Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001241.1

Orthogroup ID

OG0000821

Physical Location & Seq

Genomic Coordinates Reverse (-)

32469 .. 35272

Gene Structure 2804 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001241.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

atgggcacgagaaccttttctccgcctgccaaaacaagaaacttccgatatactaatccttttcctttgaagggttttctgatggcaagttgcagtgctcgggtcaacaatggagttgctgtctctaccggcgttaattgggtttgcgttggcatggttggtccaggttgggctgttttcggtttgaacgaattgggtacggtggctttgtcaagtgtattactagaatttcctttcgggggaaggaataccagcagttctagttttaggaatactgtcacattctttggcactgattatagtttcgttttctccagggaaatcaagacttcggaaatggtagaacctcagagtgaacaaagagagaatgcacccgtattgttcttgcaggaatggtgtatctatagggttcccagccagctccgcaatgtagatgaagcagcatacactcctcaaacactttcaatagggcctttccaccatggaaatccaaaactgagggacatggaggcccataagaacaaatattatgagttgttttgcacacgttcttcgaaaagtgaggacgaactaaggagcttcatgatggatcatcgagaaacaattctaaattgttatgcaggtacctttaaatgtgagatcgactttttgaacctcatcctagttgacgcctgcttcataattgaactctttttgactaattctgaacaagaacaacataatgcaaattattatatactgagatcaccgtggctgaggaaaacggtggagagggacctgatactgttggaaaatcagcttccttattttcttcttcaaaagctatatgactttgccataccaaccttttccaatggccatcttggcaatggagaccaagcacaagttgggggacatgcccataaagatagcaccaacagtcagcaatattgcttcccttgcttccagcccggtgattttcaagagaactccatccaatctgaacctattcaacgtggcttatttattgaacttacctgtaagttttttaaggcatacactaagggaaaatctgtcaggaacggatttgagccgaaacacttcactgatttggttagacactttctatgtccatacgaggaactgttgtgggaagaaaattatgatcggcccgtcaaaattaaataccatgcaacaaagctgaaggttgcaggagtgaagtttatgccacttagagaaccatttgttataaaggaagaccctgtgttgacgtttaactcggcatgtttggcacataaggagttgaagcttacaagactttgggcagagtatgaggcaggatgcatttttcgaaacatcatggccttggaacaacttatgtatccaaaaaagccttatgtttgcagttatttttcgctgatgaaccaactcattaacactgaggaagatgtggatgttctgattgaggatggtgtaatcttcaacttgctaggcagcaaccaggcagtggtaaacatgattagttccttgtgtgagcagattaaggaggatcactcctgctatagtgagatctgtcaagacattaatagtcattataagacagtttggtaccaccccttggtaataacgagacaggtttacttcaaggatctttggagaggcagtacagctatactaggattcgttgtcctagttttcacaattcttcaatcccttcaggcatttgagttgctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF247

Protein Analysis

571

Amino Acids

65.73

Weight (kDa)

6.14

Isoelectric Point (pI)

