HB1, ASXL, restriction endonuclease HTH domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 512 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 496 |
| AccI | GTMKAC | 1 cut(s) | 241 |
| AcoI | YGGCCR | 1 cut(s) | 595 |
| AcsI | RAATTY | 1 cut(s) | 307 |
| AcuI | CTGAAG | 2 cut(s) | 320, 498 |
| AcvI | CACGTG | 1 cut(s) | 41 |
| AfaI | GTAC | 1 cut(s) | 273 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 490, 496 |
| AgsI | TTSAA | 3 cut(s) | 307, 413, 540 |
| AjnI | CCWGG | 1 cut(s) | 489 |
| AluBI | AGCT | 4 cut(s) | 377, 407, 476, 623 |
| AluI | AGCT | 4 cut(s) | 377, 407, 476, 623 |
| Alw26I | GTCTC | 2 cut(s) | 542, 621 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 496 |
| AoxI | GGCC | 1 cut(s) | 595 |
| ApoI | RAATTY | 1 cut(s) | 307 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 408, 483 |
| AspS9I | GGNCC | 1 cut(s) | 423 |
| AsuC2I | CCSGG | 1 cut(s) | 192 |
| AsuHPI | GGTGA | 1 cut(s) | 20 |
| AvaII | GGWCC | 1 cut(s) | 423 |
| BalI | TGGCCA | 1 cut(s) | 597 |
| BanI | GGYRCC | 1 cut(s) | 512 |
| BbrPI | CACGTG | 1 cut(s) | 41 |
| BbsI | GAAGAC | 2 cut(s) | 202, 486 |
| BccI | CCATC | 1 cut(s) | 606 |
| BciT130I | CCWGG | 1 cut(s) | 491 |
| BclI | TGATCA | 1 cut(s) | 234 |
| BcnI | CCSGG | 1 cut(s) | 192 |
| BcoDI | GTCTC | 2 cut(s) | 542, 621 |
| BfaI | CTAG | 1 cut(s) | 245 |
| BfmI | CTRYAG | 1 cut(s) | 612 |
| BmcAI | AGTACT | 1 cut(s) | 273 |
| Bme1390I | CCNGG | 2 cut(s) | 192, 491 |
| Bme18I | GGWCC | 1 cut(s) | 423 |
| BmgT120I | GGNCC | 1 cut(s) | 423 |
| BmiI | GGNNCC | 1 cut(s) | 514 |
| BmrFI | CCNGG | 2 cut(s) | 192, 491 |
| BpiI | GAAGAC | 2 cut(s) | 202, 486 |
| BpmI | CTGGAG | 2 cut(s) | 473, 645 |
| BpuMI | CCSGG | 1 cut(s) | 192 |
| BsaAI | YACGTR | 2 cut(s) | 41, 326 |
| BsaWI | WCCGGW | 1 cut(s) | 255 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 250, 280, 325, 355 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 490, 496 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| Bse3DI | GCAATG | 1 cut(s) | 500 |
| BseBI | CCWGG | 1 cut(s) | 491 |
| BseGI | GGATG | 3 cut(s) | 52, 118, 166 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 490, 496 |
| BseMI | GCAATG | 1 cut(s) | 500 |
| BseMII | CTCAG | 2 cut(s) | 375, 645 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BshFI | GGCC | 1 cut(s) | 597 |
| BshNI | GGYRCC | 1 cut(s) | 512 |
| BsiSI | CCGG | 2 cut(s) | 191, 256 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 490, 496 |
| BsmAI | GTCTC | 2 cut(s) | 542, 621 |
| BsnI | GGCC | 1 cut(s) | 597 |
| Bsp143I | GATC | 1 cut(s) | 234 |
| BspANI | GGCC | 1 cut(s) | 597 |
| BspCNI | CTCAG | 2 cut(s) | 376, 644 |
| BspLI | GGNNCC | 1 cut(s) | 514 |
| BspQI | GCTCTTC | 1 cut(s) | 414 |
| BspT107I | GGYRCC | 1 cut(s) | 512 |
| BsrDI | GCAATG | 1 cut(s) | 500 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssMI | GATC | 1 cut(s) | 234 |
| BssNAI | GTATAC | 1 cut(s) | 242 |
| Bst1107I | GTATAC | 1 cut(s) | 242 |
| Bst2UI | CCWGG | 1 cut(s) | 491 |
