Mitochondrial metalloendopeptidase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peptidase_M48 | PF01435 | 263 - 340 | 3.5e-19 | Peptidase family M48 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 247, 649 |
| Acc36I | ACCTGC | 2 cut(s) | 247, 649 |
| AccI | GTMKAC | 2 cut(s) | 33, 425 |
| AccIII | TCCGGA | 1 cut(s) | 42 |
| AciI | CCGC | 6 cut(s) | 191, 209, 253, 262, 345, 692 |
| AclWI | GGATC | 2 cut(s) | 255, 1237 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AcvI | CACGTG | 2 cut(s) | 244, 710 |
| AcyI | GRCGYC | 1 cut(s) | 36 |
| AfaI | GTAC | 1 cut(s) | 1088 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 215, 277, 319 |
| AflII | CTTAAG | 2 cut(s) | 887, 1063 |
| AgsI | TTSAA | 5 cut(s) | 307, 484, 562, 802, 1187 |
| AjnI | CCWGG | 1 cut(s) | 540 |
| AleI | CACNNNNGTG | 1 cut(s) | 289 |
| AluBI | AGCT | 4 cut(s) | 48, 140, 445, 1021 |
| AluI | AGCT | 4 cut(s) | 48, 140, 445, 1021 |
| Alw26I | GTCTC | 2 cut(s) | 377, 644 |
| AlwI | GGATC | 2 cut(s) | 255, 1237 |
| Ama87I | CYCGRG | 2 cut(s) | 313, 625 |
| Aor13HI | TCCGGA | 1 cut(s) | 42 |
| AoxI | GGCC | 3 cut(s) | 126, 280, 294 |
| ApaI | GGGCCC | 1 cut(s) | 284 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 614, 646 |
| AspS9I | GGNCC | 5 cut(s) | 280, 281, 294, 310, 823 |
| AsuC2I | CCSGG | 3 cut(s) | 478, 512, 855 |
| AsuHPI | GGTGA | 2 cut(s) | 500, 689 |
| AvaI | CYCGRG | 2 cut(s) | 313, 625 |
| AvaII | GGWCC | 2 cut(s) | 310, 823 |
| BaeGI | GKGCMC | 1 cut(s) | 284 |
| BanII | GRGCYC | 1 cut(s) | 284 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1075, 1107 |
| BbrPI | CACGTG | 2 cut(s) | 244, 710 |
| BbvCI | CCTCAGC | 1 cut(s) | 966 |
| BccI | CCATC | 3 cut(s) | 661, 1159, 1214 |
| BceAI | ACGGC | 1 cut(s) | 14 |
| BciT130I | CCWGG | 1 cut(s) | 542 |
| BclI | TGATCA | 1 cut(s) | 580 |
| BcnI | CCSGG | 3 cut(s) | 478, 512, 855 |
| BcoDI | GTCTC | 2 cut(s) | 377, 644 |
| BfaI | CTAG | 1 cut(s) | 1240 |
| BfmI | CTRYAG | 1 cut(s) | 10 |
| BfrI | CTTAAG | 2 cut(s) | 887, 1063 |
| BfuAI | ACCTGC | 2 cut(s) | 247, 649 |
| BisI | GCNGC | 2 cut(s) | 254, 263 |
| BlsI | GCNGC | 2 cut(s) | 255, 264 |
| Bme1390I | CCNGG | 4 cut(s) | 478, 512, 542, 855 |
| Bme18I | GGWCC | 2 cut(s) | 310, 823 |
| BmeT110I | CYCGRG | 2 cut(s) | 313, 625 |
| BmgT120I | GGNCC | 5 cut(s) | 280, 281, 294, 310, 823 |
| BmiI | GGNNCC | 3 cut(s) | 281, 282, 312 |
| BmrFI | CCNGG | 4 cut(s) | 478, 512, 542, 855 |
| BmsI | GCATC | 4 cut(s) | 544, 766, 895, 981 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 9, 41 |
| BpmI | CTGGAG | 1 cut(s) | 70 |
