Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000604

Physical Location & Seq

Genomic Coordinates Forward (+)

62779738 .. 62782494

Gene Structure 2757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG401300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGCTAACTACAGACGAGCCAAGCTCGCAATCGATGCCTTTCGCGGCTTCACATCAAGAATCGTAGCTAGACCAGAACCCATCTCCAGAGTCTACTCCACCAAGTCTTCAACTTTGGCCTCAAAACCAGCTAAGTTTTCTGGGTTTTCTCCTCCCTATTCTCTTTTACAGAACCCAGTTCAGCAAAACCAATTGAGCCCATTTCTCGGTTTTGCGAACAGATATTATCATGTGGATCGGCGGCAGGTGCAGCATTTCCGGAAAAGAGGTCCGCGCCGGTGGGCTGACTGGTTCAAGGACCCGAGGAGGGCGTTTGTTACTATCGTGGTGGGCGGTGGGGTTTTTATCACTGTGTATTTTGGGAACTTAGAGACTGTACCATACACCAAGCGTAGGCATTTTGTAATTCTGTCGACTAATTTGGAGAGGAAGCTGGGAGAGCAGCAGTTCGAGGAGTTGAAAGCCGGGTTTAAGGGGAAGATTTTGCCTCCTATACACCCGGAAAGTGTGAGGGTTAGGCTGATTTCCAAGGATATTATTGATGCGTTGAAGAGAGGGTTGAGGCATGATCAGGGGTGGACTGACATGGGGTATGCATCGGAGGAGGTTGACCCGAAATTCGAAGGCCGGGGGAGTGAGAGTGTGCAGGCATTGATGGAGGGGAAGGTGGAGGAGAATTGGTCACTTGAGGATGAGATTCTTGATGATAAGTGGATTGAGCATAGTAGGAAGAAGGGTAAGGATAGTGGTGTTAAGGATGCCACTTCGCATTTGGTTGATTTGAATTGGGAGGTTTTGGTGGTGGATCAGCCGATTGTCAATGCGTTTTGCTTGCCCGGTGGGAAGATAGTGGTCTTCACAGGGTTGCTTAAGCATTTTAGAAGTGATGCCGAGATAGCTACGATAATTGGTCATGAGGTTGGGCATGCTGTGGCTCGACACCCTGCAGAGGGCATCACAAAGAACCTGTGGGTTGCAATCCTGCAACTGCTTCTTTATCAGCTTATTTCGCCTGATTTTGTCAACCCATTATCCAATCTTTTCTTAAGGCTTCCTTTTTCCCGAAGGATGGAATTGGAAGCGGATCACATTGGGCTGCTGTTGATTGCTTCTGCTGGATATGATCCAAGAGTGGCTCCAACTGTGTACGAGAAGTTGGACAAACTCTCTGGTGGAGAATCTGCTTTGAGAGATTATCTTACCACTCATCCATCCGGGAAAAAGAGAGCTGAAATGCTGGCTCGAGCTAACATCATGGAAGAGGCACTAACTATATATCGCGACGTACGAGCAGGACGTGGGGTTGAAGGGTTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009987 GO:0016020 GO:0016043 GO:0016787 GO:0019538 GO:0019866 GO:0023052 GO:0030163 GO:0031090 GO:0031929 GO:0031966 GO:0031967 GO:0031975 GO:0035556 GO:0035694 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M48

Protein Analysis

439

Amino Acids

49.72

Weight (kDa)

9.47

Isoelectric Point (pI)

41.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M48	PF01435	260 - 414	1.1e-29	Peptidase family M48