48.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65985 AT1G65985 AT1G67150 AT1G67150 AT1G67150 AT1G67150 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G28580 AT2G44930 AT3G60470
fragaria_vesca	FvH4_7g09691 FvH4_7g09700 FvH4_7g09710
malus_domestica	MD00G1041300.v1.1
prunus_persica	Prupe.2G124600_v2.0.a1 Prupe.2G124800_v2.0.a1 Prupe.2G124900_v2.0.a1 Prupe.2G125100_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125200_v2.0.a1 Prupe.2G125400_v2.0.a1 Prupe.2G125400_v2.0.a1
pyrus_communis	pycom02g17910 pycom02g18260 pycom02g18340
rosa_chinensis	RchiOBHm_Chr1g0346611 RchiOBHm_Chr1g0346641 RchiOBHm_Chr1g0346651 RchiOBHm_Chr1g0346791 RchiOBHm_Chr4g0388531
rosa_laevigata	RLG00000010045 RLG00000010060 RLG00000028784 RLG00000028788 RLG00000028789
rosa_multiflora	Rmu_sc0001241.1_g000008 Rmu_sc0001241.1_g000009 Rmu_sc0002357.1_g000013 Rmu_sc0002640.1_g000020 Rmu_sc0005167.1_g000027 Rmu_sc0006463.1_g000009 Rmu_sc0006463.1_g000017
rosa_roxburghii	Rroxscaffold_4G00308200 Rroxscaffold_4G00308310 Rroxscaffold_4G00308390 Rroxscaffold_5G00334860 Rroxscaffold_5G00334990
rosa_rugosa	Rorug01G0181400 Rorug01G0181700 Rorug01G0182300 Rorug03G0318400
rosa_samantha	Rh1AG200700 Rh1BG166900 Rh1BG167000 Rh1BG167700 Rh1DG197800 Rh1DG198500 Rh4BG016600 Rh4DG017100
rosa_wichuraiana	Rw1G016810 Rw1G016820 Rw4G001580 Rw4G001590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1229, 1575
Acc36I	ACCTGC	1 cut(s)	611
Acc65I	GGTACC	2 cut(s)	623, 1587
AccB1I	GGYRCC	2 cut(s)	623, 1587
AccB7I	CCANNNNNTGG	2 cut(s)	1486, 1597
AciI	CCGC	2 cut(s)	23, 424
AclWI	GGATC	3 cut(s)	597, 1536, 1635
AcoI	YGGCCR	1 cut(s)	856
AcsI	RAATTY	1 cut(s)	227
AcuI	CTGAAG	2 cut(s)	1202, 1679
AcyI	GRCGYC	1 cut(s)	669
AfaI	GTAC	4 cut(s)	199, 625, 1589, 1645
AfiI	CCNNNNNNNGG	4 cut(s)	71, 239, 1486, 1597
AflIII	ACRYGT	1 cut(s)	545
AjnI	CCWGG	3 cut(s)	163, 314, 1479
AloI	GAACNNNNNNTCC	1 cut(s)	36
AluBI	AGCT	7 cut(s)	421, 579, 799, 823, 1180, 1288, 1649
AluI	AGCT	7 cut(s)	421, 579, 799, 823, 1180, 1288, 1649
Alw21I	GWGCWC	1 cut(s)	100
Alw26I	GTCTC	3 cut(s)	127, 867, 1603
AlwI	GGATC	3 cut(s)	597, 1536, 1635
Ama87I	CYCGRG	1 cut(s)	99
AoxI	GGCC	5 cut(s)	470, 510, 856, 1148, 1341
ApeKI	GCWGC	2 cut(s)	440, 1473
ApoI	RAATTY	1 cut(s)	227
AseI	ATTAAT	1 cut(s)	1563
Asp700I	GAANNNNTTC	4 cut(s)	16, 603, 987, 1079
Asp718I	GGTACC	2 cut(s)	623, 1587
AspS9I	GGNCC	5 cut(s)	161, 470, 511, 775, 1149
AsuC2I	CCSGG	1 cut(s)	951
AsuHPI	GGTGA	2 cut(s)	738, 965
AsuII	TTCGAA	2 cut(s)	554, 1330
AvaI	CYCGRG	1 cut(s)	99
AvaII	GGWCC	2 cut(s)	161, 775
