Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0000604

Physical Location & Seq

Genomic Coordinates Forward (+)

18461310 .. 18463864

Gene Structure 2555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g19990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGATCGATCGTACAGGAGAGCAAAGCTCGCAGTCGACGCCTTCCGCGGCTTCACGGCGAGGATTGCCCCCAAAGCCGCCGCCAGAGAGCCCATCTCTCGCGTTTTCTCAACTGGGTCTTCCGCTTCCGTCTCCAACTCAGCTAAGTTTTCTGGGTTTTCTTCCAATTCTTCAATTTTACACAAATCAATTCCGCAACTTGGTAGAATCACAAGAACAACACAGTACAAAAACCCTTTTCTTGATTGCACTAAGAGATATTACTATGTCGACCGGAAGCGGGTTCACCACTTCAAGCCGAGAGGCCCCCGGAGGTGGTTTGAGAGTCCCAGGAACGTTTTGATTGTGGGTCTGGTGGGTTCTGGGATTTTTATCACCGTGTATTTTGGGAATTTGGAGACGATTCCGTACACGAAGCGAACCCATTTTATAATTTTGTCGAAAGCCTTGGAGAAGAGGTTGGGGGAGTCCCAATTCCAGCAAATGAAAGAGAGTTTCAAAGGGGACATTTTGCCCGCCATACATCCGGATAGCGTGCGGGTTCGGTTGATTGCCAAGGATATAATAGAGGCTTTGCAGAGAGGGTTGAGCCATGACGTGACCTGGACTGACGTGGACTATGCGTCCGGTAAAGTGGAGCTGGCACATGAGAGTGGTGGCAAGGACACTTTGATGGCACTGCAGGATCCTCCGGAGGATGGGAAGTGGTCCCGTGAGGATGAGATTCTTGATGATCGATGGATTGAGAAGAGTAGGAAGACAAGTAGGGAGAGAGGTTTGAAAGCTGCCACTTCGCATTTGGATCATTTGAATTGGGAGGTTTTGGTGGTGGATAAGCCCATTGTCAATGCATTTTGCTTGCCGGGTGGGAAGATTGTCGTCTTCACGGGGTTGCTCAAGCATTTTACAAGTGATGCCGAGATAGCGACGATCATTGGTCACGAGGTTGGCCATGCTGTGGCTCGACATTCTGCAGAGACTATTACAAAGAACCTGTGGTTTGCAATCCTGCAACTGGTGCTTTATCAATTTGTTACGCCTGATGTTGTCAACACAATGTCCAATCTTTTCTTGAGGCTTCCTTTCTCCCGAAGGATGGAAATTGAAGCGGATCACATTGGGCTTCTGTTGATTGCTTCTGCTGGATATGATCCCAGAGTGGCTCCAACTGTGTACGAGAAGTTGAGCAAGGTTACTGGTGGTGAATCTGCACTCAGAGATTATCTTTCAACCCATCCATCCGGGAAAAAGAGAGCTGAATTGCTGGCTCAAGCTAAGATCATGGAAGAAGCACTCGCTATATACAGGGATGCAGGAGCAGGACGTGGGGTTGAAGGCTTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006508 GO:0006515 GO:0006807 GO:0006996 GO:0007005 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009987 GO:0016020 GO:0016043 GO:0016787 GO:0019538 GO:0019866 GO:0023052 GO:0030163 GO:0031090 GO:0031929 GO:0031966 GO:0031967 GO:0031975 GO:0035556 GO:0035694 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M48

Protein Analysis

449

Amino Acids

50.22

Weight (kDa)

9.57

Isoelectric Point (pI)

37.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M48	PF01435	262 - 423	2.3e-31	Peptidase family M48

