Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0000432

Physical Location & Seq

Genomic Coordinates Forward (+)

15185606 .. 15187399

Gene Structure 1794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G128100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGGCAACCAATGGAGCAGACCAGCAAAACCAGGCAGGGAGGCACCAAGAGGTTGGCCACAAGAGCCTCCTTCAAAGTGATGCACTTTACCAGTATATATTGGAGACAAGTGTGTACCCAAGAGAGCCTGAATCCATGAAGGAGCTCAGAGAAGTGACTGCAAAGCACCCATGGAACATCATGACCACATCAGCTGATGAAGGCCAGTTCTTGAACATGCTTCTCAAGCTCATCAATGCCAAGAACACCATGGAGATTGGGGTCTTCACTGGTTACTCCCTCCTTGCCACAGCTCTTGCCATTCCTGATGATGGAAAGATCTTGGCCATGGACATAAATAGGGAAAACTATGACTTGGGTCGTCCAATTATCGAAAAAGCCGGCGTTGCCCACAAGATTGACTTCAGAGAAGGCCCTGCACTCCCAGTTCTCGACCAACTGGTCGAAGATGAGAAGAATCATGGGTCATATGATTTCATCTTCGTGGACGCAGACAAGGACAACTACATCAACTACCACAAGAGGCTAATTGACCTGGTGAAGGTTGGGGGTTTGATCGGCTACGACAACACCCTATGGAATGGCTCCGTGGTCGCGCCCCCTGATGCCCCGCTCCGCAAGTACGTTAGGTACTACAGGGACTTCGTGCTGGAGCTCAACAAGGCTCTAGCAGCTGACCCCAGAATTGAGATCTGTATGCTTCCAGTTGGCGATGGCATCACCCTCTGCCGTCGGATCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0008168 GO:0008171 GO:0008757 GO:0009058 GO:0009698 GO:0009699 GO:0009804 GO:0009805 GO:0009987 GO:0010035 GO:0010038 GO:0016740 GO:0016741 GO:0018130 GO:0019438 GO:0019748 GO:0032259 GO:0042221 GO:0042409 GO:0044237 GO:0044249 GO:0044550 GO:0046483 GO:0046686 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko00941 ko00945 ko01100 ko01110 map00360 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_3

Protein Analysis

248

Amino Acids

27.84

Weight (kDa)

5.41

Isoelectric Point (pI)

