AT5G51740

Peptidase family M48

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
21016841 .. 21019221
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G51740.1

Sequence Viewer

Length: 1329 bp
ATGTCATGGTACAGAAGAACAAAACTCGTATTCGATTCCCTGCGACGCAACATAAACCCGAAGATTCTACCTCGATCTCATGTTACTTCGAGAATCAACAATCCAATTGGGTCTTCTAATCCCTCAGCTAAGTTCTCTTCAATCTCTTCGCGAGAAGTAGGATTAAGATCATGGACATCTCTCGGCCGAAACACGAACAGAATCGCGTATAATCCGTTTCTGAGTCAACCCAAGAGATATTACTACGTTGATCGATACCAAGTTCGTCATTTCAAGCCACGAGGACCAGGACGGTGGTTTCAAAACCCTAGAACTGTGTTTACGGTGGTGCTCGTTGGTTCCGTTGGTCTGATCACTTTGATTGTTGGGAATACAGAAACGATTCCGTACACAAAGAGAACACATTTCATTCTCTTATCGAAACCTATGGAGAAGCTTCTTGGTGAAACTCAATTTGAGCAGATTAAGAAAACTTACCAAGGGAAAATTCTTCCTGCGACTCATCCTGAGAGTATCAGGGTTAGATTGATAGCTAAAGAGGTTATTGATGCGTTACAGAGAGGTTTGAGTAATGAGCGTGTATGGAGTGATTTGGGGTATGCTTCTACTGAGAGTAGTTTGGGAGGTGGTAGTGATAAAGGAGTTAAGGAAATGGAAATGGCTATGAGTGGTGAAGATACTATGACTGATATGAAATGGTCTAAAGAAGATCAGGTTCTTGATGATCAATGGATTCAAAAGAGTAGGAAGAAAGATTCAAAGGCTCATGCAGCGACTAGTCATCTTGAAGGTATTAGTTGGGAGGTTCTTGTGGTTAATGAGCCTATTGTTAACGCGTTTTGTTTGCCTGCTGGGAAGATTGTGGTGTTCACTGGGCTGCTTAATCATTTCAAGTCAGATGCTGAAGTTGCCACTGTGATTGGGCATGAGGTTGGTCATGCGGTGGCCCGACATGTAGCTGAGGGAATAACTAAGAACTTGTGGTTTGCTATCCTTCAACTGGTCCTATATCAGTTTGTCATGCCTGATCTTGTGAACACTATGTCCGCCCTTTTCTTGAGGCTTCCTTTCTCCAGAAAGATGGAGATAGAAGCAGACTACATCGGTTTGCTGTTACTTGCATCTGCGGGCTATGACCCACGAGTAGCTCCCACAGTGTATGAGAAGCTGGGAAAGCTCGGTGGAGACGCACTCGGAGATTATCTATCGACCCATCCGTCGGGAAAAAAGAGATCAAAACTTTTGGCTCAAGCCAATGTGATGGAAGAAGCACTAATGATATATAGAGAAGTCCAAGCAGGTCGTACTGGCGTTGAAGGCTTTCTTTAG

Protein Analysis

442

Amino Acids

49.66

Weight (kDa)

9.63

Isoelectric Point (pI)

