Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000554.1

Orthogroup ID

OG0000604

Physical Location & Seq

Genomic Coordinates Forward (+)

220890 .. 222724

Gene Structure 1835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000554.1_g000047.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

atgtcatacaatagaagagccaagcttatgctcgataattttcgaggattcacattaaggattgtacccaaagaggtaactagaaaacccatctcgagaatttactcaacgttgtattcgactctggcctccagcaaacccaagtttccaggcttttcttcttcttcttcttggtataaaccaattccacaactcggaagaatcataagaacagctcaaaacagtccctttttaggctgtgctaatagatattaccacggtgaggttccaaaccgctccggccggttcaggactaaggggcaccactggtgcgcctgggttaggacagacaataggaggttgtgggctgcgccttttttgggttttggggttttcatcgccttatgttggagcaggtttgagactattccctactcaaaacgaacccactttgtgattgtgagaagagaatgggagaagtttctgggagatttaacatttgtgatgatgaaaatagagggaacgataggcagaacattgcctgatggagacttgcaaactaggcgtgttaggcgcattggcaatgaaataactcaggggttgatgagaggcataactagggaggatcaagagaagggacgtcggtggtggcgaggctctagagtcgccacttcgcatttggattttttgaagtgggagttctatgtagtggaccaacctgatattatcaatgcatattgcttgttcggcggcaagattttggtctacacagggttgtttaggtattttataagtgatgaggagatagctgccatactttgtcacgaggttgggcatgctgtggctcgacattatgcagaggccattacaaaagacttgtggcttctaatcccacgactagttttcaacttctttcaatgttttagcggtgcggttgctgcgcatgcatacacattcgacggattgtgcaaccttttattcactcttccttttgaacgaaggagagaactggaggcggattacattgggctgttgttgcttgcttcggccgggtatgatcctagggttgctctagatgtgtgccagaagttcgataagcttgctggtggatctccgaaccagaaagattatctttctacccatccaaccgggaaaaagagagctgaaaagctggctcaatctcgcgtcatggaagaagcactctctatataccgggaagtagaagctggacgaggggccgggcagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009987 GO:0016020 GO:0016043 GO:0016787 GO:0019538 GO:0019866 GO:0023052 GO:0030163 GO:0031090 GO:0031929 GO:0031966 GO:0031967 GO:0031975 GO:0035556 GO:0035694 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M48

Protein Analysis

408

Amino Acids

47.03

Weight (kDa)

9.78

Isoelectric Point (pI)

