177
BsrI	ACTGG	2 cut(s)	40, 547
BssECI	CCNNGG	2 cut(s)	74, 426
BssMI	GATC	5 cut(s)	5, 520, 576, 678, 859
Bst4CI	ACNGT	4 cut(s)	430, 713, 965, 1195
Bst6I	CTCTTC	1 cut(s)	686
BstAPI	GCANNNNNTGC	1 cut(s)	278
BstAUI	TGTACA	1 cut(s)	177
BstC8I	GCNNGC	1 cut(s)	274
BstDEI	CTNAG	4 cut(s)	362, 827, 1006, 1109
BstDSI	CCRYGG	1 cut(s)	426
BstF5I	GGATG	3 cut(s)	84, 540, 822
BstFNI	CGCG	1 cut(s)	698
BstHHI	GCGC	1 cut(s)	698
BstKTI	GATC	5 cut(s)	8, 523, 579, 681, 862
BstMBI	GATC	5 cut(s)	5, 520, 576, 678, 859
BstMWI	GCNNNNNNNGC	2 cut(s)	278, 1154
BstSFI	CTRYAG	1 cut(s)	1011
BstUI	CGCG	1 cut(s)	698
BstV1I	GCAGC	1 cut(s)	1144
BstV2I	GAAGAC	2 cut(s)	242, 930
BstX2I	RGATCY	1 cut(s)	5
BstYI	RGATCY	1 cut(s)	5
BsuRI	GGCC	2 cut(s)	93, 645
BtgI	CCRYGG	1 cut(s)	426
BtgZI	GCGATG	1 cut(s)	823
BtrI	CACGTC	1 cut(s)	928
BtsCI	GGATG	3 cut(s)	84, 540, 822
BtsIMutI	CAGTG	3 cut(s)	718, 752, 1200
Cac8I	GCNNGC	1 cut(s)	274
CaiI	CAGNNNCTG	1 cut(s)	529
CciI	TCATGA	2 cut(s)	379, 897
CfoI	GCGC	1 cut(s)	698
Cfr13I	GGNCC	3 cut(s)	92, 163, 532
CseI	GACGC	1 cut(s)	194
Csp6I	GTAC	2 cut(s)	178, 986
CspCI	CAANNNNNGTGG	6 cut(s)	415, 450, 550, 585, 948, 983
CviAII	CATG	7 cut(s)	294, 380, 397, 574, 857, 898, 982
CviQI	GTAC	2 cut(s)	178, 986
DdeI	CTNAG	4 cut(s)	362, 827, 1006, 1109
DpnI	GATC	5 cut(s)	7, 522, 578, 680, 861
DpnII	GATC	5 cut(s)	5, 520, 576, 678, 859
EaeI	YGGCCR	1 cut(s)	643
Eam1104I	CTCTTC	1 cut(s)	686
EarI	CTCTTC	1 cut(s)	686
Eco47I	GGWCC	2 cut(s)	163, 532
Eco57I	CTGAAG	3 cut(s)	927, 1010, 1108
Eco88I	CYCGRG	1 cut(s)	452
FaeI	CATG	7 cut(s)	297, 383, 400, 577, 860, 901, 985
FaqI	GGGAC	1 cut(s)	1204
FatI	CATG	7 cut(s)	293, 379, 396, 573, 856, 897, 981
FauNDI	CATATG	1 cut(s)	844
FbaI	TGATCA	1 cut(s)	576
FblI	GTMKAC	1 cut(s)	1119
Fnu4HI	GCNGC	1 cut(s)	1158
FokI	GGATG	3 cut(s)	91, 527, 809
Fsp4HI	GCNGC	1 cut(s)	1158
FspBI	CTAG	4 cut(s)	143, 203, 653, 1184
GlaI	GCGC	1 cut(s)	697
GluI	GCNGC	1 cut(s)	1158
GsaI	CCCAGC	1 cut(s)	1191
GsuI	CTGGAG	1 cut(s)	530
HaeIII	GGCC	2 cut(s)	93, 645
HapII	CCGG	1 cut(s)	619
HgaI	GACGC	1 cut(s)	194
HhaI	GCGC	1 cut(s)	698
Hin1II	CATG	7 cut(s)	297, 383, 400, 577, 860, 901, 985
Hin6I	GCGC	1 cut(s)	696
HinP1I	GCGC	1 cut(s)	696
HindIII	AAGCTT	1 cut(s)	63
HinfI	GANTC	9 cut(s)	55, 131, 335, 457, 635, 649, 809, 1030, 1180
HpaII	CCGG	1 cut(s)	619
HphI	GGTGA	4 cut(s)	184, 404, 1009, 1064
Hpy166II	GTNNAC	4 cut(s)	406, 628, 724, 1120
Hpy188I	TCNGA	5 cut(s)	78, 307, 365, 919, 1035
Hpy8I	GTNNAC	4 cut(s)	406, 628, 724, 1120
HpyAV	CCTTC	1 cut(s)	767
HpyCH4III	ACNGT	4 cut(s)	430, 713, 965, 1195
HpyCH4IV	ACGT	2 cut(s)	927, 1151
HpyCH4V	TGCA	1 cut(s)	293
HpyF10VI	GCNNNNNNNGC	2 cut(s)	278, 1154
HpyF3I	CTNAG	4 cut(s)	362, 827, 1006, 1109
HpySE526I	ACGT	2 cut(s)	927, 1151
Hsp92II	CATG	7 cut(s)	297, 383, 400, 577, 860, 901, 985
HspAI	GCGC	1 cut(s)	696
Ksp22I	TGATCA	1 cut(s)	576
Kzo9I	GATC	5 cut(s)	5, 520, 576, 678, 859