35.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34050 AT4G34050 AT4G34050
fragaria_vesca	FvH4_1g06851 FvH4_1g06860 FvH4_1g06860 FvH4_1g06890 FvH4_1g06890 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g13960 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_1g14010 FvH4_2g05780 FvH4_2g05780
malus_domestica	MD00G1088100.v1.1 MD02G1073300.v1.1 MD05G1083900.v1.1
prunus_persica	Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.7G214300_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1 Prupe.8G128100_v2.0.a1
pyrus_communis	pycom02g05780 pycom05g08090 pycom10g08030
rosa_chinensis	RchiOBHm_Chr2g0092641 RchiOBHm_Chr2g0092651 RchiOBHm_Chr2g0092661 RchiOBHm_Chr2g0092671 RchiOBHm_Chr2g0092711 RchiOBHm_Chr2g0092721 RchiOBHm_Chr2g0102321 RchiOBHm_Chr3g0467881 RchiOBHm_Chr6g0256691
rosa_laevigata	RLG00000014741 RLG00000016330 RLG00000016331 RLG00000016332 RLG00000016334 RLG00000016335 RLG00000029637
rosa_multiflora	Rmu_sc0001132.1_g000016 Rmu_sc0001132.1_g000022 Rmu_sc0001793.1_g000037 Rmu_sc0005055.1_g000009 Rmu_sc0010161.1_g000022 Rmu_sc0017518.1_g000002 Rmu_sc0017518.1_g000003 Rmu_sc0032103.1_g000001
rosa_roxburghii	Rroxscaffold_2G00140570 Rroxscaffold_5G00382650 Rroxscaffold_6G00413380 Rroxscaffold_7G00209130
rosa_rugosa	Rorug02G0028400 Rorug02G0028900 Rorug02G0029000 Rorug02G0029100 Rorug02G0106500 Rorug05G0266900 Rorug05G0565700
rosa_samantha	Rh1BG085800 Rh2AG074200 Rh2AG074300 Rh2AG074400 Rh2AG074600 Rh2AG154600 Rh2BG160700 Rh2CG076900 Rh2CG077000 Rh2CG077100 Rh2CG077300 Rh2CG077400 Rh2CG077500 Rh2CG160400 Rh3BG159900 Rh3CG160000 Rh3DG160600 Rh5CG376400 Rh6AG083700 Rh6BG078200 Rh6CG072800 Rh6DG070000
rosa_wichuraiana	Rw2G005850 Rw2G005870 Rw2G005880 Rw2G012080 Rw3G013130 Rw6G007520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	440
AccB1I	GGYRCC	1 cut(s)	42
AccBSI	CCGCTC	1 cut(s)	613
AccII	CGCG	1 cut(s)	596
AciI	CCGC	2 cut(s)	611, 616
AclWI	GGATC	1 cut(s)	743
AcoI	YGGCCR	2 cut(s)	55, 324
AcuI	CTGAAG	1 cut(s)	388
AfaI	GTAC	3 cut(s)	116, 623, 632
AfiI	CCNNNNNNNGG	2 cut(s)	311, 541
AgsI	TTSAA	2 cut(s)	74, 214
AjnI	CCWGG	2 cut(s)	30, 534
AluBI	AGCT	6 cut(s)	145, 194, 229, 293, 655, 674
AluI	AGCT	6 cut(s)	145, 194, 229, 293, 655, 674
Alw21I	GWGCWC	2 cut(s)	147, 657
Alw26I	GTCTC	1 cut(s)	98
AlwI	GGATC	1 cut(s)	743
AoxI	GGCC	4 cut(s)	55, 202, 324, 412
ApeKI	GCWGC	1 cut(s)	671
AspLEI	GCGC	1 cut(s)	598
AspS9I	GGNCC	1 cut(s)	413
AsuHPI	GGTGA	2 cut(s)	550, 712
BalI	TGGCCA	2 cut(s)	57, 326
BanI	GGYRCC	1 cut(s)	42
BanII	GRGCYC	2 cut(s)	147, 657