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51740 AT5G51740 AT5G51740
fragaria_vesca	FvH4_7g28431 FvH4_7g28432
malus_domestica	MD01G1187900.v1.1 MD07G1015000.v1.1 MD07G1260500.v1.1
prunus_persica	Prupe.2G284300_v2.0.a1 Prupe.2G284400_v2.0.a1
pyrus_communis	pycom01g19990 pycom07g23380 pycom07g23540 pycom07g23740
rosa_chinensis	RchiOBHm_Chr1g0342951 RchiOBHm_Chr1g0375391 RchiOBHm_Chr1g0375401 RchiOBHm_Chr1g0375411 RchiOBHm_Chr2g0123811 RchiOBHm_Chr4g0391111 RchiOBHm_Chr4g0406741 RchiOBHm_Chr5g0031101 RchiOBHm_Chr7g0214411
rosa_laevigata	RLG00000004191 RLG00000019338 RLG00000026663 RLG00000026664
rosa_multiflora	Rmu_sc0000554.1_g000043 Rmu_sc0000554.1_g000047 Rmu_sc0001966.1_g000052 Rmu_sc0002169.1_g000012 Rmu_sc0006244.1_g000048 Rmu_sc0007176.1_g000002 Rmu_sc0014983.1_g000004 Rmu_sc0020175.1_g000003 Rmu_sc0021990.1_g000003 Rmu_ssc0000106.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029630 Rroxscaffold_1G00049160 Rroxscaffold_3G00235470 Rroxscaffold_3G00235480 Rroxscaffold_4G00282790 Rroxscaffold_4G00282800 Rroxscaffold_5G00357450 Rroxscaffold_5G00360550
rosa_rugosa	Rorug01G0390800 Rorug01G0390800 Rorug06G0413000
rosa_samantha	Rh1AG177000 Rh1AG401300 Rh1AG401400 Rh1BG362700 Rh1BG363000 Rh1BG363100 Rh1BG366200 Rh1CG376300 Rh1CG378900 Rh1DG069900 Rh1DG393500 Rh1DG393800 Rh1DG393900 Rh1DG396800 Rh2AG166900 Rh2DG172200 Rh2DG463600 Rh3CG274900 Rh4BG226700 Rh5AG215800 Rh5AG215900 Rh5BG215300 Rh5CG238800 Rh5DG219700 Rh5DG219800 Rh6BG136300 Rh6CG134700 Rh6DG121000 Rh7CG183600 Rh7DG190700
rosa_wichuraiana	Rw1G035620 Rw1G035630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	235
Acc36I	ACCTGC	1 cut(s)	235
AccI	GTMKAC	2 cut(s)	93, 413
AccII	CGCG	3 cut(s)	45, 274, 1281
AccIII	TCCGGA	1 cut(s)	258
AciI	CCGC	5 cut(s)	45, 241, 272, 333, 1082
AclWI	GGATC	4 cut(s)	243, 813, 1092, 1118
AcsI	RAATTY	1 cut(s)	617
AfaI	GTAC	3 cut(s)	378, 1148, 1287
AfiI	CCNNNNNNNGG	6 cut(s)	206, 307, 393, 949, 950, 1069
AflII	CTTAAG	2 cut(s)	869, 1045
AgsI	TTSAA	6 cut(s)	111, 295, 460, 550, 784, 1307
AjiI	CACGTC	1 cut(s)	1298
AluBI	AGCT	8 cut(s)	25, 68, 131, 433, 899, 1003, 1229, 1247
AluI	AGCT	8 cut(s)	25, 68, 131, 433, 899, 1003, 1229, 1247
Alw26I	GTCTC	1 cut(s)	365
AlwI	GGATC	4 cut(s)	243, 813, 1092, 1118
Ama87I	CYCGRG	2 cut(s)	301, 1242
Aor13HI	TCCGGA	1 cut(s)	258
AoxI	GGCC	2 cut(s)	117, 625
ApeKI	GCWGC	3 cut(s)	250, 442, 1096
ApoI	RAATTY	1 cut(s)	617
ArsI	GACNNNNNNTTYG	2 cut(s)	602, 634