BaeGI	GKGCMC	1 cut(s)	8
BaeI	ACNNNNGTAYC	2 cut(s)	1343, 1376
BalI	TGGCCA	1 cut(s)	858
BanI	GGYRCC	2 cut(s)	623, 1587
BauI	CACGAG	1 cut(s)	7
BbsI	GAAGAC	1 cut(s)	1242
Bbv12I	GWGCWC	1 cut(s)	100
BbvCI	CCTCAGC	1 cut(s)	755
BbvI	GCAGC	2 cut(s)	452, 1485
BccI	CCATC	5 cut(s)	76, 580, 867, 980, 1442
BciT130I	CCWGG	3 cut(s)	165, 316, 1481
BciVI	GTATCC	1 cut(s)	1371
BcnI	CCSGG	1 cut(s)	951
BcoDI	GTCTC	3 cut(s)	127, 867, 1603
BfaI	CTAG	6 cut(s)	224, 261, 662, 1469, 1655, 1670
BfmI	CTRYAG	2 cut(s)	403, 1540
BfuAI	ACCTGC	1 cut(s)	611
BfuI	GTATCC	1 cut(s)	1371
BglI	GCCNNNNNGGC	1 cut(s)	864
BglII	AGATCT	1 cut(s)	1548
BisI	GCNGC	2 cut(s)	441, 1474
BlsI	GCNGC	2 cut(s)	442, 1475
Bme1390I	CCNGG	4 cut(s)	165, 316, 951, 1481
Bme18I	GGWCC	2 cut(s)	161, 775
BmeT110I	CYCGRG	1 cut(s)	99
BmgT120I	GGNCC	5 cut(s)	161, 470, 511, 775, 1149
BmiI	GGNNCC	4 cut(s)	411, 625, 776, 1589
BmrFI	CCNGG	4 cut(s)	165, 316, 951, 1481
BmsI	GCATC	1 cut(s)	1310
BpiI	GAAGAC	1 cut(s)	1242
BplI	GAGNNNNNCTC	2 cut(s)	1517, 1549
BpmI	CTGGAG	1 cut(s)	298
Bpu10I	CCTNAGC	1 cut(s)	755
Bpu14I	TTCGAA	2 cut(s)	554, 1330
BpuMI	CCSGG	1 cut(s)	951
BsaHI	GRCGYC	1 cut(s)	669
BsaI	GGTCTC	1 cut(s)	867
BsaJI	CCNNGG	5 cut(s)	315, 481, 749, 1344, 1596
BsaXI	ACNNNNNCTCC	5 cut(s)	34, 105, 135, 1627, 1657
Bsc4I	CCNNNNNNNGG	4 cut(s)	71, 239, 1486, 1597
Bse118I	RCCGGY	1 cut(s)	128
Bse3DI	GCAATG	2 cut(s)	433, 874
BseBI	CCWGG	3 cut(s)	165, 316, 1481
BseDI	CCNNGG	5 cut(s)	315, 481, 749, 1344, 1596
BseGI	GGATG	5 cut(s)	657, 972, 1325, 1438, 1453
BseLI	CCNNNNNNNGG	4 cut(s)	71, 239, 1486, 1597
BseMI	GCAATG	2 cut(s)	433, 874
BseMII	CTCAG	5 cut(s)	362, 488, 731, 746, 1410
BseRI	GAGGAG	1 cut(s)	441
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	2 cut(s)	452, 1485
BseYI	CCCAGC	1 cut(s)	413
BshFI	GGCC	5 cut(s)	472, 512, 858, 1150, 1343
BshNI	GGYRCC	2 cut(s)	623, 1587
BsiHKAI	GWGCWC	1 cut(s)	100
BsiHKCI	CYCGRG	1 cut(s)	99
BsiSI	CCGG	2 cut(s)	129, 951
BslFI	GGGAC	3 cut(s)	515, 788, 906
BslI	CCNNNNNNNGG	4 cut(s)	71, 239, 1486, 1597
BsmAI	GTCTC	3 cut(s)	127, 867, 1603
BsmFI	GGGAC	3 cut(s)	515, 788, 906
BsmI	GAATGC	1 cut(s)	373
BsnI	GGCC	5 cut(s)	472, 512, 858, 1150, 1343
Bso31I	GGTCTC	1 cut(s)	867
BsoBI	CYCGRG	1 cut(s)	99
Bsp119I	TTCGAA	2 cut(s)	554, 1330
Bsp1286I	GDGCHC	2 cut(s)	8, 100
Bsp143I	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
Bsp19I	CCATGG	1 cut(s)	481
BspACI	CCGC	2 cut(s)	23, 424
BspANI	GGCC	5 cut(s)	472, 512, 858, 1150, 1343
BspCNI	CTCAG	5 cut(s)	361, 489, 732, 747, 1411
BspHI	TCATGA	1 cut(s)	582