42.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51740 AT5G51740 AT5G51740
fragaria_vesca	FvH4_7g28431 FvH4_7g28432
malus_domestica	MD01G1187900.v1.1 MD07G1015000.v1.1 MD07G1260500.v1.1
prunus_persica	Prupe.2G284300_v2.0.a1 Prupe.2G284400_v2.0.a1
pyrus_communis	pycom01g19990 pycom07g23380 pycom07g23540 pycom07g23740
rosa_chinensis	RchiOBHm_Chr1g0342951 RchiOBHm_Chr1g0375391 RchiOBHm_Chr1g0375401 RchiOBHm_Chr1g0375411 RchiOBHm_Chr2g0123811 RchiOBHm_Chr4g0391111 RchiOBHm_Chr4g0406741 RchiOBHm_Chr5g0031101 RchiOBHm_Chr7g0214411
rosa_laevigata	RLG00000004191 RLG00000019338 RLG00000026663 RLG00000026664
rosa_multiflora	Rmu_sc0000554.1_g000043 Rmu_sc0000554.1_g000047 Rmu_sc0001966.1_g000052 Rmu_sc0002169.1_g000012 Rmu_sc0006244.1_g000048 Rmu_sc0007176.1_g000002 Rmu_sc0014983.1_g000004 Rmu_sc0020175.1_g000003 Rmu_sc0021990.1_g000003 Rmu_ssc0000106.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029630 Rroxscaffold_1G00049160 Rroxscaffold_3G00235470 Rroxscaffold_3G00235480 Rroxscaffold_4G00282790 Rroxscaffold_4G00282800 Rroxscaffold_5G00357450 Rroxscaffold_5G00360550
rosa_rugosa	Rorug01G0390800 Rorug01G0390800 Rorug06G0413000
rosa_samantha	Rh1AG177000 Rh1AG401300 Rh1AG401400 Rh1BG362700 Rh1BG363000 Rh1BG363100 Rh1BG366200 Rh1CG376300 Rh1CG378900 Rh1DG069900 Rh1DG393500 Rh1DG393800 Rh1DG393900 Rh1DG396800 Rh2AG166900 Rh2DG172200 Rh2DG463600 Rh3CG274900 Rh4BG226700 Rh5AG215800 Rh5AG215900 Rh5BG215300 Rh5CG238800 Rh5DG219700 Rh5DG219800 Rh6BG136300 Rh6CG134700 Rh6DG121000 Rh7CG183600 Rh7DG190700
rosa_wichuraiana	Rw1G035620 Rw1G035630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	770
AatII	GACGTC	1 cut(s)	622
Acc16I	TGCGCA	1 cut(s)	921
Acc36I	ACCTGC	1 cut(s)	384
AccB1I	GGYRCC	1 cut(s)	300
AccBSI	CCGCTC	1 cut(s)	276
AccI	GTMKAC	1 cut(s)	744
AccII	CGCG	1 cut(s)	1164
AciI	CCGC	5 cut(s)	274, 729, 906, 911, 995
AclI	AACGTT	1 cut(s)	110
AclWI	GGATC	3 cut(s)	612, 1031, 1096
AcoI	YGGCCR	2 cut(s)	280, 1026
AcsI	RAATTY	1 cut(s)	99
AcyI	GRCGYC	1 cut(s)	619
AdeI	CACNNNGTG	1 cut(s)	433
AfaI	GTAC	1 cut(s)	66
AfiI	CCNNNNNNNGG	6 cut(s)	194, 233, 262, 321, 359, 387
AgsI	TTSAA	4 cut(s)	670, 886, 896, 974
AhlI	ACTAGT	1 cut(s)	877
AjnI	CCWGG	2 cut(s)	148, 314
AluBI	AGCT	7 cut(s)	25, 215, 788, 1078, 1142, 1150, 1205
AluI	AGCT	7 cut(s)	25, 215, 788, 1078, 1142, 1150, 1205
Alw26I	GTCTC	2 cut(s)	395, 522