Asp700I	GAANNNNTTC	1 cut(s)	1311
AspLEI	GCGC	1 cut(s)	276
AspS9I	GGNCC	2 cut(s)	269, 298
AsuC2I	CCSGG	5 cut(s)	466, 500, 629, 837, 1216
AsuII	TTCGAA	1 cut(s)	621
AvaI	CYCGRG	2 cut(s)	301, 1242
AvaII	GGWCC	2 cut(s)	269, 298
BanII	GRGCYC	1 cut(s)	200
BbsI	GAAGAC	2 cut(s)	99, 847
BbvI	GCAGC	3 cut(s)	262, 454, 1083
BccI	CCATC	4 cut(s)	89, 649, 1063, 1219
BclI	TGATCA	1 cut(s)	568
BcnI	CCSGG	5 cut(s)	466, 500, 629, 837, 1216
BcoDI	GTCTC	1 cut(s)	365
BfaI	CTAG	1 cut(s)	69
BfmI	CTRYAG	2 cut(s)	10, 945
BfrI	CTTAAG	2 cut(s)	869, 1045
BfuAI	ACCTGC	1 cut(s)	235
BisI	GCNGC	5 cut(s)	46, 242, 251, 443, 1097
BlsI	GCNGC	5 cut(s)	47, 243, 252, 444, 1098
Bme1390I	CCNGG	5 cut(s)	466, 500, 629, 837, 1216
Bme18I	GGWCC	2 cut(s)	269, 298
BmeT110I	CYCGRG	2 cut(s)	301, 1242
BmgBI	CACGTC	1 cut(s)	1298
BmgT120I	GGNCC	2 cut(s)	269, 298
BmiI	GGNNCC	2 cut(s)	300, 1137
BmrFI	CCNGG	5 cut(s)	466, 500, 629, 837, 1216
BmrI	ACTGGG	1 cut(s)	170
BmsI	GCATC	6 cut(s)	25, 532, 605, 748, 877, 963
BmuI	ACTGGG	1 cut(s)	170
BpiI	GAAGAC	2 cut(s)	99, 847
BplI	GAGNNNNNCTC	2 cut(s)	9, 41
BpmI	CTGGAG	1 cut(s)	70
Bpu14I	TTCGAA	1 cut(s)	621
BpuEI	CTTGAG	1 cut(s)	707
BpuMI	CCSGG	5 cut(s)	466, 500, 629, 837, 1216
Bsa29I	ATCGAT	1 cut(s)	33
BsaJI	CCNNGG	3 cut(s)	302, 528, 628
BsaWI	WCCGGW	1 cut(s)	258
BsaXI	ACNNNNNCTCC	4 cut(s)	625, 655, 665, 695
Bsc4I	CCNNNNNNNGG	6 cut(s)	206, 307, 393, 949, 950, 1069
Bse118I	RCCGGY	1 cut(s)	276
Bse1I	ACTGG	2 cut(s)	176, 293
BseAI	TCCGGA	1 cut(s)	258
BseCI	ATCGAT	1 cut(s)	33
BseDI	CCNNGG	3 cut(s)	302, 528, 628
BseGI	GGATG	5 cut(s)	697, 763, 1074, 1207, 1211
BseLI	CCNNNNNNNGG	6 cut(s)	206, 307, 393, 949, 950, 1069
BseNI	ACTGG	2 cut(s)	176, 293
BseRI	GAGGAG	5 cut(s)	141, 319, 467, 617, 686
BseXI	GCAGC	3 cut(s)	262, 454, 1083
BseYI	CCCAGC	1 cut(s)	433
BsgI	GTGCAG	2 cut(s)	269, 665
Bsh1236I	CGCG	3 cut(s)	45, 274, 1281
BshFI	GGCC	2 cut(s)	119, 627
BshVI	ATCGAT	1 cut(s)	33
BsiHKCI	CYCGRG	2 cut(s)	301, 1242
BsiSI	CCGG	7 cut(s)	259, 277, 465, 500, 628, 837, 1215
BsiWI	CGTACG	1 cut(s)	1285
BslI	CCNNNNNNNGG	6 cut(s)	206, 307, 393, 949, 950, 1069
BsmAI	GTCTC	1 cut(s)	365
BsnI	GGCC	2 cut(s)	119, 627
BsoBI	CYCGRG	2 cut(s)	301, 1242
Bsp119I	TTCGAA	1 cut(s)	621
Bsp1286I	GDGCHC	1 cut(s)	200
Bsp13I	TCCGGA	1 cut(s)	258
Bsp143I	GATC	5 cut(s)	235, 568, 805, 1084, 1123
Bsp68I	TCGCGA	1 cut(s)	1281
BspACI	CCGC	5 cut(s)	45, 241, 272, 333, 1082
BspANI	GGCC	2 cut(s)	119, 627
BspDI	ATCGAT	1 cut(s)	33
BspEI	TCCGGA	1 cut(s)	258
BspFNI	CGCG	3 cut(s)	45, 274, 1281