| Bpu10I | CCTNAGC | 1 cut(s) | 966 |
| BpuMI | CCSGG | 3 cut(s) | 478, 512, 855 |
| BsaAI | YACGTR | 2 cut(s) | 244, 710 |
| BsaHI | GRCGYC | 1 cut(s) | 36 |
| BsaJI | CCNNGG | 2 cut(s) | 314, 612 |
| BsaWI | WCCGGW | 1 cut(s) | 42 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 68, 98, 631, 661 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 215, 277, 319 |
| Bse118I | RCCGGY | 1 cut(s) | 288 |
| Bse1I | ACTGG | 1 cut(s) | 305 |
| BseAI | TCCGGA | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 542 |
| BseDI | CCNNGG | 2 cut(s) | 314, 612 |
| BseGI | GGATG | 2 cut(s) | 721, 781 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 215, 277, 319 |
| BseMII | CTCAG | 1 cut(s) | 957 |
| BseNI | ACTGG | 1 cut(s) | 305 |
| BseRI | GAGGAG | 3 cut(s) | 331, 629, 686 |
| BseSI | GKGCMC | 1 cut(s) | 284 |
| BseYI | CCCAGC | 1 cut(s) | 445 |
| BsgI | GTGCAG | 1 cut(s) | 677 |
| BshFI | GGCC | 3 cut(s) | 128, 282, 296 |
| BsiHKCI | CYCGRG | 2 cut(s) | 313, 625 |
| BsiSI | CCGG | 7 cut(s) | 43, 225, 271, 289, 477, 512, 854 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 215, 277, 319 |
| BsmAI | GTCTC | 2 cut(s) | 377, 644 |
| BsnI | GGCC | 3 cut(s) | 128, 282, 296 |
| BsoBI | CYCGRG | 2 cut(s) | 313, 625 |
| Bsp120I | GGGCCC | 1 cut(s) | 280 |
| Bsp1286I | GDGCHC | 1 cut(s) | 284 |
| Bsp13I | TCCGGA | 1 cut(s) | 42 |
| Bsp143I | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| BspACI | CCGC | 6 cut(s) | 191, 209, 253, 262, 345, 692 |
| BspANI | GGCC | 3 cut(s) | 128, 282, 296 |
| BspCNI | CTCAG | 1 cut(s) | 958 |
| BspEI | TCCGGA | 1 cut(s) | 42 |
| BspHI | TCATGA | 1 cut(s) | 931 |
| BspLI | GGNNCC | 3 cut(s) | 281, 282, 312 |
| BspMI | ACCTGC | 2 cut(s) | 247, 649 |
| BspPI | GGATC | 2 cut(s) | 255, 1237 |
| BspTI | CTTAAG | 2 cut(s) | 887, 1063 |
| BsrFI | RCCGGY | 1 cut(s) | 288 |
| BsrI | ACTGG | 1 cut(s) | 305 |
| BssAI | RCCGGY | 1 cut(s) | 288 |
| BssECI | CCNNGG | 2 cut(s) | 314, 612 |
| BssMI | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| BssNI | GRCGYC | 1 cut(s) | 36 |
| Bst2UI | CCWGG | 1 cut(s) | 542 |
| Bst4CI | ACNGT | 2 cut(s) | 388, 655 |
| Bst6I | CTCTTC | 2 cut(s) | 557, 1147 |
| BstACI | GRCGYC | 1 cut(s) | 36 |
| BstAFI | CTTAAG | 2 cut(s) | 887, 1063 |
| BstBAI | YACGTR | 2 cut(s) | 244, 710 |
| BstC8I | GCNNGC | 4 cut(s) | 209, 501, 945, 1180 |
| BstDEI | CTNAG | 1 cut(s) | 966 |
| BstF5I | GGATG | 2 cut(s) | 721, 781 |
| BstKTI | GATC | 4 cut(s) | 250, 583, 999, 1232 |
| BstMAI | GTCTC | 2 cut(s) | 377, 644 |