| Bst4CI | ACNGT | 3 cut(s) | 437, 512, 556 |
| Bst6I | CTCTTC | 1 cut(s) | 414 |
| BstBAI | YACGTR | 2 cut(s) | 41, 326 |
| BstC8I | GCNNGC | 2 cut(s) | 188, 263 |
| BstDEI | CTNAG | 3 cut(s) | 384, 569, 631 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 488 |
| BstF5I | GGATG | 3 cut(s) | 52, 118, 166 |
| BstKTI | GATC | 1 cut(s) | 237 |
| BstMAI | GTCTC | 2 cut(s) | 542, 621 |
| BstMBI | GATC | 1 cut(s) | 234 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 367 |
| BstNI | CCWGG | 1 cut(s) | 491 |
| BstNSI | RCATGY | 2 cut(s) | 265, 611 |
| BstSCI | CCNGG | 2 cut(s) | 190, 489 |
| BstSFI | CTRYAG | 1 cut(s) | 612 |
| BstV2I | GAAGAC | 2 cut(s) | 202, 486 |
| BstZ17I | GTATAC | 1 cut(s) | 242 |
| BsuRI | GGCC | 1 cut(s) | 597 |
| BtsCI | GGATG | 3 cut(s) | 52, 118, 166 |
| Cac8I | GCNNGC | 2 cut(s) | 188, 263 |
| CaiI | CAGNNNCTG | 1 cut(s) | 496 |
| Cfr13I | GGNCC | 1 cut(s) | 423 |
| Csp6I | GTAC | 1 cut(s) | 272 |
| CviAII | CATG | 3 cut(s) | 262, 577, 608 |
| CviQI | GTAC | 1 cut(s) | 272 |
| DdeI | CTNAG | 3 cut(s) | 384, 569, 631 |
| DpnI | GATC | 1 cut(s) | 236 |
| DpnII | GATC | 1 cut(s) | 234 |
| EaeI | YGGCCR | 1 cut(s) | 595 |
| Eam1104I | CTCTTC | 1 cut(s) | 414 |
| EarI | CTCTTC | 1 cut(s) | 414 |
| Eco47I | GGWCC | 1 cut(s) | 423 |
| Eco57I | CTGAAG | 2 cut(s) | 320, 498 |
| Eco72I | CACGTG | 1 cut(s) | 41 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 488 |
| EcoRI | GAATTC | 1 cut(s) | 307 |
| EcoRII | CCWGG | 1 cut(s) | 489 |
| FaeI | CATG | 3 cut(s) | 265, 580, 611 |
| FaiI | YATR | 9 cut(s) | 78, 215, 242, 263, 518, 578, 590, 592, 609 |
| FatI | CATG | 3 cut(s) | 261, 576, 607 |
| FbaI | TGATCA | 1 cut(s) | 234 |
| FblI | GTMKAC | 1 cut(s) | 241 |
| FokI | GGATG | 3 cut(s) | 59, 125, 173 |
| FspBI | CTAG | 1 cut(s) | 245 |
| GsuI | CTGGAG | 2 cut(s) | 473, 645 |
| HaeIII | GGCC | 1 cut(s) | 597 |
| HapII | CCGG | 2 cut(s) | 191, 256 |
| Hin1II | CATG | 3 cut(s) | 265, 580, 611 |
| HincII | GTYRAC | 1 cut(s) | 280 |
| HindII | GTYRAC | 1 cut(s) | 280 |
| HinfI | GANTC | 3 cut(s) | 52, 629, 645 |
| HpaII | CCGG | 2 cut(s) | 191, 256 |
| HphI | GGTGA | 1 cut(s) | 20 |
| Hpy166II | GTNNAC | 3 cut(s) | 242, 280, 605 |
| Hpy188I | TCNGA | 3 cut(s) | 313, 634, 650 |
| Hpy188III | TCNNGA | 1 cut(s) | 56 |
| Hpy8I | GTNNAC | 3 cut(s) | 242, 280, 605 |
| HpyAV | CCTTC | 3 cut(s) | 7, 82, 494 |
| HpyCH4III | ACNGT | 3 cut(s) | 437, 512, 556 |
| HpyCH4IV | ACGT | 2 cut(s) | 40, 325 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 367 |
| HpyF3I | CTNAG | 3 cut(s) | 384, 569, 631 |
| HpySE526I | ACGT | 2 cut(s) | 40, 325 |
| Hsp92II | CATG | 3 cut(s) | 265, 580, 611 |
| Ksp22I | TGATCA | 1 cut(s) | 234 |
| Kzo9I | GATC | 1 cut(s) | 234 |
| LguI | GCTCTTC | 1 cut(s) | 414 |
| LmnI | GCTCC | 1 cut(s) | 258 |
| MaeI | CTAG | 1 cut(s) | 245 |
| MaeII | ACGT | 2 cut(s) | 40, 325 |
| MaeIII | GTNAC | 4 cut(s) | 36, 115, 223, 456 |
| MalI | GATC | 1 cut(s) | 236 |
| MboI | GATC | 1 cut(s) | 234 |