AlwI	GGATC	3 cut(s)	612, 1031, 1096
Ama87I	CYCGRG	1 cut(s)	94
AoxI	GGCC	5 cut(s)	126, 280, 840, 1026, 1215
ApeKI	GCWGC	3 cut(s)	347, 788, 917
ApoI	RAATTY	1 cut(s)	99
AspA2I	CCTAGG	1 cut(s)	1040
AspLEI	GCGC	4 cut(s)	314, 352, 555, 922
AspS9I	GGNCC	2 cut(s)	691, 1215
AsuC2I	CCSGG	4 cut(s)	1030, 1129, 1193, 1219
AsuHPI	GGTGA	1 cut(s)	272
AvaI	CYCGRG	1 cut(s)	94
AvaII	GGWCC	1 cut(s)	691
AvrII	CCTAGG	1 cut(s)	1040
BaeGI	GKGCMC	1 cut(s)	303
BanI	GGYRCC	1 cut(s)	300
BauI	CACGAG	1 cut(s)	803
BbvI	GCAGC	3 cut(s)	334, 775, 904
BccI	CCATC	3 cut(s)	98, 518, 1128
BcgI	CGANNNNNNTGC	2 cut(s)	1061, 1095
BciT130I	CCWGG	2 cut(s)	150, 316
BcnI	CCSGG	4 cut(s)	1030, 1129, 1193, 1219
BcoDI	GTCTC	2 cut(s)	395, 522
BcuI	ACTAGT	1 cut(s)	877
BfaI	CTAG	7 cut(s)	81, 540, 597, 639, 878, 1041, 1052
BfuAI	ACCTGC	1 cut(s)	384
BisI	GCNGC	4 cut(s)	348, 730, 789, 918
BlnI	CCTAGG	1 cut(s)	1040
BlsI	GCNGC	4 cut(s)	349, 731, 790, 919
Bme1390I	CCNGG	6 cut(s)	150, 316, 1030, 1129, 1193, 1219
Bme18I	GGWCC	1 cut(s)	691
BmeT110I	CYCGRG	1 cut(s)	94
BmgT120I	GGNCC	2 cut(s)	691, 1215
BmiI	GGNNCC	3 cut(s)	267, 302, 1216
BmrFI	CCNGG	6 cut(s)	150, 316, 1030, 1129, 1193, 1219
BpmI	CTGGAG	2 cut(s)	115, 1010
BpuMI	CCSGG	4 cut(s)	1030, 1129, 1193, 1219
BsaHI	GRCGYC	1 cut(s)	619
BsaJI	CCNNGG	3 cut(s)	256, 315, 1040
Bsc4I	CCNNNNNNNGG	6 cut(s)	194, 233, 262, 321, 359, 387
Bse118I	RCCGGY	1 cut(s)	282
Bse1I	ACTGG	2 cut(s)	311, 993
Bse3DI	GCAATG	2 cut(s)	515, 568
BseBI	CCWGG	2 cut(s)	150, 316
BseDI	CCNNGG	3 cut(s)	256, 315, 1040
BseGI	GGATG	1 cut(s)	1120
BseLI	CCNNNNNNNGG	6 cut(s)	194, 233, 262, 321, 359, 387
BseMI	GCAATG	2 cut(s)	515, 568
BseMII	CTCAG	1 cut(s)	587
BseNI	ACTGG	2 cut(s)	311, 993
BseRI	GAGGAG	1 cut(s)	794
BseSI	GKGCMC	1 cut(s)	303
BseX3I	CGGCCG	2 cut(s)	280, 1026
BseXI	GCAGC	3 cut(s)	334, 775, 904
Bsh1236I	CGCG	1 cut(s)	1164
Bsh1285I	CGRYCG	2 cut(s)	283, 1029
BshFI	GGCC	5 cut(s)	128, 282, 842, 1028, 1217
BshNI	GGYRCC	1 cut(s)	300
BsiEI	CGRYCG	2 cut(s)	283, 1029
BsiHKCI	CYCGRG	1 cut(s)	94
BsiSI	CCGG	6 cut(s)	279, 283, 1029, 1128, 1192, 1218
BslFI	GGGAC	2 cut(s)	210, 630
BslI	CCNNNNNNNGG	6 cut(s)	194, 233, 262, 321, 359, 387
BsmAI	GTCTC	2 cut(s)	395, 522
BsmFI	GGGAC	2 cut(s)	210, 630
BsnI	GGCC	5 cut(s)	128, 282, 842, 1028, 1217
BsoBI	CYCGRG	1 cut(s)	94
Bsp1286I	GDGCHC	1 cut(s)	303
Bsp143I	GATC	3 cut(s)	604, 1036, 1088
BspACI	CCGC	5 cut(s)	274, 729, 906, 911, 995