LguI	GCTCTTC	1 cut(s)	686
LmnI	GCTCC	1 cut(s)	319
Lsp1109I	GCAGC	1 cut(s)	1144
LweI	GCATC	1 cut(s)	69
MaeI	CTAG	4 cut(s)	143, 203, 653, 1184
MaeII	ACGT	2 cut(s)	927, 1151
MaeIII	GTNAC	1 cut(s)	392
MalI	GATC	5 cut(s)	7, 522, 578, 680, 861
MboI	GATC	5 cut(s)	5, 520, 576, 678, 859
MboII	GAAGA	6 cut(s)	247, 266, 703, 804, 935, 1003
MflI	RGATCY	1 cut(s)	5
MlsI	TGGCCA	1 cut(s)	645
MluCI	AATT	5 cut(s)	339, 387, 883, 892, 901
MluNI	TGGCCA	1 cut(s)	645
MlyI	GAGTC	1 cut(s)	1174
MnlI	CCTC	7 cut(s)	84, 105, 154, 220, 554, 763, 925
Mox20I	TGGCCA	1 cut(s)	645
MscI	TGGCCA	1 cut(s)	645
MseI	TTAA	4 cut(s)	330, 479, 491, 782
MslI	CAYNNNNRTG	1 cut(s)	401
Msp20I	TGGCCA	1 cut(s)	645
MspI	CCGG	1 cut(s)	619
MvnI	CGCG	1 cut(s)	698
MwoI	GCNNNNNNNGC	2 cut(s)	278, 1154
NdeI	CATATG	1 cut(s)	844
NdeII	GATC	5 cut(s)	5, 520, 576, 678, 859
NlaIII	CATG	7 cut(s)	297, 383, 400, 577, 860, 901, 985
NmeAIII	GCCGAG	1 cut(s)	816
NmuCI	GTSAC	1 cut(s)	392
PaeR7I	CTCGAG	1 cut(s)	452
PagI	TCATGA	2 cut(s)	379, 897
PciSI	GCTCTTC	1 cut(s)	686
PfeI	GAWTC	8 cut(s)	55, 131, 335, 457, 635, 649, 809, 1030
PflFI	GACNNNGTC	1 cut(s)	536
PflMI	CCANNNNNTGG	1 cut(s)	682
PkrI	GCNGC	1 cut(s)	1159
PleI	GAGTC	1 cut(s)	1174
PpsI	GAGTC	1 cut(s)	1174
PspFI	CCCAGC	1 cut(s)	1187
PspPI	GGNCC	3 cut(s)	92, 163, 532
PstNI	CAGNNNCTG	1 cut(s)	529
PsuI	RGATCY	1 cut(s)	5
PsyI	GACNNNGTC	1 cut(s)	536
RsaI	GTAC	2 cut(s)	179, 987
RsaNI	GTAC	2 cut(s)	178, 986
RseI	CAYNNNNRTG	1 cut(s)	401
SapI	GCTCTTC	1 cut(s)	686
SaqAI	TTAA	4 cut(s)	330, 479, 491, 782
SatI	GCNGC	1 cut(s)	1158
Sau3AI	GATC	5 cut(s)	5, 520, 576, 678, 859
Sau96I	GGNCC	3 cut(s)	92, 163, 532
SchI	GAGTC	1 cut(s)	1174
SfaNI	GCATC	1 cut(s)	69
SfcI	CTRYAG	1 cut(s)	1011
Sfr274I	CTCGAG	1 cut(s)	452
SinI	GGWCC	2 cut(s)	163, 532
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	1 cut(s)	401
SmlI	CTYRAG	3 cut(s)	9, 224, 452
SmoI	CTYRAG	3 cut(s)	9, 224, 452
Sse9I	AATT	5 cut(s)	339, 387, 883, 892, 901
SsiI	CCGC	2 cut(s)	281, 973
SspI	AATATT	2 cut(s)	265, 786
SspMI	CTAG	4 cut(s)	143, 203, 653, 1184
TaaI	ACNGT	4 cut(s)	430, 713, 965, 1195
TaiI	ACGT	2 cut(s)	930, 1154
TaqI	TCGA	6 cut(s)	268, 287, 453, 668, 768, 1028
TasI	AATT	5 cut(s)	339, 387, 883, 892, 901
TatI	WGTACW	1 cut(s)	177
TfiI	GAWTC	8 cut(s)	55, 131, 335, 457, 635, 649, 809, 1030
Tru1I	TTAA	4 cut(s)	330, 479, 491, 782
Tru9I	TTAA	4 cut(s)	330, 479, 491, 782
TscAI	CASTG	3 cut(s)	718, 759, 1200
TseFI	GTSAC	1 cut(s)	392
TseI	GCWGC	1 cut(s)	1157
Tsp45I	GTSAC	1 cut(s)	392
TspGWI	ACGGA	1 cut(s)	143
TspRI	CASTG	3 cut(s)	718, 759, 1200
Tth111I	GACNNNGTC	1 cut(s)	536
Van91I	CCANNNNNTGG	1 cut(s)	682
VpaK11BI	GGWCC	2 cut(s)	163, 532
XapI	RAATTY	2 cut(s)	892, 901
XbaI	TCTAGA	2 cut(s)	142, 652
XhoI	CTCGAG	1 cut(s)	452
XmiI	GTMKAC	1 cut(s)	1119
XspI	CTAG	4 cut(s)	143, 203, 653, 1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.