BbsI	GAAGAC	1 cut(s)	256
Bbv12I	GWGCWC	2 cut(s)	147, 657
BbvI	GCAGC	1 cut(s)	683
BccI	CCATC	2 cut(s)	305, 707
BceAI	ACGGC	1 cut(s)	714
BciT130I	CCWGG	2 cut(s)	32, 536
BcoDI	GTCTC	1 cut(s)	98
BfaI	CTAG	1 cut(s)	668
BfmI	CTRYAG	1 cut(s)	634
BglII	AGATCT	2 cut(s)	318, 690
BisI	GCNGC	1 cut(s)	672
BlsI	GCNGC	1 cut(s)	673
Bme1390I	CCNGG	2 cut(s)	32, 536
BmgT120I	GGNCC	1 cut(s)	413
BmiI	GGNNCC	2 cut(s)	44, 586
BmrFI	CCNGG	2 cut(s)	32, 536
BmrI	ACTGGG	1 cut(s)	419
BmsI	GCATC	3 cut(s)	70, 595, 726
BmuI	ACTGGG	1 cut(s)	419
BoxI	GACNNNNGTC	1 cut(s)	357
BpiI	GAAGAC	1 cut(s)	256
BpmI	CTGGAG	1 cut(s)	671
BpuEI	CTTGAG	1 cut(s)	209
BsaJI	CCNNGG	4 cut(s)	170, 249, 327, 588
Bsc4I	CCNNNNNNNGG	2 cut(s)	311, 541
Bse118I	RCCGGY	1 cut(s)	380
Bse1I	ACTGG	6 cut(s)	91, 205, 274, 425, 444, 704
BseBI	CCWGG	2 cut(s)	32, 536
BseDI	CCNNGG	4 cut(s)	170, 249, 327, 588
BseLI	CCNNNNNNNGG	2 cut(s)	311, 541
BseMII	CTCAG	1 cut(s)	160
BseNI	ACTGG	6 cut(s)	91, 205, 274, 425, 444, 704
BseXI	GCAGC	1 cut(s)	683
BsgI	GTGCAG	1 cut(s)	402
Bsh1236I	CGCG	1 cut(s)	596
BshFI	GGCC	4 cut(s)	57, 204, 326, 414
BshNI	GGYRCC	1 cut(s)	42
BsiHKAI	GWGCWC	2 cut(s)	147, 657
BsiSI	CCGG	1 cut(s)	381
BslFI	GGGAC	1 cut(s)	653
BslI	CCNNNNNNNGG	2 cut(s)	311, 541
BsmAI	GTCTC	1 cut(s)	98
BsmFI	GGGAC	1 cut(s)	653
BsnI	GGCC	4 cut(s)	57, 204, 326, 414
Bsp1286I	GDGCHC	2 cut(s)	147, 657
Bsp143I	GATC	4 cut(s)	318, 555, 690, 735
Bsp19I	CCATGG	3 cut(s)	170, 249, 327
BspACI	CCGC	2 cut(s)	611, 616
BspANI	GGCC	4 cut(s)	57, 204, 326, 414
BspCNI	CTCAG	1 cut(s)	159
BspFNI	CGCG	1 cut(s)	596
BspHI	TCATGA	1 cut(s)	180
BspLI	GGNNCC	2 cut(s)	44, 586
BspPI	GGATC	1 cut(s)	743
BspT107I	GGYRCC	1 cut(s)	42
BsrBI	CCGCTC	1 cut(s)	613
BsrFI	RCCGGY	1 cut(s)	380
BsrI	ACTGG	6 cut(s)	91, 205, 274, 425, 444, 704
BssAI	RCCGGY	1 cut(s)	380
BssECI	CCNNGG	4 cut(s)	170, 249, 327, 588
BssMI	GATC	4 cut(s)	318, 555, 690, 735
BssT1I	CCWWGG	3 cut(s)	170, 249, 327
Bst2UI	CCWGG	2 cut(s)	32, 536
BstC8I	GCNNGC	1 cut(s)	382
BstDEI	CTNAG	1 cut(s)	146
BstDSI	CCRYGG	4 cut(s)	170, 249, 327, 588
BstENI	CCTNNNNNAGG	1 cut(s)	539
BstFNI	CGCG	1 cut(s)	596
BstHHI	GCGC	1 cut(s)	598
BstKTI	GATC	4 cut(s)	321, 558, 693, 738
BstMAI	GTCTC	1 cut(s)	98
BstMBI	GATC	4 cut(s)	318, 555, 690, 735
BstMWI	GCNNNNNNNGC	4 cut(s)	63, 226, 386, 671
BstNI	CCWGG	2 cut(s)	32, 536
BstNSI	RCATGY	1 cut(s)	220
BstPAI	GACNNNNGTC	1 cut(s)	357
BstSCI	CCNGG	2 cut(s)	30, 534
BstSFI	CTRYAG	1 cut(s)	634
BstUI	CGCG	1 cut(s)	596
BstV1I	GCAGC	1 cut(s)	683
BstV2I	GAAGAC	1 cut(s)	256
BstX2I	RGATCY	2 cut(s)	318, 690
