HhH-GPD superfamily base excision DNA repair protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 491 |
| AciI | CCGC | 1 cut(s) | 511 |
| AcsI | RAATTY | 1 cut(s) | 467 |
| AcuI | CTGAAG | 1 cut(s) | 336 |
| AcvI | CACGTG | 1 cut(s) | 41 |
| AgsI | TTSAA | 2 cut(s) | 298, 307 |
| AluBI | AGCT | 4 cut(s) | 260, 280, 320, 505 |
| AluI | AGCT | 4 cut(s) | 260, 280, 320, 505 |
| ApeKI | GCWGC | 2 cut(s) | 363, 547 |
| ApoI | RAATTY | 1 cut(s) | 467 |
| AsuC2I | CCSGG | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 20 |
| BbrPI | CACGTG | 1 cut(s) | 41 |
| BbsI | GAAGAC | 1 cut(s) | 202 |
| BbvI | GCAGC | 2 cut(s) | 375, 559 |
| BciVI | GTATCC | 1 cut(s) | 444 |
| BcnI | CCSGG | 1 cut(s) | 192 |
| BfuI | GTATCC | 1 cut(s) | 444 |
| BisI | GCNGC | 3 cut(s) | 364, 511, 548 |
| BlsI | GCNGC | 3 cut(s) | 365, 512, 549 |
| Bme1390I | CCNGG | 1 cut(s) | 192 |
| BmiI | GGNNCC | 1 cut(s) | 402 |
| BmrFI | CCNGG | 1 cut(s) | 192 |
| BmsI | GCATC | 2 cut(s) | 103, 528 |
| BpiI | GAAGAC | 1 cut(s) | 202 |
| BpmI | CTGGAG | 1 cut(s) | 372 |
| BpuEI | CTTGAG | 1 cut(s) | 209 |
| BpuMI | CCSGG | 1 cut(s) | 192 |
| BsaAI | YACGTR | 1 cut(s) | 41 |
| Bse1I | ACTGG | 3 cut(s) | 346, 404, 544 |
| BseGI | GGATG | 4 cut(s) | 52, 118, 166, 289 |
| BseNI | ACTGG | 3 cut(s) | 346, 404, 544 |
| BseXI | GCAGC | 2 cut(s) | 375, 559 |
| BsgI | GTGCAG | 1 cut(s) | 382 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| Bsp143I | GATC | 1 cut(s) | 472 |
| BspACI | CCGC | 1 cut(s) | 511 |
| BspHI | TCATGA | 1 cut(s) | 274 |
| BspLI | GGNNCC | 1 cut(s) | 402 |
| BsrI | ACTGG | 3 cut(s) | 346, 404, 544 |
| BssMI | GATC | 1 cut(s) | 472 |
| BssNAI | GTATAC | 1 cut(s) | 492 |
| Bst1107I | GTATAC | 1 cut(s) | 492 |
| BstBAI | YACGTR | 1 cut(s) | 41 |
| BstC8I | GCNNGC | 1 cut(s) | 188 |
| BstF5I | GGATG | 4 cut(s) | 52, 118, 166, 289 |
| BstKTI | GATC | 1 cut(s) | 475 |
| BstMBI | GATC | 1 cut(s) | 472 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 187, 257, 516 |
| BstSCI | CCNGG | 1 cut(s) | 190 |
| BstV1I | GCAGC | 2 cut(s) | 375, 559 |
| BstV2I | GAAGAC | 1 cut(s) | 202 |
| BstZ17I | GTATAC | 1 cut(s) | 492 |
| BsuI | GTATCC | 1 cut(s) | 444 |
| BtsCI | GGATG | 4 cut(s) | 52, 118, 166, 289 |
| BtsIMutI | CAGTG | 3 cut(s) | 181, 312, 537 |
| Cac8I | GCNNGC | 1 cut(s) | 188 |
| CciI | TCATGA | 1 cut(s) | 274 |
| CviAII | CATG | 2 cut(s) | 275, 497 |
| CviJI | RGCY | 8 cut(s) | 166, 260, 280, 320, 366, 389, 395, 505 |
| CviKI_1 | RGCY | 8 cut(s) | 166, 260, 280, 320, 366, 389, 395, 505 |
| DpnI | GATC | 1 cut(s) | 474 |
| DpnII | GATC | 1 cut(s) | 472 |
| Eco32I | GATATC | 1 cut(s) | 571 |
| Eco57I | CTGAAG | 1 cut(s) | 336 |
| Eco72I | CACGTG | 1 cut(s) | 41 |
| EcoRV | GATATC | 1 cut(s) | 571 |
| FaeI | CATG | 2 cut(s) | 278, 500 |
| FatI | CATG | 2 cut(s) | 274, 496 |
| FblI | GTMKAC | 1 cut(s) | 491 |
| Fnu4HI | GCNGC | 3 cut(s) | 364, 511, 548 |
| FokI | GGATG | 4 cut(s) | 59, 125, 173, 296 |
| Fsp4HI | GCNGC | 3 cut(s) | 364, 511, 548 |