| BstMBI | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 26, 35, 259, 262, 271, 914, 1027 |
| BstNI | CCWGG | 1 cut(s) | 542 |
| BstNSI | RCATGY | 2 cut(s) | 947, 1182 |
| BstSCI | CCNGG | 4 cut(s) | 476, 510, 540, 853 |
| BstSFI | CTRYAG | 1 cut(s) | 10 |
| BstSLI | GKGCMC | 1 cut(s) | 284 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 291 |
| BsuRI | GGCC | 3 cut(s) | 128, 282, 296 |
| BtsCI | GGATG | 2 cut(s) | 721, 781 |
| BtsIMutI | CAGTG | 1 cut(s) | 660 |
| BveI | ACCTGC | 2 cut(s) | 247, 649 |
| Cac8I | GCNNGC | 4 cut(s) | 209, 501, 945, 1180 |
| CciI | TCATGA | 1 cut(s) | 931 |
| Cfr10I | RCCGGY | 1 cut(s) | 288 |
| Cfr13I | GGNCC | 5 cut(s) | 280, 281, 294, 310, 823 |
| CseI | GACGC | 1 cut(s) | 44 |
| Csp6I | GTAC | 1 cut(s) | 1087 |
| CviAII | CATG | 5 cut(s) | 578, 598, 932, 944, 1179 |
| CviQI | GTAC | 1 cut(s) | 1087 |
| DdeI | CTNAG | 1 cut(s) | 966 |
| DpnI | GATC | 4 cut(s) | 249, 582, 998, 1231 |
| DpnII | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| Eam1104I | CTCTTC | 2 cut(s) | 557, 1147 |
| EarI | CTCTTC | 2 cut(s) | 557, 1147 |
| EciI | GGCGGA | 1 cut(s) | 707 |
| Eco24I | GRGCYC | 1 cut(s) | 284 |
| Eco47I | GGWCC | 2 cut(s) | 310, 823 |
| Eco72I | CACGTG | 2 cut(s) | 244, 710 |
| Eco88I | CYCGRG | 2 cut(s) | 313, 625 |
| EcoO109I | RGGNCCY | 2 cut(s) | 280, 310 |
| EcoRII | CCWGG | 1 cut(s) | 540 |
| EcoT22I | ATGCAT | 1 cut(s) | 1180 |
| EcoT38I | GRGCYC | 1 cut(s) | 284 |
| FaeI | CATG | 5 cut(s) | 581, 601, 935, 947, 1182 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1057, 1089 |
| FatI | CATG | 5 cut(s) | 577, 597, 931, 943, 1178 |
| FauI | CCCGC | 1 cut(s) | 216 |
| FauNDI | CATATG | 1 cut(s) | 1197 |
| FbaI | TGATCA | 1 cut(s) | 580 |
| FblI | GTMKAC | 2 cut(s) | 33, 425 |
| Fnu4HI | GCNGC | 2 cut(s) | 254, 263 |
| FokI | GGATG | 2 cut(s) | 728, 788 |
| FriOI | GRGCYC | 1 cut(s) | 284 |
| Fsp4HI | GCNGC | 2 cut(s) | 254, 263 |
| FspBI | CTAG | 1 cut(s) | 1240 |
| GluI | GCNGC | 2 cut(s) | 254, 263 |
| GsaI | CCCAGC | 1 cut(s) | 449 |
| GsuI | CTGGAG | 1 cut(s) | 70 |
| HaeIII | GGCC | 3 cut(s) | 128, 282, 296 |
| HapII | CCGG | 7 cut(s) | 43, 225, 271, 289, 477, 512, 854 |
| HgaI | GACGC | 1 cut(s) | 44 |
| Hin1I | GRCGYC | 1 cut(s) | 36 |
| Hin1II | CATG | 5 cut(s) | 581, 601, 935, 947, 1182 |
| HincII | GTYRAC | 3 cut(s) | 34, 426, 1042 |
| HindII | GTYRAC | 3 cut(s) | 34, 426, 1042 |
| HinfI | GANTC | 7 cut(s) | 60, 418, 452, 505, 630, 721, 1139 |
| HpaII | CCGG | 7 cut(s) | 43, 225, 271, 289, 477, 512, 854 |
| HphI | GGTGA | 2 cut(s) | 500, 689 |
| Hpy166II | GTNNAC | 6 cut(s) | 34, 426, 591, 823, 876, 1042 |