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	2 cut(s)	300, 1137
BspMAI	CTGCAG	1 cut(s)	949
BspMI	ACCTGC	1 cut(s)	235
BspPI	GGATC	4 cut(s)	243, 813, 1092, 1118
BspT104I	TTCGAA	1 cut(s)	621
BspTI	CTTAAG	2 cut(s)	869, 1045
BsrFI	RCCGGY	1 cut(s)	276
BsrI	ACTGG	2 cut(s)	176, 293
BssAI	RCCGGY	1 cut(s)	276
BssECI	CCNNGG	3 cut(s)	302, 528, 628
BssMI	GATC	5 cut(s)	235, 568, 805, 1084, 1123
BssT1I	CCWWGG	1 cut(s)	528
Bst4CI	ACNGT	3 cut(s)	352, 376, 1144
Bst6I	CTCTTC	2 cut(s)	545, 1254
BstAFI	CTTAAG	2 cut(s)	869, 1045
BstAPI	GCANNNNNTGC	1 cut(s)	35
BstBI	TTCGAA	1 cut(s)	621
BstC8I	GCNNGC	5 cut(s)	27, 648, 833, 927, 1239
BstDEI	CTNAG	2 cut(s)	132, 367
BstF5I	GGATG	5 cut(s)	697, 763, 1074, 1207, 1211
BstFNI	CGCG	3 cut(s)	45, 274, 1281
BstHHI	GCGC	1 cut(s)	276
BstKTI	GATC	5 cut(s)	238, 571, 808, 1087, 1126
BstMAI	GTCTC	1 cut(s)	365
BstMBI	GATC	5 cut(s)	235, 568, 805, 1084, 1123
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 35, 247, 250, 439, 896, 1009
BstNSI	RCATGY	1 cut(s)	929
BstSCI	CCNGG	5 cut(s)	464, 498, 627, 835, 1214
BstSFI	CTRYAG	2 cut(s)	10, 945
BstUI	CGCG	3 cut(s)	45, 274, 1281
BstV1I	GCAGC	3 cut(s)	262, 454, 1083
BstV2I	GAAGAC	2 cut(s)	99, 847
Bsu15I	ATCGAT	1 cut(s)	33
BsuRI	GGCC	2 cut(s)	119, 627
BsuTUI	ATCGAT	1 cut(s)	33
BtrI	CACGTC	1 cut(s)	1298
BtsCI	GGATG	5 cut(s)	697, 763, 1074, 1207, 1211
BtsIMutI	CAGTG	1 cut(s)	348
BtuMI	TCGCGA	1 cut(s)	1281
BveI	ACCTGC	1 cut(s)	235
Cac8I	GCNNGC	5 cut(s)	27, 648, 833, 927, 1239
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	1 cut(s)	276
Cfr10I	RCCGGY	1 cut(s)	276
Cfr13I	GGNCC	2 cut(s)	269, 298
ClaI	ATCGAT	1 cut(s)	33
Csp6I	GTAC	3 cut(s)	377, 1147, 1286
CviAII	CATG	6 cut(s)	230, 566, 586, 914, 926, 1255
CviQI	GTAC	3 cut(s)	377, 1147, 1286
DdeI	CTNAG	2 cut(s)	132, 367
DpnI	GATC	5 cut(s)	237, 570, 807, 1086, 1125
DpnII	GATC	5 cut(s)	235, 568, 805, 1084, 1123
Eam1104I	CTCTTC	2 cut(s)	545, 1254
EarI	CTCTTC	2 cut(s)	545, 1254
Eco130I	CCWWGG	1 cut(s)	528
Eco24I	GRGCYC	1 cut(s)	200
Eco47I	GGWCC	2 cut(s)	269, 298
Eco88I	CYCGRG	2 cut(s)	301, 1242
EcoO109I	RGGNCCY	1 cut(s)	298
EcoT14I	CCWWGG	1 cut(s)	528
EcoT22I	ATGCAT	1 cut(s)	598
EcoT38I	GRGCYC	1 cut(s)	200
ErhI	CCWWGG	1 cut(s)	528
FaeI	CATG	6 cut(s)	233, 569, 589, 917, 929, 1258
FalI	AAGNNNNNCTT	3 cut(s)	1039, 1071, 1299
FatI	CATG	6 cut(s)	229, 565, 585, 913, 925, 1254
FbaI	TGATCA	1 cut(s)	568
FblI	GTMKAC	2 cut(s)	93, 413
Fnu4HI	GCNGC	5 cut(s)	46, 242, 251, 443, 1097