BspLI	GGNNCC	4 cut(s)	411, 625, 776, 1589
BspMI	ACCTGC	1 cut(s)	611
BspPI	GGATC	3 cut(s)	597, 1536, 1635
BspT104I	TTCGAA	2 cut(s)	554, 1330
BspT107I	GGYRCC	2 cut(s)	623, 1587
BspTNI	GGTCTC	1 cut(s)	867
BsrDI	GCAATG	2 cut(s)	433, 874
BsrFI	RCCGGY	1 cut(s)	128
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	5 cut(s)	315, 481, 749, 1344, 1596
BssMI	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
BssNI	GRCGYC	1 cut(s)	669
BssSI	CACGAG	1 cut(s)	7
BssT1I	CCWWGG	3 cut(s)	481, 1344, 1596
Bst2BI	CACGAG	1 cut(s)	7
Bst2UI	CCWGG	3 cut(s)	165, 316, 1481
Bst4CI	ACNGT	8 cut(s)	202, 277, 750, 766, 786, 920, 1125, 1582
BstACI	GRCGYC	1 cut(s)	669
BstBI	TTCGAA	2 cut(s)	554, 1330
BstC8I	GCNNGC	3 cut(s)	27, 419, 673
BstDEI	CTNAG	8 cut(s)	348, 497, 572, 740, 755, 1041, 1211, 1419
BstDSI	CCRYGG	2 cut(s)	481, 749
BstF5I	GGATG	5 cut(s)	657, 972, 1325, 1438, 1453
BstKTI	GATC	7 cut(s)	592, 642, 746, 1147, 1531, 1551, 1630
BstMAI	GTCTC	3 cut(s)	127, 867, 1603
BstMBI	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
BstMWI	GCNNNNNNNGC	4 cut(s)	423, 864, 939, 1268
BstNI	CCWGG	3 cut(s)	165, 316, 1481
BstNSI	RCATGY	2 cut(s)	899, 1266
BstSCI	CCNGG	4 cut(s)	163, 314, 949, 1479
BstSFI	CTRYAG	2 cut(s)	403, 1540
BstSLI	GKGCMC	1 cut(s)	8
BstV1I	GCAGC	2 cut(s)	452, 1485
BstV2I	GAAGAC	1 cut(s)	1242
BstX2I	RGATCY	2 cut(s)	1548, 1627
BstYI	RGATCY	2 cut(s)	1548, 1627
BsuI	GTATCC	1 cut(s)	1371
BsuRI	GGCC	5 cut(s)	472, 512, 858, 1150, 1343
BtgI	CCRYGG	2 cut(s)	481, 749
BtsCI	GGATG	5 cut(s)	657, 972, 1325, 1438, 1453
BtsI	GCAGTG	2 cut(s)	100, 1491
BtsIMutI	CAGTG	5 cut(s)	100, 291, 1083, 1416, 1491
BveI	ACCTGC	1 cut(s)	611
Cac8I	GCNNGC	3 cut(s)	27, 419, 673
CciI	TCATGA	1 cut(s)	582
Cfr10I	RCCGGY	1 cut(s)	128
Cfr13I	GGNCC	5 cut(s)	161, 470, 511, 775, 1149
CseI	GACGC	1 cut(s)	677
Csp6I	GTAC	4 cut(s)	198, 624, 1588, 1644
CviAII	CATG	9 cut(s)	154, 482, 505, 583, 896, 1169, 1263, 1339, 1495
CviQI	GTAC	4 cut(s)	198, 624, 1588, 1644
DdeI	CTNAG	8 cut(s)	348, 497, 572, 740, 755, 1041, 1211, 1419
DpnI	GATC	7 cut(s)	591, 641, 745, 1146, 1530, 1550, 1629
DpnII	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
DraI	TTTAAA	1 cut(s)	631
EaeI	YGGCCR	1 cut(s)	856
EciI	GGCGGA	1 cut(s)	12
Eco130I	CCWWGG	3 cut(s)	481, 1344, 1596
Eco31I	GGTCTC	1 cut(s)	867
Eco47I	GGWCC	2 cut(s)	161, 775
Eco57I	CTGAAG	2 cut(s)	1202, 1679
Eco88I	CYCGRG	1 cut(s)	99
EcoO109I	RGGNCCY	2 cut(s)	470, 775
EcoRII	CCWGG	3 cut(s)	163, 314, 1479
EcoT14I	CCWWGG	3 cut(s)	481, 1344, 1596
EcoT22I	ATGCAT	1 cut(s)	1325
ErhI	CCWWGG	3 cut(s)	481, 1344, 1596
