Prupe.7G214300_v2.0.a1

O-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000432
Physical Location & Seq
Forward (+)
19456381 .. 19457966
1586 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G214300.1

Sequence Viewer

Length: 717 bp
ATGGAAAATACAAGAATGCCAGTGAGCACGAAAAACCCAACTGTGTTGCAGAGCCAGGAGTTACATGAGTACATACTGAAGACTAGTGTGTACCCAAGAGAACCAAATGCTCTCAAGGAACTGAGAATTGCTACTGCAAACCACCCAATGGCTTTCATGGGGACTGCACCTGATGCAGGTCAGCTAATGACCTTTCTCTTGAAACTGGTGAACCCAAAAAAAGCAATTGAAATTGGAGTTTTTACTGGCTACTCTCTTCTCCTCACAGCTCTTACAATTCCTGATGATGGCAAGATTACAGCCATAGACATCAACCGAAAAACATACGAAATAGGCTTGCCAGTTATAAAAAAAGCCGGTGTGGAACACAAAATTGACTTCGTTGAGTCCCAAGCTCTGCCTTTTCTCAACAAACTCTTAGAAGATCCAGAGAAGGAAGGCAGTTTCGACTTTGCTTTTGTTGATGCGGACAAGAACAACTATTGGAACTACCATCAAAGGCTAATGAAACTGATCAAGGTTGGTGGGATACTCATGTATGATAACACACTCTGGGGAGGAACAGTTGCTTGGCCTGAAGAGGATGTTCCAGAGGCCAAAAGGAAGTGGAGGCTGTGCGCAATTGAGTTTAACAAATTGGTTTCTGCTGACACAAACGTTGAAATTTCTCAAGTTCCATTGGGTGATGGGATCACAATCTGCAGGCGCATATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00360 ko00940 ko00941 ko00945 ko01100 ko01110 map00360 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Methyltransf_3

Protein Analysis

239

Amino Acids

26.82

Weight (kDa)