35.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M48 PF01435 246 - 415 1.1e-31 Peptidase family M48
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000604)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51740 AT5G51740 AT5G51740
fragaria_vesca FvH4_7g28431 FvH4_7g28432
malus_domestica MD01G1187900.v1.1 MD07G1015000.v1.1 MD07G1260500.v1.1
prunus_persica Prupe.2G284300_v2.0.a1 Prupe.2G284400_v2.0.a1
pyrus_communis pycom01g19990 pycom07g23380 pycom07g23540 pycom07g23740
rosa_chinensis RchiOBHm_Chr1g0342951 RchiOBHm_Chr1g0375391 RchiOBHm_Chr1g0375401 RchiOBHm_Chr1g0375411 RchiOBHm_Chr2g0123811 RchiOBHm_Chr4g0391111 RchiOBHm_Chr4g0406741 RchiOBHm_Chr5g0031101 RchiOBHm_Chr7g0214411
rosa_laevigata RLG00000004191 RLG00000019338 RLG00000026663 RLG00000026664
rosa_multiflora Rmu_sc0000554.1_g000043 Rmu_sc0000554.1_g000047 Rmu_sc0001966.1_g000052 Rmu_sc0002169.1_g000012 Rmu_sc0006244.1_g000048 Rmu_sc0007176.1_g000002 Rmu_sc0014983.1_g000004 Rmu_sc0020175.1_g000003 Rmu_sc0021990.1_g000003 Rmu_ssc0000106.1_g000001
rosa_roxburghii Rroxscaffold_1G00029630 Rroxscaffold_1G00049160 Rroxscaffold_3G00235470 Rroxscaffold_3G00235480 Rroxscaffold_4G00282790 Rroxscaffold_4G00282800 Rroxscaffold_5G00357450 Rroxscaffold_5G00360550
rosa_rugosa Rorug01G0390800 Rorug01G0390800 Rorug06G0413000
rosa_samantha Rh1AG177000 Rh1AG401300 Rh1AG401400 Rh1BG362700 Rh1BG363000 Rh1BG363100 Rh1BG366200 Rh1CG376300 Rh1CG378900 Rh1DG069900 Rh1DG393500 Rh1DG393800 Rh1DG393900 Rh1DG396800 Rh2AG166900 Rh2DG172200 Rh2DG463600 Rh3CG274900 Rh4BG226700 Rh5AG215800 Rh5AG215900 Rh5BG215300 Rh5CG238800 Rh5DG219700 Rh5DG219800 Rh6BG136300 Rh6CG134700 Rh6DG121000 Rh7CG183600 Rh7DG190700
rosa_wichuraiana Rw1G035620 Rw1G035630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1216
Acc36I ACCTGC 1 cut(s) 1289
AccII CGCG 3 cut(s) 151, 206, 836
AciI CCGC 3 cut(s) 941, 1047, 1127
AcoI YGGCCR 1 cut(s) 184
AcsI RAATTY 1 cut(s) 486
AcuI CTGAAG 1 cut(s) 924
AfaI GTAC 3 cut(s) 11, 389, 1306
AfiI CCNNNNNNNGG 2 cut(s) 1000, 1219
AflIII ACRYGT 2 cut(s) 834, 952
AgsI TTSAA 9 cut(s) 141, 274, 302, 737, 759, 788, 892, 998, 1316
AhlI ACTAGT 1 cut(s) 776
AjnI CCWGG 1 cut(s) 286
AjuI GAANNNNNNNTTGG 4 cut(s) 97, 129, 471, 503
AloI GAACNNNNNNTCC 2 cut(s) 1028, 1060
AluBI AGCT 7 cut(s) 128, 436, 533, 959, 1148, 1168, 1177
AluI AGCT 7 cut(s) 128, 436, 533, 959, 1148, 1168, 1177
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 1 cut(s) 1179
AlwNI CAGNNNCTG 1 cut(s) 902
AoxI GGCC 2 cut(s) 184, 945
ApeKI GCWGC 2 cut(s) 770, 877
ApoI RAATTY 1 cut(s) 486
Asp700I GAANNNNTTC 2 cut(s) 381, 1320
AspS9I GGNCC 3 cut(s) 284, 946, 1003
AsuHPI GGTGA 2 cut(s) 455, 683
AvaII GGWCC 2 cut(s) 284, 1003
BauI CACGAG 2 cut(s) 279, 1140
BbsI GAAGAC 1 cut(s) 105