| GluI | GCNGC | 3 cut(s) | 364, 511, 548 |
| GsuI | CTGGAG | 1 cut(s) | 372 |
| HapII | CCGG | 1 cut(s) | 191 |
| Hin1II | CATG | 2 cut(s) | 278, 500 |
| HindIII | AAGCTT | 1 cut(s) | 318 |
| HinfI | GANTC | 1 cut(s) | 52 |
| HpaII | CCGG | 1 cut(s) | 191 |
| HphI | GGTGA | 1 cut(s) | 20 |
| Hpy166II | GTNNAC | 1 cut(s) | 492 |
| Hpy188I | TCNGA | 1 cut(s) | 477 |
| Hpy188III | TCNNGA | 4 cut(s) | 56, 275, 351, 523 |
| Hpy8I | GTNNAC | 1 cut(s) | 492 |
| HpyAV | CCTTC | 3 cut(s) | 7, 82, 494 |
| HpyCH4IV | ACGT | 1 cut(s) | 40 |
| HpyCH4V | TGCA | 5 cut(s) | 292, 327, 363, 383, 519 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 187, 257, 516 |
| HpySE526I | ACGT | 1 cut(s) | 40 |
| Hsp92II | CATG | 2 cut(s) | 278, 500 |
| Kzo9I | GATC | 1 cut(s) | 472 |
| LmnI | GCTCC | 1 cut(s) | 410 |
| LpnPI | CCDG | 8 cut(s) | 204, 266, 327, 336, 403, 417, 468, 525 |
| Lsp1109I | GCAGC | 2 cut(s) | 375, 559 |
| LweI | GCATC | 2 cut(s) | 103, 528 |
| MaeII | ACGT | 1 cut(s) | 40 |
| MaeIII | GTNAC | 3 cut(s) | 36, 310, 337 |
| MalI | GATC | 1 cut(s) | 474 |
| MboI | GATC | 1 cut(s) | 472 |
| MboII | GAAGA | 5 cut(s) | 97, 202, 211, 310, 425 |
| MluCI | AATT | 6 cut(s) | 31, 267, 346, 467, 574, 592 |
| MmeI | TCCRAC | 1 cut(s) | 388 |
| MnlI | CCTC | 5 cut(s) | 19, 37, 347, 524, 559 |
| MseI | TTAA | 3 cut(s) | 108, 441, 465 |
| MspI | CCGG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 187, 257, 516 |
| NciI | CCSGG | 1 cut(s) | 192 |
| NdeII | GATC | 1 cut(s) | 472 |
| NlaIII | CATG | 2 cut(s) | 278, 500 |
| NlaIV | GGNNCC | 1 cut(s) | 402 |
| NmuCI | GTSAC | 2 cut(s) | 36, 310 |
| PagI | TCATGA | 1 cut(s) | 274 |
| PfeI | GAWTC | 1 cut(s) | 52 |
| PkrI | GCNGC | 3 cut(s) | 365, 512, 549 |
| PmaCI | CACGTG | 1 cut(s) | 41 |
| PmlI | CACGTG | 1 cut(s) | 41 |
| Ppu21I | YACGTR | 1 cut(s) | 41 |
| PspCI | CACGTG | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 1 cut(s) | 402 |
| SaqAI | TTAA | 3 cut(s) | 108, 441, 465 |
| SatI | GCNGC | 3 cut(s) | 364, 511, 548 |
| Sau3AI | GATC | 1 cut(s) | 472 |
| ScrFI | CCNGG | 1 cut(s) | 192 |
| SetI | ASST | 6 cut(s) | 43, 262, 282, 322, 507, 535 |
| SfaNI | GCATC | 2 cut(s) | 103, 528 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| Sse9I | AATT | 6 cut(s) | 31, 267, 346, 467, 574, 592 |
| SsiI | CCGC | 1 cut(s) | 511 |
| StyD4I | CCNGG | 1 cut(s) | 190 |
| TaiI | ACGT | 1 cut(s) | 43 |
| TasI | AATT | 6 cut(s) | 31, 267, 346, 467, 574, 592 |
| TauI | GCSGC | 1 cut(s) | 513 |
| TfiI | GAWTC | 1 cut(s) | 52 |
| Tru1I | TTAA | 3 cut(s) | 108, 441, 465 |
| Tru9I | TTAA | 3 cut(s) | 108, 441, 465 |
| TscAI | CASTG | 3 cut(s) | 181, 319, 544 |
| TseFI | GTSAC | 2 cut(s) | 36, 310 |
| TseI | GCWGC | 2 cut(s) | 363, 547 |
| Tsp45I | GTSAC | 2 cut(s) | 36, 310 |
| TspDTI | ATGAA | 4 cut(s) | 202, 425, 474, 574 |
| TspGWI | ACGGA | 1 cut(s) | 344 |
| TspRI | CASTG | 3 cut(s) | 181, 319, 544 |
| XapI | RAATTY | 1 cut(s) | 467 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 124 |
| XmiI | GTMKAC | 1 cut(s) | 491 |