6.13

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000432)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34050 AT4G34050 AT4G34050
fragaria_vesca FvH4_1g06851 FvH4_1g06860 FvH4_1g06860 FvH4_1g06890 FvH4_1g06890 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_2g05780 FvH4_2g05780
malus_domestica MD00G1088100.v1.1 MD02G1073300.v1.1 MD05G1083900.v1.1
prunus_persica Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1
pyrus_communis pycom02g05780 pycom05g08090 pycom10g08030
rosa_chinensis RchiOBHm_Chr2g0092641 RchiOBHm_Chr2g0092651 RchiOBHm_Chr2g0092661 RchiOBHm_Chr2g0092671 RchiOBHm_Chr2g0092711 RchiOBHm_Chr2g0092721 RchiOBHm_Chr2g0102321 RchiOBHm_Chr3g0467881 RchiOBHm_Chr6g0256691
rosa_laevigata RLG00000014741 RLG00000016330 RLG00000016331 RLG00000016332 RLG00000016334 RLG00000016335 RLG00000029637
rosa_multiflora Rmu_sc0001132.1_g000016 Rmu_sc0001132.1_g000022 Rmu_sc0001793.1_g000037 Rmu_sc0005055.1_g000009 Rmu_sc0010161.1_g000022 Rmu_sc0017518.1_g000002 Rmu_sc0017518.1_g000003 Rmu_sc0032103.1_g000001
rosa_roxburghii Rroxscaffold_2G00140570 Rroxscaffold_5G00382650 Rroxscaffold_6G00413380 Rroxscaffold_7G00209130
rosa_rugosa Rorug02G0028400 Rorug02G0028900 Rorug02G0029000 Rorug02G0029100 Rorug02G0106500 Rorug05G0266900 Rorug05G0565700
rosa_samantha Rh1BG085800 Rh2AG074200 Rh2AG074300 Rh2AG074400 Rh2AG074600 Rh2AG154600 Rh2BG160700 Rh2CG076900 Rh2CG077000 Rh2CG077100 Rh2CG077300 Rh2CG077400 Rh2CG077500 Rh2CG160400 Rh3BG159900 Rh3CG160000 Rh3DG160600 Rh5CG376400 Rh6AG083700 Rh6BG078200 Rh6CG072800 Rh6DG070000
rosa_wichuraiana Rw2G005850 Rw2G005870 Rw2G005880 Rw2G012080 Rw3G013130 Rw6G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 347
Acc16I TGCGCA 1 cut(s) 619
Acc36I ACCTGC 1 cut(s) 167
AccB7I CCANNNNNTGG 1 cut(s) 148
AciI CCGC 1 cut(s) 467
AclI AACGTT 1 cut(s) 657
AclWI GGATC 2 cut(s) 419, 698
AcsI RAATTY 1 cut(s) 663
AcuI CTGAAG 2 cut(s) 98, 597
AfaI GTAC 2 cut(s) 71, 92
AfiI CCNNNNNNNGG 3 cut(s) 148, 176, 287
AgsI TTSAA 3 cut(s) 202, 230, 662
AhlI ACTAGT 1 cut(s) 83
AjnI CCWGG 1 cut(s) 54
AjuI GAANNNNNNNTTGG 2 cut(s) 553, 585
AluBI AGCT 3 cut(s) 184, 269, 395
AluI AGCT 3 cut(s) 184, 269, 395
Alw21I GWGCWC 1 cut(s) 29
AlwI GGATC 2 cut(s) 419, 698
AoxI GGCC 2 cut(s) 572, 594
ApoI RAATTY 1 cut(s) 663
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
AspLEI GCGC 2 cut(s) 620, 708
AsuHPI GGTGA 2 cut(s) 220, 695
BaeI ACNNNNGTAYC 2 cut(s) 521, 554
BbsI GAAGAC 1 cut(s) 86
Bbv12I GWGCWC 1 cut(s) 29
BccI CCATC 3 cut(s) 281, 501, 680
BciT130I CCWGG 1 cut(s) 56
BciVI GTATCC 1 cut(s) 522
BclI TGATCA 1 cut(s) 513
BcuI ACTAGT 1 cut(s) 83
BfaI CTAG 1 cut(s) 84