BstXI	CCANNNNNNTGG	1 cut(s)	53
BstYI	RGATCY	2 cut(s)	318, 690
BsuRI	GGCC	4 cut(s)	57, 204, 326, 414
BtgI	CCRYGG	4 cut(s)	170, 249, 327, 588
BtgZI	GCGATG	1 cut(s)	726
BtsIMutI	CAGTG	1 cut(s)	267
Cac8I	GCNNGC	1 cut(s)	382
CciI	TCATGA	1 cut(s)	180
CfoI	GCGC	1 cut(s)	598
Cfr10I	RCCGGY	1 cut(s)	380
Cfr13I	GGNCC	1 cut(s)	413
CseI	GACGC	1 cut(s)	497
CsiI	ACCWGGT	1 cut(s)	534
Csp6I	GTAC	3 cut(s)	115, 622, 631
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviAII	CATG	7 cut(s)	136, 171, 181, 217, 250, 328, 461
CviQI	GTAC	3 cut(s)	115, 622, 631
DdeI	CTNAG	1 cut(s)	146
DpnI	GATC	4 cut(s)	320, 557, 692, 737
DpnII	GATC	4 cut(s)	318, 555, 690, 735
DrdI	GACNNNNNNGTC	1 cut(s)	440
DseDI	GACNNNNNNGTC	1 cut(s)	440
EaeI	YGGCCR	2 cut(s)	55, 324
Ecl136II	GAGCTC	2 cut(s)	145, 655
Eco130I	CCWWGG	3 cut(s)	170, 249, 327
Eco24I	GRGCYC	2 cut(s)	147, 657
Eco53kI	GAGCTC	2 cut(s)	145, 655
Eco57I	CTGAAG	1 cut(s)	388
EcoICRI	GAGCTC	2 cut(s)	145, 655
EcoNI	CCTNNNNNAGG	1 cut(s)	539
EcoO109I	RGGNCCY	1 cut(s)	413
EcoRII	CCWGG	2 cut(s)	30, 534
EcoT14I	CCWWGG	3 cut(s)	170, 249, 327
EcoT38I	GRGCYC	2 cut(s)	147, 657
ErhI	CCWWGG	3 cut(s)	170, 249, 327
FaeI	CATG	7 cut(s)	139, 174, 184, 220, 253, 331, 464
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	1 cut(s)	653
FatI	CATG	7 cut(s)	135, 170, 180, 216, 249, 327, 460
FauI	CCCGC	1 cut(s)	618
FauNDI	CATATG	1 cut(s)	469
Fnu4HI	GCNGC	1 cut(s)	672
FriOI	GRGCYC	2 cut(s)	147, 657
Fsp4HI	GCNGC	1 cut(s)	672
FspBI	CTAG	1 cut(s)	668
GlaI	GCGC	1 cut(s)	597
GluI	GCNGC	1 cut(s)	672
GsuI	CTGGAG	1 cut(s)	671
HaeIII	GGCC	4 cut(s)	57, 204, 326, 414
HapII	CCGG	1 cut(s)	381
HgaI	GACGC	1 cut(s)	497
HhaI	GCGC	1 cut(s)	598
Hin1II	CATG	7 cut(s)	139, 174, 184, 220, 253, 331, 464
Hin6I	GCGC	1 cut(s)	596
HinP1I	GCGC	1 cut(s)	596
HinfI	GANTC	2 cut(s)	131, 457
HpaII	CCGG	1 cut(s)	381
HphI	GGTGA	2 cut(s)	550, 712
Hpy166II	GTNNAC	2 cut(s)	115, 487
Hpy188I	TCNGA	3 cut(s)	149, 407, 735
Hpy188III	TCNNGA	4 cut(s)	181, 211, 305, 431
Hpy8I	GTNNAC	2 cut(s)	115, 487
Hpy99I	CGWCG	1 cut(s)	735
HpyAV	CCTTC	5 cut(s)	80, 133, 194, 404, 535
HpyCH4IV	ACGT	1 cut(s)	624
HpyCH4V	TGCA	3 cut(s)	83, 161, 419
HpyF10VI	GCNNNNNNNGC	4 cut(s)	63, 226, 386, 671
HpyF3I	CTNAG	1 cut(s)	146
HpySE526I	ACGT	1 cut(s)	624
Hsp92II	CATG	7 cut(s)	139, 174, 184, 220, 253, 331, 464
HspAI	GCGC	1 cut(s)	596
KroI	GCCGGC	1 cut(s)	380
KroNI	GCCGGC	1 cut(s)	382
Kzo9I	GATC	4 cut(s)	318, 555, 690, 735
LmnI	GCTCC	5 cut(s)	14, 142, 590, 618, 652
Lsp1109I	GCAGC	1 cut(s)	683
LweI	GCATC	3 cut(s)	70, 595, 726
MabI	ACCWGGT	1 cut(s)	534