FokI	GGATG	5 cut(s)	704, 770, 1081, 1194, 1198
FriOI	GRGCYC	1 cut(s)	200
Fsp4HI	GCNGC	5 cut(s)	46, 242, 251, 443, 1097
FspBI	CTAG	1 cut(s)	69
GlaI	GCGC	1 cut(s)	275
GluI	GCNGC	5 cut(s)	46, 242, 251, 443, 1097
GsaI	CCCAGC	1 cut(s)	437
GsuI	CTGGAG	1 cut(s)	70
HaeIII	GGCC	2 cut(s)	119, 627
HapII	CCGG	7 cut(s)	259, 277, 465, 500, 628, 837, 1215
HhaI	GCGC	1 cut(s)	276
Hin1II	CATG	6 cut(s)	233, 569, 589, 917, 929, 1258
Hin6I	GCGC	1 cut(s)	274
HinP1I	GCGC	1 cut(s)	274
HincII	GTYRAC	3 cut(s)	414, 610, 1024
HindII	GTYRAC	3 cut(s)	414, 610, 1024
HinfI	GANTC	4 cut(s)	60, 90, 697, 1178
HpaII	CCGG	7 cut(s)	259, 277, 465, 500, 628, 837, 1215
Hpy166II	GTNNAC	6 cut(s)	94, 414, 579, 610, 1024, 1147
Hpy188I	TCNGA	1 cut(s)	601
Hpy188III	TCNNGA	7 cut(s)	57, 87, 259, 701, 914, 1062, 1280
Hpy8I	GTNNAC	6 cut(s)	94, 414, 579, 610, 1024, 1147
Hpy99I	CGWCG	1 cut(s)	1286
HpyAV	CCTTC	5 cut(s)	617, 658, 727, 1059, 1301
HpyCH4III	ACNGT	3 cut(s)	352, 376, 1144
HpyCH4IV	ACGT	2 cut(s)	1284, 1297
HpyCH4V	TGCA	6 cut(s)	250, 596, 646, 947, 977, 985
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 35, 247, 250, 439, 896, 1009
HpyF3I	CTNAG	2 cut(s)	132, 367
HpySE526I	ACGT	2 cut(s)	1284, 1297
Hsp92II	CATG	6 cut(s)	233, 569, 589, 917, 929, 1258
HspAI	GCGC	1 cut(s)	274
Kpn2I	TCCGGA	1 cut(s)	258
Ksp22I	TGATCA	1 cut(s)	568
Kzo9I	GATC	5 cut(s)	235, 568, 805, 1084, 1123
LmnI	GCTCC	1 cut(s)	1141
Lsp1109I	GCAGC	3 cut(s)	262, 454, 1083
LweI	GCATC	6 cut(s)	25, 532, 605, 748, 877, 963
MaeI	CTAG	1 cut(s)	69
MaeII	ACGT	2 cut(s)	1284, 1297
MaeIII	GTNAC	2 cut(s)	316, 681
MalI	GATC	5 cut(s)	237, 570, 807, 1086, 1125
MboI	GATC	5 cut(s)	235, 568, 805, 1084, 1123
MboII	GAAGA	7 cut(s)	99, 490, 562, 742, 847, 856, 1271
MfeI	CAATTG	1 cut(s)	191
MhlI	GDGCHC	1 cut(s)	200
MluCI	AATT	8 cut(s)	191, 405, 418, 617, 676, 784, 906, 1073
MlyI	GAGTC	1 cut(s)	99
MmeI	TCCRAC	2 cut(s)	1137, 1163
Mph1103I	ATGCAT	1 cut(s)	598
MroI	TCCGGA	1 cut(s)	258
MroXI	GAANNNNTTC	1 cut(s)	1311
MseI	TTAA	4 cut(s)	471, 753, 870, 1046
MspCI	CTTAAG	2 cut(s)	869, 1045
MspI	CCGG	7 cut(s)	259, 277, 465, 500, 628, 837, 1215
MspR9I	CCNGG	5 cut(s)	466, 500, 629, 837, 1216
MunI	CAATTG	1 cut(s)	191
MvnI	CGCG	3 cut(s)	45, 274, 1281
MwoI	GCNNNNNNNGC	7 cut(s)	26, 35, 247, 250, 439, 896, 1009
NciI	CCSGG	5 cut(s)	466, 500, 629, 837, 1216
NdeII	GATC	5 cut(s)	235, 568, 805, 1084, 1123
NlaIII	CATG	6 cut(s)	233, 569, 589, 917, 929, 1258
NlaIV	GGNNCC	2 cut(s)	300, 1137
NmeAIII	GCCGAG	1 cut(s)	916