BspANI	GGCC	5 cut(s)	128, 282, 842, 1028, 1217
BspCNI	CTCAG	1 cut(s)	586
BspFNI	CGCG	1 cut(s)	1164
BspLI	GGNNCC	3 cut(s)	267, 302, 1216
BspMI	ACCTGC	1 cut(s)	384
BspPI	GGATC	3 cut(s)	612, 1031, 1096
BspQI	GCTCTTC	1 cut(s)	10
BspT107I	GGYRCC	1 cut(s)	300
BsrBI	CCGCTC	1 cut(s)	276
BsrDI	GCAATG	2 cut(s)	515, 568
BsrFI	RCCGGY	1 cut(s)	282
BsrI	ACTGG	2 cut(s)	311, 993
BssAI	RCCGGY	1 cut(s)	282
BssECI	CCNNGG	3 cut(s)	256, 315, 1040
BssMI	GATC	3 cut(s)	604, 1036, 1088
BssNI	GRCGYC	1 cut(s)	619
BssSI	CACGAG	1 cut(s)	803
BssT1I	CCWWGG	1 cut(s)	1040
Bst2BI	CACGAG	1 cut(s)	803
Bst2UI	CCWGG	2 cut(s)	150, 316
Bst4CI	ACNGT	2 cut(s)	224, 260
Bst6I	CTCTTC	3 cut(s)	10, 439, 969
BstACI	GRCGYC	1 cut(s)	619
BstC8I	GCNNGC	5 cut(s)	816, 924, 1020, 1080, 1152
BstDEI	CTNAG	2 cut(s)	294, 573
BstDSI	CCRYGG	1 cut(s)	256
BstENI	CCTNNNNNAGG	1 cut(s)	319
BstF5I	GGATG	1 cut(s)	1120
BstFNI	CGCG	1 cut(s)	1164
BstHHI	GCGC	4 cut(s)	314, 352, 555, 922
BstKTI	GATC	3 cut(s)	607, 1039, 1091
BstMAI	GTCTC	2 cut(s)	395, 522
BstMBI	GATC	3 cut(s)	604, 1036, 1088
BstMCI	CGRYCG	2 cut(s)	283, 1029
BstMWI	GCNNNNNNNGC	6 cut(s)	541, 550, 726, 917, 923, 1015
BstNI	CCWGG	2 cut(s)	150, 316
BstNSI	RCATGY	2 cut(s)	818, 926
BstSCI	CCNGG	6 cut(s)	148, 314, 1028, 1127, 1191, 1217
BstSLI	GKGCMC	1 cut(s)	303
BstUI	CGCG	1 cut(s)	1164
BstV1I	GCAGC	3 cut(s)	334, 775, 904
BstX2I	RGATCY	1 cut(s)	1088
BstYI	RGATCY	1 cut(s)	1088
BstZI	CGGCCG	2 cut(s)	280, 1026
BsuRI	GGCC	5 cut(s)	128, 282, 842, 1028, 1217
BtgI	CCRYGG	1 cut(s)	256
BtgZI	GCGATG	1 cut(s)	361
BtsCI	GGATG	1 cut(s)	1120
BtsIMutI	CAGTG	1 cut(s)	304
BveI	ACCTGC	1 cut(s)	384
Cac8I	GCNNGC	5 cut(s)	816, 924, 1020, 1080, 1152
CfoI	GCGC	4 cut(s)	314, 352, 555, 922
Cfr10I	RCCGGY	1 cut(s)	282
Cfr13I	GGNCC	2 cut(s)	691, 1215
CseI	GACGC	1 cut(s)	1153
Csp6I	GTAC	1 cut(s)	65
CviAII	CATG	3 cut(s)	815, 923, 1168
CviQI	GTAC	1 cut(s)	65
DdeI	CTNAG	2 cut(s)	294, 573
DpnI	GATC	3 cut(s)	606, 1038, 1090
DpnII	GATC	3 cut(s)	604, 1036, 1088
DraIII	CACNNNGTG	1 cut(s)	433
EaeI	YGGCCR	2 cut(s)	280, 1026
EagI	CGGCCG	2 cut(s)	280, 1026
Eam1104I	CTCTTC	3 cut(s)	10, 439, 969
EarI	CTCTTC	3 cut(s)	10, 439, 969
EciI	GGCGGA	1 cut(s)	1010
EclXI	CGGCCG	2 cut(s)	280, 1026
Eco130I	CCWWGG	1 cut(s)	1040
Eco47I	GGWCC	1 cut(s)	691
Eco52I	CGGCCG	2 cut(s)	280, 1026
Eco88I	CYCGRG	1 cut(s)	94
EcoNI	CCTNNNNNAGG	1 cut(s)	319
EcoRII	CCWGG	2 cut(s)	148, 314