MaeI	CTAG	1 cut(s)	668
MaeII	ACGT	1 cut(s)	624
MaeIII	GTNAC	2 cut(s)	154, 272
MalI	GATC	4 cut(s)	320, 557, 692, 737
MbiI	CCGCTC	1 cut(s)	613
MboI	GATC	4 cut(s)	318, 555, 690, 735
MboII	GAAGA	4 cut(s)	256, 458, 466, 472
MflI	RGATCY	2 cut(s)	318, 690
MhlI	GDGCHC	2 cut(s)	147, 657
MlsI	TGGCCA	2 cut(s)	57, 326
MluCI	AATT	3 cut(s)	366, 528, 684
MluNI	TGGCCA	2 cut(s)	57, 326
MmeI	TCCRAC	1 cut(s)	713
MnlI	CCTC	6 cut(s)	33, 43, 77, 290, 516, 734
Mox20I	TGGCCA	2 cut(s)	57, 326
MroNI	GCCGGC	1 cut(s)	380
MscI	TGGCCA	2 cut(s)	57, 326
MslI	CAYNNNNRTG	1 cut(s)	482
Msp20I	TGGCCA	2 cut(s)	57, 326
MspA1I	CMGCKG	2 cut(s)	194, 674
MspI	CCGG	1 cut(s)	381
MspR9I	CCNGG	2 cut(s)	32, 536
MvaI	CCWGG	2 cut(s)	32, 536
MvnI	CGCG	1 cut(s)	596
MwoI	GCNNNNNNNGC	4 cut(s)	63, 226, 386, 671
NaeI	GCCGGC	1 cut(s)	382
NcoI	CCATGG	3 cut(s)	170, 249, 327
NdeI	CATATG	1 cut(s)	469
NdeII	GATC	4 cut(s)	318, 555, 690, 735
NgoMIV	GCCGGC	1 cut(s)	380
NlaIII	CATG	7 cut(s)	139, 174, 184, 220, 253, 331, 464
NlaIV	GGNNCC	2 cut(s)	44, 586
NmuCI	GTSAC	1 cut(s)	154
NspI	RCATGY	1 cut(s)	220
PagI	TCATGA	1 cut(s)	180
PdiI	GCCGGC	1 cut(s)	382
PfeI	GAWTC	2 cut(s)	131, 457
PkrI	GCNGC	1 cut(s)	673
PshAI	GACNNNNGTC	1 cut(s)	357
Psp124BI	GAGCTC	2 cut(s)	147, 657
Psp6I	CCWGG	2 cut(s)	30, 534
PspGI	CCWGG	2 cut(s)	30, 534
PspN4I	GGNNCC	2 cut(s)	44, 586
PspPI	GGNCC	1 cut(s)	413
PsuI	RGATCY	2 cut(s)	318, 690
PvuII	CAGCTG	2 cut(s)	194, 674
RsaI	GTAC	3 cut(s)	116, 623, 632
RsaNI	GTAC	3 cut(s)	115, 622, 631
RseI	CAYNNNNRTG	1 cut(s)	482
SacI	GAGCTC	2 cut(s)	147, 657
SatI	GCNGC	1 cut(s)	672
Sau3AI	GATC	4 cut(s)	318, 555, 690, 735
Sau96I	GGNCC	1 cut(s)	413
ScrFI	CCNGG	2 cut(s)	32, 536
SduI	GDGCHC	2 cut(s)	147, 657
SexAI	ACCWGGT	1 cut(s)	534
SfaNI	GCATC	3 cut(s)	70, 595, 726
SfcI	CTRYAG	1 cut(s)	634
SmiMI	CAYNNNNRTG	1 cut(s)	482
SmlI	CTYRAG	1 cut(s)	224
SmoI	CTYRAG	1 cut(s)	224
Sse9I	AATT	3 cut(s)	366, 528, 684
SsiI	CCGC	2 cut(s)	611, 616
SspMI	CTAG	1 cut(s)	668
SstI	GAGCTC	2 cut(s)	147, 657
StyD4I	CCNGG	2 cut(s)	30, 534
StyI	CCWWGG	3 cut(s)	170, 249, 327
TaiI	ACGT	1 cut(s)	627
TaqI	TCGA	3 cut(s)	372, 432, 444
TasI	AATT	3 cut(s)	366, 528, 684
TfiI	GAWTC	2 cut(s)	131, 457
TscAI	CASTG	1 cut(s)	274
TseFI	GTSAC	1 cut(s)	154
TseI	GCWGC	1 cut(s)	671
Tsp45I	GTSAC	1 cut(s)	154
TspDTI	ATGAA	3 cut(s)	152, 213, 466
TspGWI	ACGGA	1 cut(s)	577
TspRI	CASTG	1 cut(s)	274
XagI	CCTNNNNNAGG	1 cut(s)	539
XceI	RCATGY	1 cut(s)	220
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XspI	CTAG	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.