AT4G34050

O-methyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
16310409 .. 16312308
1900 bp
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UTR
Exon/CDS
Intron
AT4G34050.1

Sequence Viewer

Length: 780 bp
ATGGCGACGACAACAACAGAAGCAACGAAGACATCATCGACCAATGGAGAAGATCAGAAGCAGTCTCAGAATCTTCGACATCAAGAAGTTGGTCACAAGAGTCTCTTACAGAGCGATGATCTCTACCAGTATATACTGGAGACAAGTGTGTATCCTAGAGAACCAGAATCAATGAAGGAACTCAGGGAAGTGACAGCAAAACATCCATGGAACATAATGACCACATCAGCTGATGAAGGACAGTTCTTAAACATGCTTATCAAGCTCGTTAACGCCAAGAACACAATGGAGATCGGAGTTTACACTGGCTACTCTCTTCTCGCCACCGCTCTTGCTCTCCCTGAAGACGGCAAAATTCTGGCTATGGATGTCAACAGAGAGAATTACGAATTGGGTTTACCGATCATTGAGAAAGCCGGCGTTGCTCACAAGATCGACTTCAGGGAAGGCCCTGCTCTTCCCGTTCTTGATGAAATCGTTGCTGACGAGAAGAACCATGGAACATATGACTTTATATTCGTTGATGCTGACAAAGACAACTACATCAACTACCACAAGCGTTTGATCGATCTTGTGAAAATTGGAGGAGTGATTGGCTACGACAACACTCTGTGGAATGGTTCTGTCGTGGCTCCTCCTGATGCACCAATGAGGAAGTACGTTCGTTACTACAGAGACTTTGTTCTTGAGCTTAACAAGGCTCTTGCTGCTGACCCTCGGATCGAGATCTGTATGCTCCCTGTTGGTGATGGAATCACTATCTGCCGTCGGATCAGTTGA

Protein Analysis

259

Amino Acids

29.15

Weight (kDa)