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51740 AT5G51740 AT5G51740
fragaria_vesca	FvH4_7g28431 FvH4_7g28432
malus_domestica	MD01G1187900.v1.1 MD07G1015000.v1.1 MD07G1260500.v1.1
prunus_persica	Prupe.2G284300_v2.0.a1 Prupe.2G284400_v2.0.a1
pyrus_communis	pycom01g19990 pycom07g23380 pycom07g23540 pycom07g23740
rosa_chinensis	RchiOBHm_Chr1g0342951 RchiOBHm_Chr1g0375391 RchiOBHm_Chr1g0375401 RchiOBHm_Chr1g0375411 RchiOBHm_Chr2g0123811 RchiOBHm_Chr4g0391111 RchiOBHm_Chr4g0406741 RchiOBHm_Chr5g0031101 RchiOBHm_Chr7g0214411
rosa_laevigata	RLG00000004191 RLG00000019338 RLG00000026663 RLG00000026664
rosa_multiflora	Rmu_sc0000554.1_g000043 Rmu_sc0000554.1_g000047 Rmu_sc0001966.1_g000052 Rmu_sc0002169.1_g000012 Rmu_sc0006244.1_g000048 Rmu_sc0007176.1_g000002 Rmu_sc0014983.1_g000004 Rmu_sc0020175.1_g000003 Rmu_sc0021990.1_g000003 Rmu_ssc0000106.1_g000001
rosa_roxburghii	Rroxscaffold_1G00029630 Rroxscaffold_1G00049160 Rroxscaffold_3G00235470 Rroxscaffold_3G00235480 Rroxscaffold_4G00282790 Rroxscaffold_4G00282800 Rroxscaffold_5G00357450 Rroxscaffold_5G00360550
rosa_rugosa	Rorug01G0390800 Rorug01G0390800 Rorug06G0413000
rosa_samantha	Rh1AG177000 Rh1AG401300 Rh1AG401400 Rh1BG362700 Rh1BG363000 Rh1BG363100 Rh1BG366200 Rh1CG376300 Rh1CG378900 Rh1DG069900 Rh1DG393500 Rh1DG393800 Rh1DG393900 Rh1DG396800 Rh2AG166900 Rh2DG172200 Rh2DG463600 Rh3CG274900 Rh4BG226700 Rh5AG215800 Rh5AG215900 Rh5BG215300 Rh5CG238800 Rh5DG219700 Rh5DG219800 Rh6BG136300 Rh6CG134700 Rh6DG121000 Rh7CG183600 Rh7DG190700
rosa_wichuraiana	Rw1G035620 Rw1G035630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	431
AccB7I	CCANNNNNTGG	1 cut(s)	958
AccI	GTMKAC	2 cut(s)	36, 270
AccII	CGCG	2 cut(s)	48, 102
AccIII	TCCGGA	2 cut(s)	526, 691
AclI	AACGTT	1 cut(s)	336
AclWI	GGATC	6 cut(s)	12, 680, 693, 810, 1119, 1145
AcoI	YGGCCR	1 cut(s)	949
AcsI	RAATTY	1 cut(s)	391
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	4 cut(s)	14, 227, 410, 1175
AfiI	CCNNNNNNNGG	7 cut(s)	200, 280, 315, 698, 958, 1015, 1096
AgsI	TTSAA	8 cut(s)	174, 295, 499, 781, 811, 1106, 1230, 1334
AhdI	GACNNNNNGTC	1 cut(s)	622
AjiI	CACGTC	3 cut(s)	598, 613, 1325
AjnI	CCWGG	2 cut(s)	329, 602
AluBI	AGCT	6 cut(s)	28, 143, 640, 785, 1256, 1274
AluI	AGCT	6 cut(s)	28, 143, 640, 785, 1256, 1274
Alw26I	GTCTC	3 cut(s)	136, 392, 971
AlwI	GGATC	6 cut(s)	12, 680, 693, 810, 1119, 1145
Aor13HI	TCCGGA	2 cut(s)	526, 691
AoxI	GGCC	2 cut(s)	304, 949
ApeKI	GCWGC	1 cut(s)	785
ApoI	RAATTY	1 cut(s)	391
Asp700I	GAANNNNTTC	1 cut(s)	1338