Bbv12I GWGCWC 1 cut(s) 333
BbvCI CCTCAGC 2 cut(s) 124, 960
BbvI GCAGC 2 cut(s) 782, 864
BccI CCATC 3 cut(s) 1075, 1221, 1255
BciT130I CCWGG 1 cut(s) 288
BclI TGATCA 2 cut(s) 351, 724
BcoDI GTCTC 1 cut(s) 1179
BcuI ACTAGT 1 cut(s) 776
BfaI CTAG 2 cut(s) 309, 777
BfuAI ACCTGC 1 cut(s) 1289
BisI GCNGC 2 cut(s) 771, 878
BlsI GCNGC 2 cut(s) 772, 879
Bme1390I CCNGG 1 cut(s) 288
Bme18I GGWCC 2 cut(s) 284, 1003
BmgT120I GGNCC 3 cut(s) 284, 946, 1003
BmiI GGNNCC 1 cut(s) 340
BmrFI CCNGG 1 cut(s) 288
BmrI ACTGGG 1 cut(s) 882
BmsI GCATC 3 cut(s) 538, 889, 1130
BmuI ACTGGG 1 cut(s) 882
BpiI GAAGAC 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 1176, 1208
BpmI CTGGAG 1 cut(s) 1057
Bpu10I CCTNAGC 2 cut(s) 124, 960
BpuEI CTTGAG 2 cut(s) 1078, 1233
Bsa29I ATCGAT 1 cut(s) 253
BsaBI GATNNNNATC 1 cut(s) 166
BsaJI CCNNGG 1 cut(s) 478
Bsc4I CCNNNNNNNGG 2 cut(s) 1000, 1219
Bse1I ACTGG 3 cut(s) 877, 1005, 1312
Bse8I GATNNNNATC 1 cut(s) 166
BseBI CCWGG 1 cut(s) 288
BseCI ATCGAT 1 cut(s) 253
BseDI CCNNGG 1 cut(s) 478
BseGI GGATG 2 cut(s) 502, 1213
BseJI GATNNNNATC 1 cut(s) 166
BseLI CCNNNNNNNGG 2 cut(s) 1000, 1219
BseMII CTCAG 5 cut(s) 138, 212, 498, 600, 951
BseNI ACTGG 3 cut(s) 877, 1005, 1312
BseX3I CGGCCG 1 cut(s) 184
BseXI GCAGC 2 cut(s) 782, 864
BseYI CCCAGC 2 cut(s) 851, 1168
Bsh1236I CGCG 3 cut(s) 151, 206, 836
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 2 cut(s) 186, 947
BshVI ATCGAT 1 cut(s) 253
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 333
BslI CCNNNNNNNGG 2 cut(s) 1000, 1219
BsmAI GTCTC 1 cut(s) 1179
BsmBI CGTCTC 1 cut(s) 1179
BsnI GGCC 2 cut(s) 186, 947
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
Bsp68I TCGCGA 1 cut(s) 151
BspACI CCGC 3 cut(s) 941, 1047, 1127
BspANI GGCC 2 cut(s) 186, 947
BspCNI CTCAG 5 cut(s) 137, 213, 499, 601, 952
BspDI ATCGAT 1 cut(s) 253
BspFNI CGCG 3 cut(s) 151, 206, 836
BspLI GGNNCC 1 cut(s) 340
BspMI ACCTGC 1 cut(s) 1289
BsrI ACTGG 3 cut(s) 877, 1005, 1312
BssECI CCNNGG 1 cut(s) 478
BssMI GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
BssSI CACGAG 2 cut(s) 279, 1140
BssT1I CCWWGG 1 cut(s) 478
Bst2BI CACGAG 2 cut(s) 279, 1140
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 5 cut(s) 294, 316, 325, 916, 1156
Bst6I CTCTTC 2 cut(s) 142, 151
BstC8I GCNNGC 2 cut(s) 849, 1129
BstDEI CTNAG 7 cut(s) 124, 129, 221, 507, 609, 960, 972
BstF5I GGATG 2 cut(s) 502, 1213
BstFNI CGCG 3 cut(s) 151, 206, 836
BstKTI GATC 8 cut(s) 77, 170, 253, 354, 712, 727, 1030, 1235
BstMAI GTCTC 1 cut(s) 1179
BstMBI GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 4 cut(s) 770, 908, 1174, 1317
BstNI CCWGG 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 956
BstSCI CCNGG 1 cut(s) 286
BstUI CGCG 3 cut(s) 151, 206, 836
BstV1I GCAGC 2 cut(s) 782, 864