| Hpy188I | TCNGA | 2 cut(s) | 613, 1164 |
| Hpy188III | TCNNGA | 7 cut(s) | 43, 57, 87, 97, 725, 932, 1080 |
| Hpy8I | GTNNAC | 6 cut(s) | 34, 426, 591, 823, 876, 1042 |
| Hpy99I | CGWCG | 3 cut(s) | 35, 38, 430 |
| HpyAV | CCTTC | 6 cut(s) | 49, 171, 677, 682, 751, 1077 |
| HpyCH4III | ACNGT | 2 cut(s) | 388, 655 |
| HpyCH4IV | ACGT | 4 cut(s) | 143, 243, 709, 1089 |
| HpyCH4V | TGCA | 3 cut(s) | 658, 1178, 1195 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 26, 35, 259, 262, 271, 914, 1027 |
| HpyF3I | CTNAG | 1 cut(s) | 966 |
| HpySE526I | ACGT | 4 cut(s) | 143, 243, 709, 1089 |
| Hsp92I | GRCGYC | 1 cut(s) | 36 |
| Hsp92II | CATG | 5 cut(s) | 581, 601, 935, 947, 1182 |
| Kpn2I | TCCGGA | 1 cut(s) | 42 |
| Ksp22I | TGATCA | 1 cut(s) | 580 |
| Kzo9I | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| LmnI | GCTCC | 1 cut(s) | 45 |
| LweI | GCATC | 4 cut(s) | 544, 766, 895, 981 |
| MaeI | CTAG | 1 cut(s) | 1240 |
| MaeII | ACGT | 4 cut(s) | 143, 243, 709, 1089 |
| MaeIII | GTNAC | 4 cut(s) | 328, 358, 705, 1090 |
| MalI | GATC | 4 cut(s) | 249, 582, 998, 1231 |
| MboI | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| MboII | GAAGA | 6 cut(s) | 114, 502, 574, 766, 874, 1134 |
| MhlI | GDGCHC | 1 cut(s) | 284 |
| MluCI | AATT | 5 cut(s) | 186, 549, 700, 802, 924 |
| MlyI | GAGTC | 2 cut(s) | 461, 1133 |
| Mph1103I | ATGCAT | 1 cut(s) | 1180 |
| MroI | TCCGGA | 1 cut(s) | 42 |
| MseI | TTAA | 3 cut(s) | 203, 888, 1064 |
| MslI | CAYNNNNRTG | 1 cut(s) | 289 |
| MspCI | CTTAAG | 2 cut(s) | 887, 1063 |
| MspI | CCGG | 7 cut(s) | 43, 225, 271, 289, 477, 512, 854 |
| MspR9I | CCNGG | 4 cut(s) | 478, 512, 542, 855 |
| MvaI | CCWGG | 1 cut(s) | 542 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 26, 35, 259, 262, 271, 914, 1027 |
| NciI | CCSGG | 3 cut(s) | 478, 512, 855 |
| NdeI | CATATG | 1 cut(s) | 1197 |
| NdeII | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| NlaIII | CATG | 5 cut(s) | 581, 601, 935, 947, 1182 |
| NlaIV | GGNNCC | 3 cut(s) | 281, 282, 312 |
| NmeAIII | GCCGAG | 1 cut(s) | 934 |
| NmuCI | GTSAC | 1 cut(s) | 705 |
| NsiI | ATGCAT | 1 cut(s) | 1180 |
| NspI | RCATGY | 2 cut(s) | 947, 1182 |
| OliI | CACNNNNGTG | 1 cut(s) | 289 |
| PaeI | GCATGC | 2 cut(s) | 947, 1182 |
| PagI | TCATGA | 1 cut(s) | 931 |
| PaqCI | CACCTGC | 2 cut(s) | 247, 649 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 104 |
| PfeI | GAWTC | 5 cut(s) | 60, 418, 505, 630, 721 |
| PflFI | GACNNNGTC | 1 cut(s) | 112 |
| PkrI | GCNGC | 2 cut(s) | 255, 264 |