AspS9I	GGNCC	2 cut(s)	305, 708
AsuC2I	CCSGG	3 cut(s)	310, 864, 1243
AsuHPI	GGTGA	3 cut(s)	278, 367, 1214
AvaII	GGWCC	1 cut(s)	708
BalI	TGGCCA	1 cut(s)	951
BamHI	GGATCC	1 cut(s)	685
BanII	GRGCYC	1 cut(s)	93
BauI	CACGAG	1 cut(s)	941
BbsI	GAAGAC	3 cut(s)	111, 764, 874
BbvI	GCAGC	1 cut(s)	772
BccI	CCATC	7 cut(s)	101, 667, 692, 732, 1090, 1242, 1246
BceAI	ACGGC	1 cut(s)	72
BciT130I	CCWGG	2 cut(s)	331, 604
BcnI	CCSGG	3 cut(s)	310, 864, 1243
BcoDI	GTCTC	3 cut(s)	136, 392, 971
BfmI	CTRYAG	2 cut(s)	680, 972
BisI	GCNGC	4 cut(s)	49, 78, 81, 786
BlsI	GCNGC	4 cut(s)	50, 79, 82, 787
Bme1390I	CCNGG	5 cut(s)	310, 331, 604, 864, 1243
Bme18I	GGWCC	1 cut(s)	708
BmeRI	GACNNNNNGTC	1 cut(s)	622
BmgBI	CACGTC	3 cut(s)	598, 613, 1325
BmgT120I	GGNCC	2 cut(s)	305, 708
BmiI	GGNNCC	4 cut(s)	307, 687, 710, 1164
BmrFI	CCNGG	5 cut(s)	310, 331, 604, 864, 1243
BmrI	ACTGGG	1 cut(s)	123
BmsI	GCATC	2 cut(s)	904, 1300
BmuI	ACTGGG	1 cut(s)	123
BpiI	GAAGAC	3 cut(s)	111, 764, 874
BplI	GAGNNNNNCTC	4 cut(s)	12, 44, 80, 112
BpuEI	CTTGAG	3 cut(s)	881, 1093, 1254
BpuMI	CCSGG	3 cut(s)	310, 864, 1243
Bsa29I	ATCGAT	2 cut(s)	7, 736
BsaBI	GATNNNNATC	1 cut(s)	371
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	5 cut(s)	46, 308, 329, 447, 555
BsaWI	WCCGGW	4 cut(s)	273, 526, 626, 691
BsaXI	ACNNNNNCTCC	2 cut(s)	443, 473
Bsc4I	CCNNNNNNNGG	7 cut(s)	200, 280, 315, 698, 958, 1015, 1096
Bse1I	ACTGG	3 cut(s)	118, 1020, 1201
Bse8I	GATNNNNATC	1 cut(s)	371
BseAI	TCCGGA	2 cut(s)	526, 691
BseBI	CCWGG	2 cut(s)	331, 604
BseCI	ATCGAT	2 cut(s)	7, 736
BseDI	CCNNGG	5 cut(s)	46, 308, 329, 447, 555
BseGI	GGATG	7 cut(s)	523, 703, 724, 1101, 1234, 1238, 1315
BseJI	GATNNNNATC	1 cut(s)	371
BseLI	CCNNNNNNNGG	7 cut(s)	200, 280, 315, 698, 958, 1015, 1096
BseMII	CTCAG	2 cut(s)	153, 1228
BseNI	ACTGG	3 cut(s)	118, 1020, 1201
BseXI	GCAGC	1 cut(s)	772
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	2 cut(s)	48, 102
Bsh1285I	CGRYCG	2 cut(s)	11, 274
BshFI	GGCC	2 cut(s)	306, 951
BshVI	ATCGAT	2 cut(s)	7, 736
BsiEI	CGRYCG	2 cut(s)	11, 274
BsiSI	CCGG	7 cut(s)	274, 310, 527, 627, 692, 863, 1242
BslFI	GGGAC	4 cut(s)	312, 454, 518, 694
BslI	CCNNNNNNNGG	7 cut(s)	200, 280, 315, 698, 958, 1015, 1096
BsmAI	GTCTC	3 cut(s)	136, 392, 971
BsmBI	CGTCTC	2 cut(s)	136, 392
BsmFI	GGGAC	4 cut(s)	312, 454, 518, 694
BsnI	GGCC	2 cut(s)	306, 951
Bsp1286I	GDGCHC	1 cut(s)	93
Bsp13I	TCCGGA	2 cut(s)	526, 691
Bsp143I	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
BspANI	GGCC	2 cut(s)	306, 951
BspCNI	CTCAG	2 cut(s)	152, 1227