FaeI	CATG	9 cut(s)	157, 485, 508, 586, 899, 1172, 1266, 1342, 1498
FaqI	GGGAC	3 cut(s)	515, 788, 906
FatI	CATG	9 cut(s)	153, 481, 504, 582, 895, 1168, 1262, 1338, 1494
Fnu4HI	GCNGC	2 cut(s)	441, 1474
FokI	GGATG	5 cut(s)	644, 959, 1332, 1445, 1460
Fsp4HI	GCNGC	2 cut(s)	441, 1474
FspBI	CTAG	6 cut(s)	224, 261, 662, 1469, 1655, 1670
GluI	GCNGC	2 cut(s)	441, 1474
GsaI	CCCAGC	1 cut(s)	417
GsuI	CTGGAG	1 cut(s)	298
HaeIII	GGCC	5 cut(s)	472, 512, 858, 1150, 1343
HapII	CCGG	2 cut(s)	129, 951
HgaI	GACGC	1 cut(s)	677
Hin1I	GRCGYC	1 cut(s)	669
Hin1II	CATG	9 cut(s)	157, 485, 508, 586, 899, 1172, 1266, 1342, 1498
HincII	GTYRAC	3 cut(s)	106, 667, 1248
HindII	GTYRAC	3 cut(s)	106, 667, 1248
HindIII	AAGCTT	1 cut(s)	1286
HinfI	GANTC	1 cut(s)	1659
HpaII	CCGG	2 cut(s)	129, 951
HphI	GGTGA	2 cut(s)	738, 965
Hpy166II	GTNNAC	6 cut(s)	106, 356, 667, 1248, 1492, 1618
Hpy188I	TCNGA	7 cut(s)	47, 81, 334, 351, 706, 982, 1440
Hpy188III	TCNNGA	6 cut(s)	325, 583, 596, 962, 1057, 1556
Hpy8I	GTNNAC	6 cut(s)	106, 356, 667, 1248, 1492, 1618
HpyAV	CCTTC	4 cut(s)	64, 237, 1177, 1703
HpyCH4III	ACNGT	8 cut(s)	202, 277, 750, 766, 786, 920, 1125, 1582
HpyCH4IV	ACGT	3 cut(s)	547, 994, 1250
HpyF10VI	GCNNNNNNNGC	4 cut(s)	423, 864, 939, 1268
HpyF3I	CTNAG	8 cut(s)	348, 497, 572, 740, 755, 1041, 1211, 1419
HpySE526I	ACGT	3 cut(s)	547, 994, 1250
Hsp92I	GRCGYC	1 cut(s)	669
Hsp92II	CATG	9 cut(s)	157, 485, 508, 586, 899, 1172, 1266, 1342, 1498
KpnI	GGTACC	2 cut(s)	627, 1591
Kzo9I	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
LmnI	GCTCC	2 cut(s)	426, 576
Lsp1109I	GCAGC	2 cut(s)	452, 1485
LweI	GCATC	1 cut(s)	1310
MaeI	CTAG	6 cut(s)	224, 261, 662, 1469, 1655, 1670
MaeII	ACGT	3 cut(s)	547, 994, 1250
MaeIII	GTNAC	1 cut(s)	277
MalI	GATC	7 cut(s)	591, 641, 745, 1146, 1530, 1550, 1629
MboI	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
MboII	GAAGA	8 cut(s)	543, 803, 806, 1145, 1247, 1436, 1450, 1676
MflI	RGATCY	2 cut(s)	1548, 1627
MhlI	GDGCHC	2 cut(s)	8, 100
MlsI	TGGCCA	1 cut(s)	858
MluNI	TGGCCA	1 cut(s)	858
MmeI	TCCRAC	1 cut(s)	768
Mox20I	TGGCCA	1 cut(s)	858
Mph1103I	ATGCAT	1 cut(s)	1325
MroXI	GAANNNNTTC	4 cut(s)	16, 603, 987, 1079
MscI	TGGCCA	1 cut(s)	858
MseI	TTAA	9 cut(s)	135, 630, 1029, 1161, 1254, 1413, 1521, 1563, 1714
Msp20I	TGGCCA	1 cut(s)	858
MspI	CCGG	2 cut(s)	129, 951
MspR9I	CCNGG	4 cut(s)	165, 316, 951, 1481
Mva1269I	GAATGC	1 cut(s)	373
MvaI	CCWGG	3 cut(s)	165, 316, 1481
MwoI	GCNNNNNNNGC	4 cut(s)	423, 864, 939, 1268
NciI	CCSGG	1 cut(s)	951
NcoI	CCATGG	1 cut(s)	481