5.13

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_3 PF01596 47 - 258 5.6e-97 O-methyltransferase
Methyltransf_24 PF13578 96 - 202 5.2e-08 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000432)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34050 AT4G34050 AT4G34050
fragaria_vesca FvH4_1g06851 FvH4_1g06860 FvH4_1g06860 FvH4_1g06890 FvH4_1g06890 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_2g05780 FvH4_2g05780
malus_domestica MD00G1088100.v1.1 MD02G1073300.v1.1 MD05G1083900.v1.1
prunus_persica Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1
pyrus_communis pycom02g05780 pycom05g08090 pycom10g08030
rosa_chinensis RchiOBHm_Chr2g0092641 RchiOBHm_Chr2g0092651 RchiOBHm_Chr2g0092661 RchiOBHm_Chr2g0092671 RchiOBHm_Chr2g0092711 RchiOBHm_Chr2g0092721 RchiOBHm_Chr2g0102321 RchiOBHm_Chr3g0467881 RchiOBHm_Chr6g0256691
rosa_laevigata RLG00000014741 RLG00000016330 RLG00000016331 RLG00000016332 RLG00000016334 RLG00000016335 RLG00000029637
rosa_multiflora Rmu_sc0001132.1_g000016 Rmu_sc0001132.1_g000022 Rmu_sc0001793.1_g000037 Rmu_sc0005055.1_g000009 Rmu_sc0010161.1_g000022 Rmu_sc0017518.1_g000002 Rmu_sc0017518.1_g000003 Rmu_sc0032103.1_g000001
rosa_roxburghii Rroxscaffold_2G00140570 Rroxscaffold_5G00382650 Rroxscaffold_6G00413380 Rroxscaffold_7G00209130
rosa_rugosa Rorug02G0028400 Rorug02G0028900 Rorug02G0029000 Rorug02G0029100 Rorug02G0106500 Rorug05G0266900 Rorug05G0565700
rosa_samantha Rh1BG085800 Rh2AG074200 Rh2AG074300 Rh2AG074400 Rh2AG074600 Rh2AG154600 Rh2BG160700 Rh2CG076900 Rh2CG077000 Rh2CG077100 Rh2CG077300 Rh2CG077400 Rh2CG077500 Rh2CG160400 Rh3BG159900 Rh3CG160000 Rh3DG160600 Rh5CG376400 Rh6AG083700 Rh6BG078200 Rh6CG072800 Rh6DG070000
rosa_wichuraiana Rw2G005850 Rw2G005870 Rw2G005880 Rw2G012080 Rw3G013130 Rw6G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 329
AciI CCGC 1 cut(s) 327
AclWI GGATC 2 cut(s) 728, 779
AcsI RAATTY 1 cut(s) 354
AcuI CTGAAG 2 cut(s) 363, 424
AdeI CACNNNGTG 1 cut(s) 612
AfaI GTAC 1 cut(s) 659
AfiI CCNNNNNNNGG 1 cut(s) 347
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AluBI AGCT 3 cut(s) 230, 265, 691
AluI AGCT 3 cut(s) 230, 265, 691
Alw26I GTCTC 4 cut(s) 69, 107, 134, 669
AlwI GGATC 2 cut(s) 728, 779
AoxI GGCC 1 cut(s) 448
ApeKI GCWGC 1 cut(s) 707
ApoI RAATTY 1 cut(s) 354
ArsI GACNNNNNNTTYG 2 cut(s) 500, 532
AspS9I GGNCC 1 cut(s) 449
AsuHPI GGTGA 1 cut(s) 758
BbsI GAAGAC 2 cut(s) 35, 351
BbvI GCAGC 1 cut(s) 694
BccI CCATC 1 cut(s) 743
BceAI ACGGC 2 cut(s) 364, 750
BciVI GTATCC 1 cut(s) 162
BcoDI GTCTC 4 cut(s) 69, 107, 134, 669
BfaI CTAG 1 cut(s) 156
BfmI CTRYAG 1 cut(s) 670
BfuI GTATCC 1 cut(s) 162
BglII AGATCT 1 cut(s) 726
BisI GCNGC 1 cut(s) 708
BlsI GCNGC 1 cut(s) 709
BmgT120I GGNCC 1 cut(s) 449
BmiI GGNNCC 1 cut(s) 633
BmsI GCATC 2 cut(s) 514, 631
BpiI GAAGAC 2 cut(s) 35, 351