| PleI | GAGTC | 2 cut(s) | 460, 1133 |
| PmaCI | CACGTG | 2 cut(s) | 244, 710 |
| PmlI | CACGTG | 2 cut(s) | 244, 710 |
| PpsI | GAGTC | 2 cut(s) | 460, 1133 |
| Ppu21I | YACGTR | 2 cut(s) | 244, 710 |
| PpuMI | RGGWCCY | 1 cut(s) | 310 |
| Psp5II | RGGWCCY | 1 cut(s) | 310 |
| Psp6I | CCWGG | 1 cut(s) | 540 |
| PspCI | CACGTG | 2 cut(s) | 244, 710 |
| PspFI | CCCAGC | 1 cut(s) | 445 |
| PspGI | CCWGG | 1 cut(s) | 540 |
| PspN4I | GGNNCC | 3 cut(s) | 281, 282, 312 |
| PspOMI | GGGCCC | 1 cut(s) | 280 |
| PspPI | GGNCC | 5 cut(s) | 280, 281, 294, 310, 823 |
| PspPPI | RGGWCCY | 1 cut(s) | 310 |
| PsyI | GACNNNGTC | 1 cut(s) | 112 |
| RsaI | GTAC | 1 cut(s) | 1088 |
| RsaNI | GTAC | 1 cut(s) | 1087 |
| RseI | CAYNNNNRTG | 1 cut(s) | 289 |
| SalI | GTCGAC | 2 cut(s) | 32, 424 |
| SaqAI | TTAA | 3 cut(s) | 203, 888, 1064 |
| SatI | GCNGC | 2 cut(s) | 254, 263 |
| Sau3AI | GATC | 4 cut(s) | 247, 580, 996, 1229 |
| Sau96I | GGNCC | 5 cut(s) | 280, 281, 294, 310, 823 |
| SchI | GAGTC | 2 cut(s) | 461, 1133 |
| ScrFI | CCNGG | 4 cut(s) | 478, 512, 542, 855 |
| SduI | GDGCHC | 1 cut(s) | 284 |
| SfaNI | GCATC | 4 cut(s) | 544, 766, 895, 981 |
| SfcI | CTRYAG | 1 cut(s) | 10 |
| SgrAI | CRCCGGYG | 1 cut(s) | 288 |
| SgrDI | CGTCGACG | 1 cut(s) | 32 |
| SinI | GGWCC | 2 cut(s) | 310, 823 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 289 |
| SmlI | CTYRAG | 2 cut(s) | 887, 1063 |
| SmoI | CTYRAG | 2 cut(s) | 887, 1063 |
| SphI | GCATGC | 2 cut(s) | 947, 1182 |
| Sse9I | AATT | 5 cut(s) | 186, 549, 700, 802, 924 |
| SsiI | CCGC | 6 cut(s) | 191, 209, 253, 262, 345, 692 |
| SspMI | CTAG | 1 cut(s) | 1240 |
| StyD4I | CCNGG | 4 cut(s) | 476, 510, 540, 853 |
| TaaI | ACNGT | 2 cut(s) | 388, 655 |
| TaiI | ACGT | 4 cut(s) | 146, 246, 712, 1092 |
| TaqI | TCGA | 6 cut(s) | 33, 98, 107, 425, 633, 955 |
| TasI | AATT | 5 cut(s) | 186, 549, 700, 802, 924 |
| TauI | GCSGC | 2 cut(s) | 256, 265 |
| TfiI | GAWTC | 5 cut(s) | 60, 418, 505, 630, 721 |
| Tru1I | TTAA | 3 cut(s) | 203, 888, 1064 |
| Tru9I | TTAA | 3 cut(s) | 203, 888, 1064 |
| TscAI | CASTG | 1 cut(s) | 660 |
| TseFI | GTSAC | 1 cut(s) | 705 |
| Tsp45I | GTSAC | 1 cut(s) | 705 |
| TspDTI | ATGAA | 1 cut(s) | 485 |
| TspRI | CASTG | 1 cut(s) | 660 |
| Tth111I | GACNNNGTC | 1 cut(s) | 112 |
| Vha464I | CTTAAG | 2 cut(s) | 887, 1063 |
| VpaK11BI | GGWCC | 2 cut(s) | 310, 823 |
| XceI | RCATGY | 2 cut(s) | 947, 1182 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 787 |
| XmiI | GTMKAC | 2 cut(s) | 33, 425 |
| XspI | CTAG | 1 cut(s) | 1240 |
| Zsp2I | ATGCAT | 1 cut(s) | 1180 |