EcoT14I	CCWWGG	1 cut(s)	1040
EcoT22I	ATGCAT	2 cut(s)	715, 928
ErhI	CCWWGG	1 cut(s)	1040
FaeI	CATG	3 cut(s)	818, 926, 1171
FalI	AAGNNNNNCTT	2 cut(s)	1095, 1127
FaqI	GGGAC	2 cut(s)	210, 630
FatI	CATG	3 cut(s)	814, 922, 1167
FblI	GTMKAC	1 cut(s)	744
Fnu4HI	GCNGC	4 cut(s)	348, 730, 789, 918
FokI	GGATG	1 cut(s)	1107
Fsp4HI	GCNGC	4 cut(s)	348, 730, 789, 918
FspBI	CTAG	7 cut(s)	81, 540, 597, 639, 878, 1041, 1052
FspI	TGCGCA	1 cut(s)	921
GlaI	GCGC	4 cut(s)	313, 351, 554, 921
GluI	GCNGC	4 cut(s)	348, 730, 789, 918
GsuI	CTGGAG	2 cut(s)	115, 1010
HaeIII	GGCC	5 cut(s)	128, 282, 842, 1028, 1217
HapII	CCGG	6 cut(s)	279, 283, 1029, 1128, 1192, 1218
HgaI	GACGC	1 cut(s)	1153
HhaI	GCGC	4 cut(s)	314, 352, 555, 922
Hin1I	GRCGYC	1 cut(s)	619
Hin1II	CATG	3 cut(s)	818, 926, 1171
Hin6I	GCGC	4 cut(s)	312, 350, 553, 920
HinP1I	GCGC	4 cut(s)	312, 350, 553, 920
HindIII	AAGCTT	2 cut(s)	23, 1076
HinfI	GANTC	4 cut(s)	48, 121, 201, 642
HpaII	CCGG	6 cut(s)	279, 283, 1029, 1128, 1192, 1218
HphI	GGTGA	1 cut(s)	272
Hpy166II	GTNNAC	2 cut(s)	691, 745
Hpy188I	TCNGA	2 cut(s)	197, 1095
Hpy188III	TCNNGA	7 cut(s)	94, 96, 289, 608, 639, 803, 1052
Hpy8I	GTNNAC	2 cut(s)	691, 745
Hpy99I	CGWCG	2 cut(s)	624, 941
HpyAV	CCTTC	2 cut(s)	607, 972
HpyCH4III	ACNGT	2 cut(s)	224, 260
HpyCH4IV	ACGT	2 cut(s)	110, 619
HpyCH4V	TGCA	5 cut(s)	535, 713, 836, 926, 948
HpyF10VI	GCNNNNNNNGC	6 cut(s)	541, 550, 726, 917, 923, 1015
HpyF3I	CTNAG	2 cut(s)	294, 573
HpySE526I	ACGT	2 cut(s)	110, 619
Hsp92I	GRCGYC	1 cut(s)	619
Hsp92II	CATG	3 cut(s)	818, 926, 1171
HspAI	GCGC	4 cut(s)	312, 350, 553, 920
Kzo9I	GATC	3 cut(s)	604, 1036, 1088
LguI	GCTCTTC	1 cut(s)	10
LmnI	GCTCC	2 cut(s)	281, 390
Lsp1109I	GCAGC	3 cut(s)	334, 775, 904
MaeI	CTAG	7 cut(s)	81, 540, 597, 639, 878, 1041, 1052
MaeII	ACGT	2 cut(s)	110, 619
MaeIII	GTNAC	2 cut(s)	76, 800
MalI	GATC	3 cut(s)	606, 1038, 1090
MbiI	CCGCTC	1 cut(s)	276
MboI	GATC	3 cut(s)	604, 1036, 1088
MboII	GAAGA	9 cut(s)	27, 150, 153, 156, 159, 210, 456, 956, 1184
MflI	RGATCY	1 cut(s)	1088
MhlI	GDGCHC	1 cut(s)	303
MluCI	AATT	3 cut(s)	37, 99, 183
MlyI	GAGTC	2 cut(s)	115, 651
MmeI	TCCRAC	2 cut(s)	368, 1148
Mph1103I	ATGCAT	2 cut(s)	715, 928
MseI	TTAA	2 cut(s)	56, 473
MspI	CCGG	6 cut(s)	279, 283, 1029, 1128, 1192, 1218
MspR9I	CCNGG	6 cut(s)	150, 316, 1030, 1129, 1193, 1219
MvaI	CCWGG	2 cut(s)	150, 316
MvnI	CGCG	1 cut(s)	1164