BstV2I GAAGAC 1 cut(s) 105
BstXI CCANNNNNNTGG 3 cut(s) 294, 1081, 1261
BstZI CGGCCG 1 cut(s) 184
Bsu15I ATCGAT 1 cut(s) 253
BsuRI GGCC 2 cut(s) 186, 947
BsuTUI ATCGAT 1 cut(s) 253
BtsCI GGATG 2 cut(s) 502, 1213
BtsIMutI CAGTG 3 cut(s) 870, 912, 1161
BtuMI TCGCGA 1 cut(s) 151
BveI ACCTGC 1 cut(s) 1289
Cac8I GCNNGC 2 cut(s) 849, 1129
CaiI CAGNNNCTG 1 cut(s) 902
Cfr13I GGNCC 3 cut(s) 284, 946, 1003
ClaI ATCGAT 1 cut(s) 253
CseI GACGC 2 cut(s) 54, 1196
Csp6I GTAC 3 cut(s) 10, 388, 1305
CspCI CAANNNNNGTGG 2 cut(s) 901, 936
CviAII CATG 8 cut(s) 6, 80, 171, 767, 926, 938, 953, 1021
CviQI GTAC 3 cut(s) 10, 388, 1305
DdeI CTNAG 7 cut(s) 124, 129, 221, 507, 609, 960, 972
DpnI GATC 8 cut(s) 76, 169, 252, 353, 711, 726, 1029, 1234
DpnII GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
DrdI GACNNNNNNGTC 1 cut(s) 1216
DseDI GACNNNNNNGTC 1 cut(s) 1216
EaeI YGGCCR 1 cut(s) 184
EagI CGGCCG 1 cut(s) 184
Eam1104I CTCTTC 2 cut(s) 142, 151
EarI CTCTTC 2 cut(s) 142, 151
EciI GGCGGA 1 cut(s) 1036
EclXI CGGCCG 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 478
Eco47I GGWCC 2 cut(s) 284, 1003
Eco52I CGGCCG 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 924
EcoRII CCWGG 1 cut(s) 286
EcoT14I CCWWGG 1 cut(s) 478
ErhI CCWWGG 1 cut(s) 478
Esp3I CGTCTC 1 cut(s) 1179
FaeI CATG 8 cut(s) 9, 83, 174, 770, 929, 941, 956, 1024
FalI AAGNNNNNCTT 1 cut(s) 1308
FatI CATG 8 cut(s) 5, 79, 170, 766, 925, 937, 952, 1020
FauI CCCGC 1 cut(s) 1120
FbaI TGATCA 2 cut(s) 351, 724
Fnu4HI GCNGC 2 cut(s) 771, 878
FokI GGATG 2 cut(s) 489, 1200
Fsp4HI GCNGC 2 cut(s) 771, 878
FspBI CTAG 2 cut(s) 309, 777
GluI GCNGC 2 cut(s) 771, 878
GsaI CCCAGC 2 cut(s) 855, 1172
GsuI CTGGAG 1 cut(s) 1057
HaeIII GGCC 2 cut(s) 186, 947
HgaI GACGC 2 cut(s) 54, 1196
Hin1II CATG 8 cut(s) 9, 83, 174, 770, 929, 941, 956, 1024
HincII GTYRAC 2 cut(s) 227, 832
HindII GTYRAC 2 cut(s) 227, 832
HindIII AAGCTT 1 cut(s) 434
HinfI GANTC 9 cut(s) 35, 64, 93, 201, 223, 382, 499, 733, 755
HpaI GTTAAC 1 cut(s) 832
HphI GGTGA 2 cut(s) 455, 683
Hpy166II GTNNAC 6 cut(s) 227, 321, 390, 832, 870, 1036
Hpy188I TCNGA 4 cut(s) 222, 351, 898, 1196
Hpy188III TCNNGA 8 cut(s) 90, 150, 506, 719, 785, 1057, 1074, 1221
Hpy8I GTNNAC 6 cut(s) 227, 321, 390, 832, 870, 1036
Hpy99I CGWCG 2 cut(s) 48, 1222
HpyAV CCTTC 3 cut(s) 782, 1004, 1310
HpyCH4III ACNGT 5 cut(s) 294, 316, 325, 916, 1156
HpyCH4IV ACGT 1 cut(s) 246
HpyCH4V TGCA 2 cut(s) 770, 1121
HpyF10VI GCNNNNNNNGC 4 cut(s) 770, 908, 1174, 1317
HpyF3I CTNAG 7 cut(s) 124, 129, 221, 507, 609, 960, 972
HpySE526I ACGT 1 cut(s) 246
Hsp92II CATG 8 cut(s) 9, 83, 174, 770, 929, 941, 956, 1024
Ksp22I TGATCA 2 cut(s) 351, 724
KspAI GTTAAC 1 cut(s) 832
Kzo9I GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