NmuCI	GTSAC	1 cut(s)	681
NruI	TCGCGA	1 cut(s)	1281
NsiI	ATGCAT	1 cut(s)	598
NspI	RCATGY	1 cut(s)	929
NspV	TTCGAA	1 cut(s)	621
PaeI	GCATGC	1 cut(s)	929
PaeR7I	CTCGAG	1 cut(s)	1242
PagI	TCATGA	1 cut(s)	913
PaqCI	CACCTGC	1 cut(s)	235
PcsI	WCGNNNNNNNCGW	2 cut(s)	1285, 1294
PdmI	GAANNNNTTC	1 cut(s)	1311
PfeI	GAWTC	3 cut(s)	60, 697, 1178
Pfl23II	CGTACG	1 cut(s)	1285
PfoI	TCCNGGA	1 cut(s)	1214
PkrI	GCNGC	5 cut(s)	47, 243, 252, 444, 1098
PleI	GAGTC	1 cut(s)	98
PpsI	GAGTC	1 cut(s)	98
PpuMI	RGGWCCY	1 cut(s)	298
Psp5II	RGGWCCY	1 cut(s)	298
PspFI	CCCAGC	1 cut(s)	433
PspLI	CGTACG	1 cut(s)	1285
PspN4I	GGNNCC	2 cut(s)	300, 1137
PspPI	GGNCC	2 cut(s)	269, 298
PspPPI	RGGWCCY	1 cut(s)	298
PspXI	VCTCGAGB	1 cut(s)	1242
PstI	CTGCAG	1 cut(s)	949
RruI	TCGCGA	1 cut(s)	1281
RsaI	GTAC	3 cut(s)	378, 1148, 1287
RsaNI	GTAC	3 cut(s)	377, 1147, 1286
SalI	GTCGAC	1 cut(s)	412
SaqAI	TTAA	4 cut(s)	471, 753, 870, 1046
SatI	GCNGC	5 cut(s)	46, 242, 251, 443, 1097
Sau3AI	GATC	5 cut(s)	235, 568, 805, 1084, 1123
Sau96I	GGNCC	2 cut(s)	269, 298
SchI	GAGTC	1 cut(s)	99
ScrFI	CCNGG	5 cut(s)	466, 500, 629, 837, 1216
SduI	GDGCHC	1 cut(s)	200
SfaNI	GCATC	6 cut(s)	25, 532, 605, 748, 877, 963
SfcI	CTRYAG	2 cut(s)	10, 945
Sfr274I	CTCGAG	1 cut(s)	1242
SfuI	TTCGAA	1 cut(s)	621
SgrAI	CRCCGGYG	1 cut(s)	276
SinI	GGWCC	2 cut(s)	269, 298
SlaI	CTCGAG	1 cut(s)	1242
SmlI	CTYRAG	4 cut(s)	686, 869, 1045, 1242
SmoI	CTYRAG	4 cut(s)	686, 869, 1045, 1242
SphI	GCATGC	1 cut(s)	929
Sse9I	AATT	8 cut(s)	191, 405, 418, 617, 676, 784, 906, 1073
SsiI	CCGC	5 cut(s)	45, 241, 272, 333, 1082
SspMI	CTAG	1 cut(s)	69
StyD4I	CCNGG	5 cut(s)	464, 498, 627, 835, 1214
StyI	CCWWGG	1 cut(s)	528
TaaI	ACNGT	3 cut(s)	352, 376, 1144
TaiI	ACGT	2 cut(s)	1287, 1300
TaqI	TCGA	6 cut(s)	33, 413, 450, 621, 937, 1243
TasI	AATT	8 cut(s)	191, 405, 418, 617, 676, 784, 906, 1073
TauI	GCSGC	2 cut(s)	48, 244
TfiI	GAWTC	3 cut(s)	60, 697, 1178
Tru1I	TTAA	4 cut(s)	471, 753, 870, 1046
Tru9I	TTAA	4 cut(s)	471, 753, 870, 1046
TscAI	CASTG	1 cut(s)	355
TseFI	GTSAC	1 cut(s)	681
TseI	GCWGC	3 cut(s)	250, 442, 1096
Tsp45I	GTSAC	1 cut(s)	681
TspRI	CASTG	1 cut(s)	355
Vha464I	CTTAAG	2 cut(s)	869, 1045
VpaK11BI	GGWCC	2 cut(s)	269, 298
XapI	RAATTY	1 cut(s)	617
XceI	RCATGY	1 cut(s)	929
XcmI	CCANNNNNNNNNTGG	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	1242
XmiI	GTMKAC	2 cut(s)	93, 413
XmnI	GAANNNNTTC	1 cut(s)	1311
XspI	CTAG	1 cut(s)	69
Zsp2I	ATGCAT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.