MwoI	GCNNNNNNNGC	6 cut(s)	541, 550, 726, 917, 923, 1015
NciI	CCSGG	4 cut(s)	1030, 1129, 1193, 1219
NdeII	GATC	3 cut(s)	604, 1036, 1088
NlaIII	CATG	3 cut(s)	818, 926, 1171
NlaIV	GGNNCC	3 cut(s)	267, 302, 1216
NmuCI	GTSAC	1 cut(s)	800
NsbI	TGCGCA	1 cut(s)	921
NsiI	ATGCAT	2 cut(s)	715, 928
NspI	RCATGY	2 cut(s)	818, 926
PaeI	GCATGC	2 cut(s)	818, 926
PaeR7I	CTCGAG	1 cut(s)	94
PciSI	GCTCTTC	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	2 cut(s)	116, 628
PfeI	GAWTC	2 cut(s)	48, 201
PkrI	GCNGC	4 cut(s)	349, 731, 790, 919
PleI	GAGTC	2 cut(s)	115, 650
PpsI	GAGTC	2 cut(s)	115, 650
PsiI	TTATAA	1 cut(s)	770
Psp1406I	AACGTT	1 cut(s)	110
Psp6I	CCWGG	2 cut(s)	148, 314
PspGI	CCWGG	2 cut(s)	148, 314
PspN4I	GGNNCC	3 cut(s)	267, 302, 1216
PspPI	GGNCC	2 cut(s)	691, 1215
PsuI	RGATCY	1 cut(s)	1088
RsaI	GTAC	1 cut(s)	66
RsaNI	GTAC	1 cut(s)	65
SapI	GCTCTTC	1 cut(s)	10
SaqAI	TTAA	2 cut(s)	56, 473
SatI	GCNGC	4 cut(s)	348, 730, 789, 918
Sau3AI	GATC	3 cut(s)	604, 1036, 1088
Sau96I	GGNCC	2 cut(s)	691, 1215
SchI	GAGTC	2 cut(s)	115, 651
ScrFI	CCNGG	6 cut(s)	150, 316, 1030, 1129, 1193, 1219
SduI	GDGCHC	1 cut(s)	303
Sfr274I	CTCGAG	1 cut(s)	94
SinI	GGWCC	1 cut(s)	691
SlaI	CTCGAG	1 cut(s)	94
SmlI	CTYRAG	1 cut(s)	94
SmoI	CTYRAG	1 cut(s)	94
SpeI	ACTAGT	1 cut(s)	877
SphI	GCATGC	2 cut(s)	818, 926
Sse9I	AATT	3 cut(s)	37, 99, 183
SsiI	CCGC	5 cut(s)	274, 729, 906, 911, 995
SspMI	CTAG	7 cut(s)	81, 540, 597, 639, 878, 1041, 1052
StyD4I	CCNGG	6 cut(s)	148, 314, 1028, 1127, 1191, 1217
StyI	CCWWGG	1 cut(s)	1040
TaaI	ACNGT	2 cut(s)	224, 260
TaiI	ACGT	2 cut(s)	113, 622
TaqI	TCGA	7 cut(s)	33, 43, 95, 119, 826, 936, 1071
TasI	AATT	3 cut(s)	37, 99, 183
TauI	GCSGC	1 cut(s)	732
TfiI	GAWTC	2 cut(s)	48, 201
Tru1I	TTAA	2 cut(s)	56, 473
Tru9I	TTAA	2 cut(s)	56, 473
TscAI	CASTG	1 cut(s)	311
TseFI	GTSAC	1 cut(s)	800
TseI	GCWGC	3 cut(s)	347, 788, 917
Tsp45I	GTSAC	1 cut(s)	800
TspDTI	ATGAA	3 cut(s)	364, 503, 579
TspGWI	ACGGA	1 cut(s)	954
TspRI	CASTG	1 cut(s)	311
VpaK11BI	GGWCC	1 cut(s)	691
XagI	CCTNNNNNAGG	1 cut(s)	319
XapI	RAATTY	1 cut(s)	99
XbaI	TCTAGA	2 cut(s)	638, 1051
XceI	RCATGY	2 cut(s)	818, 926
XcmI	CCANNNNNNNNNTGG	1 cut(s)	655
XhoI	CTCGAG	1 cut(s)	94
XmaJI	CCTAGG	1 cut(s)	1040
XmiI	GTMKAC	1 cut(s)	744
XspI	CTAG	7 cut(s)	81, 540, 597, 639, 878, 1041, 1052
ZraI	GACGTC	1 cut(s)	620
Zsp2I	ATGCAT	2 cut(s)	715, 928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.