BfmI CTRYAG 1 cut(s) 700
BfuAI ACCTGC 1 cut(s) 167
BfuI GTATCC 1 cut(s) 522
Bme1390I CCNGG 1 cut(s) 56
BmrFI CCNGG 1 cut(s) 56
BmsI GCATC 2 cut(s) 163, 454
BpiI GAAGAC 1 cut(s) 86
BpuEI CTTGAG 2 cut(s) 98, 654
BsaBI GATNNNNATC 1 cut(s) 695
BsaXI ACNNNNNCTCC 2 cut(s) 549, 579
Bsc4I CCNNNNNNNGG 3 cut(s) 148, 176, 287
Bse118I RCCGGY 1 cut(s) 356
Bse1I ACTGG 4 cut(s) 20, 210, 250, 341
Bse8I GATNNNNATC 1 cut(s) 695
BseBI CCWGG 1 cut(s) 56
BseGI GGATG 1 cut(s) 589
BseJI GATNNNNATC 1 cut(s) 695
BseLI CCNNNNNNNGG 3 cut(s) 148, 176, 287
BseMII CTCAG 1 cut(s) 113
BseNI ACTGG 4 cut(s) 20, 210, 250, 341
BseRI GAGGAG 1 cut(s) 251
BsgI GTGCAG 1 cut(s) 150
BshFI GGCC 2 cut(s) 574, 596
BsiHKAI GWGCWC 1 cut(s) 29
BsiSI CCGG 1 cut(s) 357
BslFI GGGAC 2 cut(s) 175, 373
BslI CCNNNNNNNGG 3 cut(s) 148, 176, 287
BsmFI GGGAC 2 cut(s) 175, 373
BsmI GAATGC 1 cut(s) 21
BsnI GGCC 2 cut(s) 574, 596
Bsp1286I GDGCHC 1 cut(s) 29
Bsp143I GATC 3 cut(s) 424, 513, 690
BspACI CCGC 1 cut(s) 467
BspANI GGCC 2 cut(s) 574, 596
BspCNI CTCAG 1 cut(s) 114
BspMAI CTGCAG 1 cut(s) 704
BspMI ACCTGC 1 cut(s) 167
BspPI GGATC 2 cut(s) 419, 698
BsrFI RCCGGY 1 cut(s) 356
BsrI ACTGG 4 cut(s) 20, 210, 250, 341
BssAI RCCGGY 1 cut(s) 356
BssMI GATC 3 cut(s) 424, 513, 690
Bst2UI CCWGG 1 cut(s) 56
Bst4CI ACNGT 2 cut(s) 43, 565
Bst6I CTCTTC 2 cut(s) 261, 573
BstAPI GCANNNNNTGC 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 338, 704
BstDEI CTNAG 2 cut(s) 122, 418
BstENI CCTNNNNNAGG 1 cut(s) 174
BstF5I GGATG 1 cut(s) 589
BstHHI GCGC 2 cut(s) 620, 708
BstKTI GATC 3 cut(s) 427, 516, 693
BstMBI GATC 3 cut(s) 424, 513, 690
BstMWI GCNNNNNNNGC 1 cut(s) 173
BstNI CCWGG 1 cut(s) 56
BstSCI CCNGG 1 cut(s) 54
BstSFI CTRYAG 1 cut(s) 700
BstV2I GAAGAC 1 cut(s) 86
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BsuI GTATCC 1 cut(s) 522
BsuRI GGCC 2 cut(s) 574, 596
BtsCI GGATG 1 cut(s) 589
BtsIMutI CAGTG 1 cut(s) 27
BveI ACCTGC 1 cut(s) 167
Cac8I GCNNGC 2 cut(s) 338, 704
CfoI GCGC 2 cut(s) 620, 708
Cfr10I RCCGGY 1 cut(s) 356
Csp6I GTAC 2 cut(s) 70, 91
CspCI CAANNNNNGTGG 2 cut(s) 505, 540
CviAII CATG 3 cut(s) 65, 157, 535
CviQI GTAC 2 cut(s) 70, 91
DdeI CTNAG 2 cut(s) 122, 418
DpnI GATC 3 cut(s) 426, 515, 692
DpnII GATC 3 cut(s) 424, 513, 690
Eam1104I CTCTTC 2 cut(s) 261, 573
EarI CTCTTC 2 cut(s) 261, 573
Eco57I CTGAAG 2 cut(s) 98, 597
EcoNI CCTNNNNNAGG 1 cut(s) 174
EcoRII CCWGG 1 cut(s) 54
FaeI CATG 3 cut(s) 68, 160, 538
FaqI GGGAC 2 cut(s) 175, 373
FatI CATG 3 cut(s) 64, 156, 534
FauNDI CATATG 1 cut(s) 710
FbaI TGATCA 1 cut(s) 513
FokI GGATG 1 cut(s) 596
FspBI CTAG 1 cut(s) 84
FspI TGCGCA 1 cut(s) 619
GlaI GCGC 2 cut(s) 619, 707