LmnI GCTCC 1 cut(s) 1153
Lsp1109I GCAGC 2 cut(s) 782, 864
LweI GCATC 3 cut(s) 538, 889, 1130
MaeI CTAG 2 cut(s) 309, 777
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 3 cut(s) 82, 552, 1113
MalI GATC 8 cut(s) 76, 169, 252, 353, 711, 726, 1029, 1234
MboI GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
MfeI CAATTG 1 cut(s) 105
MhlI GDGCHC 1 cut(s) 333
MluCI AATT 3 cut(s) 105, 452, 486
MluI ACGCGT 1 cut(s) 834
MlyI GAGTC 2 cut(s) 232, 493
MroXI GAANNNNTTC 2 cut(s) 381, 1320
MseI TTAA 6 cut(s) 164, 465, 645, 816, 831, 882
MspR9I CCNGG 1 cut(s) 288
MunI CAATTG 1 cut(s) 105
MvaI CCWGG 1 cut(s) 288
MvnI CGCG 3 cut(s) 151, 206, 836
MwoI GCNNNNNNNGC 4 cut(s) 770, 908, 1174, 1317
NdeII GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
NlaIII CATG 8 cut(s) 9, 83, 174, 770, 929, 941, 956, 1024
NlaIV GGNNCC 1 cut(s) 340
NmeAIII GCCGAG 1 cut(s) 162
NruI TCGCGA 1 cut(s) 151
NspI RCATGY 1 cut(s) 956
PciI ACATGT 1 cut(s) 952
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 1214
PdmI GAANNNNTTC 2 cut(s) 381, 1320
PfeI GAWTC 7 cut(s) 35, 64, 93, 201, 382, 733, 755
PkrI GCNGC 2 cut(s) 772, 879
PleI GAGTC 2 cut(s) 231, 493
PpsI GAGTC 2 cut(s) 231, 493
PscI ACATGT 1 cut(s) 952
Psp6I CCWGG 1 cut(s) 286
PspFI CCCAGC 2 cut(s) 851, 1168
PspGI CCWGG 1 cut(s) 286
PspN4I GGNNCC 1 cut(s) 340
PspPI GGNCC 3 cut(s) 284, 946, 1003
PsrI GAACNNNNNNTAC 2 cut(s) 304, 336
PstNI CAGNNNCTG 1 cut(s) 902
RruI TCGCGA 1 cut(s) 151
RsaI GTAC 3 cut(s) 11, 389, 1306
RsaNI GTAC 3 cut(s) 10, 388, 1305
SaqAI TTAA 6 cut(s) 164, 465, 645, 816, 831, 882
SatI GCNGC 2 cut(s) 771, 878
Sau3AI GATC 8 cut(s) 74, 167, 250, 351, 709, 724, 1027, 1232
Sau96I GGNCC 3 cut(s) 284, 946, 1003
SchI GAGTC 2 cut(s) 232, 493
ScrFI CCNGG 1 cut(s) 288
SduI GDGCHC 1 cut(s) 333
SfaNI GCATC 3 cut(s) 538, 889, 1130
SinI GGWCC 2 cut(s) 284, 1003
SmlI CTYRAG 2 cut(s) 1057, 1248
SmoI CTYRAG 2 cut(s) 1057, 1248
SpeI ACTAGT 1 cut(s) 776
Sse9I AATT 3 cut(s) 105, 452, 486
SsiI CCGC 3 cut(s) 941, 1047, 1127
SspMI CTAG 2 cut(s) 309, 777
StyD4I CCNGG 1 cut(s) 286
StyI CCWWGG 1 cut(s) 478
TaaI ACNGT 5 cut(s) 294, 316, 325, 916, 1156
TaiI ACGT 1 cut(s) 249
TaqI TCGA 6 cut(s) 33, 73, 89, 253, 419, 1208
TasI AATT 3 cut(s) 105, 452, 486
TfiI GAWTC 7 cut(s) 35, 64, 93, 201, 382, 733, 755
Tru1I TTAA 6 cut(s) 164, 465, 645, 816, 831, 882
Tru9I TTAA 6 cut(s) 164, 465, 645, 816, 831, 882
TscAI CASTG 3 cut(s) 877, 919, 1161
TseI GCWGC 2 cut(s) 770, 877
TspDTI ATGAA 2 cut(s) 397, 707
TspGWI ACGGA 4 cut(s) 204, 331, 375, 1206
TspRI CASTG 3 cut(s) 877, 919, 1161
VpaK11BI GGWCC 2 cut(s) 284, 1003
XapI RAATTY 1 cut(s) 486
XceI RCATGY 1 cut(s) 956
XmnI GAANNNNTTC 2 cut(s) 381, 1320
XspI CTAG 2 cut(s) 309, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.