BpmI CTGGAG 1 cut(s) 158
BpuEI CTTGAG 1 cut(s) 707
Bsa29I ATCGAT 1 cut(s) 567
BsaBI GATNNNNATC 1 cut(s) 725
BsaJI CCNNGG 3 cut(s) 206, 496, 716
Bsc4I CCNNNNNNNGG 1 cut(s) 347
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 3 cut(s) 127, 141, 310
Bse8I GATNNNNATC 1 cut(s) 725
BseCI ATCGAT 1 cut(s) 567
BseDI CCNNGG 3 cut(s) 206, 496, 716
BseGI GGATG 2 cut(s) 202, 373
BseJI GATNNNNATC 1 cut(s) 725
BseLI CCNNNNNNNGG 1 cut(s) 347
BseMII CTCAG 2 cut(s) 80, 196
BseNI ACTGG 3 cut(s) 127, 141, 310
BseRI GAGGAG 2 cut(s) 600, 624
BseXI GCAGC 1 cut(s) 694
BshFI GGCC 1 cut(s) 450
BshVI ATCGAT 1 cut(s) 567
BsiSI CCGG 1 cut(s) 417
BslI CCNNNNNNNGG 1 cut(s) 347
BsmAI GTCTC 4 cut(s) 69, 107, 134, 669
BsnI GGCC 1 cut(s) 450
Bsp19I CCATGG 2 cut(s) 206, 496
BspACI CCGC 1 cut(s) 327
BspANI GGCC 1 cut(s) 450
BspCNI CTCAG 2 cut(s) 79, 195
BspDI ATCGAT 1 cut(s) 567
BspLI GGNNCC 1 cut(s) 633
BspPI GGATC 2 cut(s) 728, 779
BspQI GCTCTTC 1 cut(s) 462
BsrBI CCGCTC 1 cut(s) 329
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 3 cut(s) 127, 141, 310
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 3 cut(s) 206, 496, 716
BssT1I CCWWGG 2 cut(s) 206, 496
Bst4CI ACNGT 1 cut(s) 243
Bst6I CTCTTC 2 cut(s) 321, 462
BstC8I GCNNGC 1 cut(s) 418
BstDEI CTNAG 2 cut(s) 66, 182
BstDSI CCRYGG 2 cut(s) 206, 496
BstF5I GGATG 2 cut(s) 202, 373
BstMAI GTCTC 4 cut(s) 69, 107, 134, 669
BstMWI GCNNNNNNNGC 3 cut(s) 262, 422, 707
BstNSI RCATGY 1 cut(s) 256
BstSFI CTRYAG 1 cut(s) 670
BstV1I GCAGC 1 cut(s) 694
BstV2I GAAGAC 2 cut(s) 35, 351
BstX2I RGATCY 1 cut(s) 726
BstYI RGATCY 1 cut(s) 726
Bsu15I ATCGAT 1 cut(s) 567
BsuI GTATCC 1 cut(s) 162
BsuRI GGCC 1 cut(s) 450
BsuTUI ATCGAT 1 cut(s) 567
BtgI CCRYGG 2 cut(s) 206, 496
BtgZI GCGATG 1 cut(s) 129
BtsCI GGATG 2 cut(s) 202, 373
BtsIMutI CAGTG 1 cut(s) 303
Cac8I GCNNGC 1 cut(s) 418
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 1 cut(s) 449
ClaI ATCGAT 1 cut(s) 567
Csp6I GTAC 1 cut(s) 658
CspCI CAANNNNNGTGG 2 cut(s) 313, 348
CviAII CATG 3 cut(s) 207, 253, 497
CviQI GTAC 1 cut(s) 658
DdeI CTNAG 2 cut(s) 66, 182
DraIII CACNNNGTG 1 cut(s) 612
Eam1104I CTCTTC 2 cut(s) 321, 462
EarI CTCTTC 2 cut(s) 321, 462
Eco130I CCWWGG 2 cut(s) 206, 496
Eco57I CTGAAG 2 cut(s) 363, 424
EcoO109I RGGNCCY 1 cut(s) 449
EcoT14I CCWWGG 2 cut(s) 206, 496
ErhI CCWWGG 2 cut(s) 206, 496
FaeI CATG 3 cut(s) 210, 256, 500
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 422, 454
FatI CATG 3 cut(s) 206, 252, 496
FauNDI CATATG 1 cut(s) 505
Fnu4HI GCNGC 1 cut(s) 708
FokI GGATG 2 cut(s) 189, 380
Fsp4HI GCNGC 1 cut(s) 708
FspBI CTAG 1 cut(s) 156
GluI GCNGC 1 cut(s) 708
GsuI CTGGAG 1 cut(s) 158
HaeIII GGCC 1 cut(s) 450
HapII CCGG 1 cut(s) 417
Hin1II CATG 3 cut(s) 210, 256, 500
HincII GTYRAC 2 cut(s) 271, 373
HindII GTYRAC 2 cut(s) 271, 373