NdeII	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
NlaIII	CATG	9 cut(s)	157, 485, 508, 586, 899, 1172, 1266, 1342, 1498
NlaIV	GGNNCC	4 cut(s)	411, 625, 776, 1589
NmeAIII	GCCGAG	1 cut(s)	1238
NmuCI	GTSAC	1 cut(s)	277
NsiI	ATGCAT	1 cut(s)	1325
NspI	RCATGY	2 cut(s)	899, 1266
NspV	TTCGAA	2 cut(s)	554, 1330
PagI	TCATGA	1 cut(s)	582
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	1 cut(s)	373
PdmI	GAANNNNTTC	4 cut(s)	16, 603, 987, 1079
PfeI	GAWTC	1 cut(s)	1659
PflMI	CCANNNNNTGG	2 cut(s)	1486, 1597
PkrI	GCNGC	2 cut(s)	442, 1475
PpuMI	RGGWCCY	1 cut(s)	775
PshBI	ATTAAT	1 cut(s)	1563
PsiI	TTATAA	2 cut(s)	1229, 1575
Psp5II	RGGWCCY	1 cut(s)	775
Psp6I	CCWGG	3 cut(s)	163, 314, 1479
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	3 cut(s)	163, 314, 1479
PspN4I	GGNNCC	4 cut(s)	411, 625, 776, 1589
PspPI	GGNCC	5 cut(s)	161, 470, 511, 775, 1149
PspPPI	RGGWCCY	1 cut(s)	775
PsuI	RGATCY	2 cut(s)	1548, 1627
RsaI	GTAC	4 cut(s)	199, 625, 1589, 1645
RsaNI	GTAC	4 cut(s)	198, 624, 1588, 1644
SaqAI	TTAA	9 cut(s)	135, 630, 1029, 1161, 1254, 1413, 1521, 1563, 1714
SatI	GCNGC	2 cut(s)	441, 1474
Sau3AI	GATC	7 cut(s)	589, 639, 743, 1144, 1528, 1548, 1627
Sau96I	GGNCC	5 cut(s)	161, 470, 511, 775, 1149
ScrFI	CCNGG	4 cut(s)	165, 316, 951, 1481
SduI	GDGCHC	2 cut(s)	8, 100
SfaNI	GCATC	1 cut(s)	1310
SfcI	CTRYAG	2 cut(s)	403, 1540
SfuI	TTCGAA	2 cut(s)	554, 1330
SinI	GGWCC	2 cut(s)	161, 775
SsiI	CCGC	2 cut(s)	23, 424
SspI	AATATT	2 cut(s)	527, 929
SspMI	CTAG	6 cut(s)	224, 261, 662, 1469, 1655, 1670
StyD4I	CCNGG	4 cut(s)	163, 314, 949, 1479
StyI	CCWWGG	3 cut(s)	481, 1344, 1596
TaaI	ACNGT	8 cut(s)	202, 277, 750, 766, 786, 920, 1125, 1582
TaiI	ACGT	3 cut(s)	550, 997, 1253
TaqI	TCGA	4 cut(s)	554, 595, 642, 1330
TatI	WGTACW	1 cut(s)	1643
TfiI	GAWTC	1 cut(s)	1659
Tru1I	TTAA	9 cut(s)	135, 630, 1029, 1161, 1254, 1413, 1521, 1563, 1714
Tru9I	TTAA	9 cut(s)	135, 630, 1029, 1161, 1254, 1413, 1521, 1563, 1714
TscAI	CASTG	5 cut(s)	100, 298, 1090, 1423, 1491
TseFI	GTSAC	1 cut(s)	277
TseI	GCWGC	2 cut(s)	440, 1473
Tsp45I	GTSAC	1 cut(s)	277
TspDTI	ATGAA	4 cut(s)	450, 571, 667, 1415
TspGWI	ACGGA	1 cut(s)	1077
TspRI	CASTG	5 cut(s)	100, 298, 1090, 1423, 1491
Van91I	CCANNNNNTGG	2 cut(s)	1486, 1597
VpaK11BI	GGWCC	2 cut(s)	161, 775
VspI	ATTAAT	1 cut(s)	1563
XapI	RAATTY	1 cut(s)	227
XceI	RCATGY	2 cut(s)	899, 1266
XcmI	CCANNNNNNNNNTGG	2 cut(s)	866, 884
XmnI	GAANNNNTTC	4 cut(s)	16, 603, 987, 1079
XspI	CTAG	6 cut(s)	224, 261, 662, 1469, 1655, 1670
Zsp2I	ATGCAT	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.