| MboII | GAAGA | 9 cut(s) | 97, 202, 211, 330, 401, 491, 528, 629, 647 |
| MlsI | TGGCCA | 1 cut(s) | 597 |
| MluCI | AATT | 3 cut(s) | 31, 307, 319 |
| MluNI | TGGCCA | 1 cut(s) | 597 |
| MlyI | GAGTC | 1 cut(s) | 623 |
| MnlI | CCTC | 6 cut(s) | 19, 37, 379, 426, 436, 475 |
| Mox20I | TGGCCA | 1 cut(s) | 597 |
| MroXI | GAANNNNTTC | 2 cut(s) | 408, 483 |
| MscI | TGGCCA | 1 cut(s) | 597 |
| MseI | TTAA | 4 cut(s) | 108, 252, 348, 432 |
| Msp20I | TGGCCA | 1 cut(s) | 597 |
| MspA1I | CMGCKG | 1 cut(s) | 476 |
| MspI | CCGG | 2 cut(s) | 191, 256 |
| MspR9I | CCNGG | 2 cut(s) | 192, 491 |
| MvaI | CCWGG | 1 cut(s) | 491 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 367 |
| NciI | CCSGG | 1 cut(s) | 192 |
| NdeII | GATC | 1 cut(s) | 234 |
| NlaIII | CATG | 3 cut(s) | 265, 580, 611 |
| NlaIV | GGNNCC | 1 cut(s) | 514 |
| NmuCI | GTSAC | 2 cut(s) | 36, 115 |
| NspI | RCATGY | 2 cut(s) | 265, 611 |
| PaeI | GCATGC | 1 cut(s) | 265 |
| PciSI | GCTCTTC | 1 cut(s) | 414 |
| PdmI | GAANNNNTTC | 2 cut(s) | 408, 483 |
| PfeI | GAWTC | 2 cut(s) | 52, 645 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 496 |
| PleI | GAGTC | 1 cut(s) | 623 |
| PmaCI | CACGTG | 1 cut(s) | 41 |
| PmlI | CACGTG | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 623 |
| Ppu21I | YACGTR | 2 cut(s) | 41, 326 |
| Psp6I | CCWGG | 1 cut(s) | 489 |
| PspCI | CACGTG | 1 cut(s) | 41 |
| PspGI | CCWGG | 1 cut(s) | 489 |
| PspN4I | GGNNCC | 1 cut(s) | 514 |
| PspPI | GGNCC | 1 cut(s) | 423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 496 |
| PvuII | CAGCTG | 1 cut(s) | 476 |
| RsaI | GTAC | 1 cut(s) | 273 |
| RsaNI | GTAC | 1 cut(s) | 272 |
| SapI | GCTCTTC | 1 cut(s) | 414 |
| SaqAI | TTAA | 4 cut(s) | 108, 252, 348, 432 |
| Sau3AI | GATC | 1 cut(s) | 234 |
| Sau96I | GGNCC | 1 cut(s) | 423 |
| ScaI | AGTACT | 1 cut(s) | 273 |
| SchI | GAGTC | 1 cut(s) | 623 |
| ScrFI | CCNGG | 2 cut(s) | 192, 491 |
| SfcI | CTRYAG | 1 cut(s) | 612 |
| SinI | GGWCC | 1 cut(s) | 423 |
| SphI | GCATGC | 1 cut(s) | 265 |
| Sse9I | AATT | 3 cut(s) | 31, 307, 319 |
| SspI | AATATT | 1 cut(s) | 530 |
| SspMI | CTAG | 1 cut(s) | 245 |
| StyD4I | CCNGG | 2 cut(s) | 190, 489 |
| TaaI | ACNGT | 3 cut(s) | 437, 512, 556 |
| TaiI | ACGT | 2 cut(s) | 43, 328 |
| TasI | AATT | 3 cut(s) | 31, 307, 319 |
| TatI | WGTACW | 1 cut(s) | 271 |
| TfiI | GAWTC | 2 cut(s) | 52, 645 |
| Tru1I | TTAA | 4 cut(s) | 108, 252, 348, 432 |
| Tru9I | TTAA | 4 cut(s) | 108, 252, 348, 432 |
| TseFI | GTSAC | 2 cut(s) | 36, 115 |
| Tsp45I | GTSAC | 2 cut(s) | 36, 115 |
| TspDTI | ATGAA | 1 cut(s) | 202 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 496 |
| VpaK11BI | GGWCC | 1 cut(s) | 423 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 488 |
| XapI | RAATTY | 1 cut(s) | 307 |
| XceI | RCATGY | 2 cut(s) | 265, 611 |
| XmiI | GTMKAC | 1 cut(s) | 241 |
| XmnI | GAANNNNTTC | 2 cut(s) | 408, 483 |
| XspI | CTAG | 1 cut(s) | 245 |
| ZrmI | AGTACT | 1 cut(s) | 273 |