HinfI GANTC 4 cut(s) 70, 100, 167, 753
HpaI GTTAAC 1 cut(s) 271
HpaII CCGG 1 cut(s) 417
HphI GGTGA 1 cut(s) 758
Hpy166II GTNNAC 4 cut(s) 271, 301, 373, 398
Hpy188I TCNGA 5 cut(s) 57, 69, 296, 720, 771
Hpy188III TCNNGA 5 cut(s) 83, 467, 638, 686, 724
Hpy8I GTNNAC 4 cut(s) 271, 301, 373, 398
Hpy99I CGWCG 2 cut(s) 10, 771
HpyAV CCTTC 3 cut(s) 169, 230, 440
HpyCH4III ACNGT 1 cut(s) 243
HpyCH4IV ACGT 1 cut(s) 660
HpyCH4V TGCA 1 cut(s) 644
HpyF10VI GCNNNNNNNGC 3 cut(s) 262, 422, 707
HpyF3I CTNAG 2 cut(s) 66, 182
HpySE526I ACGT 1 cut(s) 660
Hsp92II CATG 3 cut(s) 210, 256, 500
KroI GCCGGC 1 cut(s) 416
KroNI GCCGGC 1 cut(s) 418
KspAI GTTAAC 1 cut(s) 271
LguI GCTCTTC 1 cut(s) 462
LmnI GCTCC 2 cut(s) 637, 741
Lsp1109I GCAGC 1 cut(s) 694
LweI GCATC 2 cut(s) 514, 631
MaeI CTAG 1 cut(s) 156
MaeII ACGT 1 cut(s) 660
MaeIII GTNAC 3 cut(s) 92, 190, 665
MbiI CCGCTC 1 cut(s) 329
MboII GAAGA 7 cut(s) 40, 62, 65, 308, 356, 449, 502
MflI RGATCY 1 cut(s) 726
MluCI AATT 4 cut(s) 354, 382, 389, 579
MlyI GAGTC 1 cut(s) 109
MmeI TCCRAC 1 cut(s) 749
MnlI CCTC 4 cut(s) 578, 645, 645, 726
MroNI GCCGGC 1 cut(s) 416
MseI TTAA 3 cut(s) 248, 270, 693
MspA1I CMGCKG 1 cut(s) 230
MspI CCGG 1 cut(s) 417
MwoI GCNNNNNNNGC 3 cut(s) 262, 422, 707
NaeI GCCGGC 1 cut(s) 418
NcoI CCATGG 2 cut(s) 206, 496
NdeI CATATG 1 cut(s) 505
NgoMIV GCCGGC 1 cut(s) 416
NlaIII CATG 3 cut(s) 210, 256, 500
NlaIV GGNNCC 1 cut(s) 633
NmuCI GTSAC 2 cut(s) 92, 190
NspI RCATGY 1 cut(s) 256
PciSI GCTCTTC 1 cut(s) 462
PcsI WCGNNNNNNNCGW 1 cut(s) 483
PdiI GCCGGC 1 cut(s) 418
PfeI GAWTC 3 cut(s) 70, 167, 753
PkrI GCNGC 1 cut(s) 709
PleI GAGTC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 108
PspN4I GGNNCC 1 cut(s) 633
PspPI GGNCC 1 cut(s) 449
PsuI RGATCY 1 cut(s) 726
PvuII CAGCTG 1 cut(s) 230
RsaI GTAC 1 cut(s) 659
RsaNI GTAC 1 cut(s) 658
SapI GCTCTTC 1 cut(s) 462
SaqAI TTAA 3 cut(s) 248, 270, 693
SatI GCNGC 1 cut(s) 708
Sau96I GGNCC 1 cut(s) 449
SchI GAGTC 1 cut(s) 109
SetI ASST 4 cut(s) 232, 267, 663, 693
SfaNI GCATC 2 cut(s) 514, 631
SfcI CTRYAG 1 cut(s) 670
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
Sse9I AATT 4 cut(s) 354, 382, 389, 579
SsiI CCGC 1 cut(s) 327
SspMI CTAG 1 cut(s) 156
StyI CCWWGG 2 cut(s) 206, 496
TaaI ACNGT 1 cut(s) 243
TaiI ACGT 1 cut(s) 663
TaqI TCGA 5 cut(s) 38, 76, 435, 567, 723
TasI AATT 4 cut(s) 354, 382, 389, 579
TfiI GAWTC 3 cut(s) 70, 167, 753
Tru1I TTAA 3 cut(s) 248, 270, 693
Tru9I TTAA 3 cut(s) 248, 270, 693
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 2 cut(s) 92, 190
TseI GCWGC 1 cut(s) 707
Tsp45I GTSAC 2 cut(s) 92, 190
TspDTI ATGAA 3 cut(s) 188, 249, 486
TspRI CASTG 1 cut(s) 310
XapI RAATTY 1 cut(s) 354
XceI RCATGY 1 cut(s) 256
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XspI CTAG 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.