HaeIII GGCC 2 cut(s) 574, 596
HapII CCGG 1 cut(s) 357
HhaI GCGC 2 cut(s) 620, 708
Hin1II CATG 3 cut(s) 68, 160, 538
Hin6I GCGC 2 cut(s) 618, 706
HinP1I GCGC 2 cut(s) 618, 706
HinfI GANTC 1 cut(s) 386
HpaII CCGG 1 cut(s) 357
HphI GGTGA 2 cut(s) 220, 695
Hpy166II GTNNAC 2 cut(s) 91, 211
Hpy188III TCNNGA 4 cut(s) 199, 281, 428, 590
Hpy8I GTNNAC 2 cut(s) 91, 211
HpyAV CCTTC 2 cut(s) 427, 431
HpyCH4III ACNGT 2 cut(s) 43, 565
HpyCH4IV ACGT 1 cut(s) 657
HpyCH4V TGCA 5 cut(s) 49, 137, 167, 176, 702
HpyF10VI GCNNNNNNNGC 1 cut(s) 173
HpyF3I CTNAG 2 cut(s) 122, 418
HpySE526I ACGT 1 cut(s) 657
Hsp92II CATG 3 cut(s) 68, 160, 538
HspAI GCGC 2 cut(s) 618, 706
Ksp22I TGATCA 1 cut(s) 513
Kzo9I GATC 3 cut(s) 424, 513, 690
LweI GCATC 2 cut(s) 163, 454
MaeI CTAG 1 cut(s) 84
MaeII ACGT 1 cut(s) 657
MaeIII GTNAC 1 cut(s) 60
MalI GATC 3 cut(s) 426, 515, 692
MboI GATC 3 cut(s) 424, 513, 690
MboII GAAGA 4 cut(s) 91, 248, 434, 590
MfeI CAATTG 2 cut(s) 225, 621
MflI RGATCY 1 cut(s) 424
MhlI GDGCHC 1 cut(s) 29
MluCI AATT 8 cut(s) 126, 225, 231, 276, 372, 621, 635, 663
MlyI GAGTC 1 cut(s) 395
MnlI CCTC 5 cut(s) 272, 551, 574, 586, 603
MseI TTAA 1 cut(s) 630
MspI CCGG 1 cut(s) 357
MspR9I CCNGG 1 cut(s) 56
MunI CAATTG 2 cut(s) 225, 621
Mva1269I GAATGC 1 cut(s) 21
MvaI CCWGG 1 cut(s) 56
MwoI GCNNNNNNNGC 1 cut(s) 173
NdeI CATATG 1 cut(s) 710
NdeII GATC 3 cut(s) 424, 513, 690
NlaIII CATG 3 cut(s) 68, 160, 538
NsbI TGCGCA 1 cut(s) 619
PctI GAATGC 1 cut(s) 21
PflMI CCANNNNNTGG 1 cut(s) 148
PleI GAGTC 1 cut(s) 394
PpsI GAGTC 1 cut(s) 394
PsiI TTATAA 1 cut(s) 347
Psp1406I AACGTT 1 cut(s) 657
Psp6I CCWGG 1 cut(s) 54
PspGI CCWGG 1 cut(s) 54
PstI CTGCAG 1 cut(s) 704
PsuI RGATCY 1 cut(s) 424
RsaI GTAC 2 cut(s) 71, 92
RsaNI GTAC 2 cut(s) 70, 91
SaqAI TTAA 1 cut(s) 630
Sau3AI GATC 3 cut(s) 424, 513, 690
SchI GAGTC 1 cut(s) 395
ScrFI CCNGG 1 cut(s) 56
SduI GDGCHC 1 cut(s) 29
SetI ASST 8 cut(s) 172, 181, 186, 194, 271, 397, 522, 660
SfaNI GCATC 2 cut(s) 163, 454
SfcI CTRYAG 1 cut(s) 700
SmlI CTYRAG 2 cut(s) 113, 669
SmoI CTYRAG 2 cut(s) 113, 669
SpeI ACTAGT 1 cut(s) 83
Sse9I AATT 8 cut(s) 126, 225, 231, 276, 372, 621, 635, 663
SsiI CCGC 1 cut(s) 467
SspMI CTAG 1 cut(s) 84
StyD4I CCNGG 1 cut(s) 54
TaaI ACNGT 2 cut(s) 43, 565
TaiI ACGT 1 cut(s) 660
TaqI TCGA 1 cut(s) 447
TasI AATT 8 cut(s) 126, 225, 231, 276, 372, 621, 635, 663
TatI WGTACW 1 cut(s) 69
Tru1I TTAA 1 cut(s) 630
Tru9I TTAA 1 cut(s) 630
TscAI CASTG 1 cut(s) 27
TspDTI ATGAA 2 cut(s) 145, 521
TspRI CASTG 1 cut(s) 27
Van91I CCANNNNNTGG 1 cut(s) 148
XagI CCTNNNNNAGG 1 cut(s) 174
XapI RAATTY 1 cut(s) 663
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.