BspDI	ATCGAT	2 cut(s)	7, 736
BspEI	TCCGGA	2 cut(s)	526, 691
BspFNI	CGCG	2 cut(s)	48, 102
BspLI	GGNNCC	4 cut(s)	307, 687, 710, 1164
BspMAI	CTGCAG	2 cut(s)	684, 976
BspPI	GGATC	6 cut(s)	12, 680, 693, 810, 1119, 1145
BsrI	ACTGG	3 cut(s)	118, 1020, 1201
BssECI	CCNNGG	5 cut(s)	46, 308, 329, 447, 555
BssMI	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
BssNI	GRCGYC	1 cut(s)	39
BssSI	CACGAG	1 cut(s)	941
BssT1I	CCWWGG	2 cut(s)	447, 555
Bst2BI	CACGAG	1 cut(s)	941
Bst2UI	CCWGG	2 cut(s)	331, 604
Bst4CI	ACNGT	3 cut(s)	225, 379, 1171
Bst6I	CTCTTC	2 cut(s)	449, 743
BstACI	GRCGYC	1 cut(s)	39
BstAPI	GCANNNNNTGC	1 cut(s)	1018
BstC8I	GCNNGC	6 cut(s)	30, 516, 536, 642, 860, 1266
BstDEI	CTNAG	5 cut(s)	139, 144, 252, 1214, 1275
BstDSI	CCRYGG	1 cut(s)	46
BstF5I	GGATG	7 cut(s)	523, 703, 724, 1101, 1234, 1238, 1315
BstFNI	CGCG	2 cut(s)	48, 102
BstKTI	GATC	9 cut(s)	7, 11, 688, 736, 805, 933, 1114, 1153, 1281
BstMAI	GTCTC	3 cut(s)	136, 392, 971
BstMBI	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
BstMCI	CGRYCG	2 cut(s)	11, 274
BstMWI	GCNNNNNNNGC	6 cut(s)	29, 38, 65, 74, 923, 1018
BstNI	CCWGG	2 cut(s)	331, 604
BstSCI	CCNGG	5 cut(s)	308, 329, 602, 862, 1241
BstSFI	CTRYAG	2 cut(s)	680, 972
BstUI	CGCG	2 cut(s)	48, 102
BstV1I	GCAGC	1 cut(s)	772
BstV2I	GAAGAC	3 cut(s)	111, 764, 874
BstX2I	RGATCY	1 cut(s)	685
BstYI	RGATCY	1 cut(s)	685
Bsu15I	ATCGAT	2 cut(s)	7, 736
BsuRI	GGCC	2 cut(s)	306, 951
BsuTUI	ATCGAT	2 cut(s)	7, 736
BtgI	CCRYGG	1 cut(s)	46
BtrI	CACGTC	3 cut(s)	598, 613, 1325
BtsCI	GGATG	7 cut(s)	523, 703, 724, 1101, 1234, 1238, 1315
BtsI	GCAGTG	1 cut(s)	677
BtsIMutI	CAGTG	1 cut(s)	677
Cac8I	GCNNGC	6 cut(s)	30, 516, 536, 642, 860, 1266
Cfr13I	GGNCC	2 cut(s)	305, 708
Cfr42I	CCGCGG	1 cut(s)	49
ClaI	ATCGAT	2 cut(s)	7, 736
CseI	GACGC	2 cut(s)	47, 612
Csp6I	GTAC	4 cut(s)	13, 226, 409, 1174
CviAII	CATG	4 cut(s)	593, 647, 953, 1282
CviQI	GTAC	4 cut(s)	13, 226, 409, 1174
DdeI	CTNAG	5 cut(s)	139, 144, 252, 1214, 1275
DpnI	GATC	9 cut(s)	6, 10, 687, 735, 804, 932, 1113, 1152, 1280
DpnII	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
DriI	GACNNNNNGTC	1 cut(s)	622
EaeI	YGGCCR	1 cut(s)	949
Eam1104I	CTCTTC	2 cut(s)	449, 743
Eam1105I	GACNNNNNGTC	1 cut(s)	622
EarI	CTCTTC	2 cut(s)	449, 743
Eco130I	CCWWGG	2 cut(s)	447, 555
Eco24I	GRGCYC	1 cut(s)	93
Eco47I	GGWCC	1 cut(s)	708
EcoO109I	RGGNCCY	1 cut(s)	305
EcoRII	CCWGG	2 cut(s)	329, 602
EcoT14I	CCWWGG	2 cut(s)	447, 555
EcoT22I	ATGCAT	1 cut(s)	853
EcoT38I	GRGCYC	1 cut(s)	93
ErhI	CCWWGG	2 cut(s)	447, 555
Esp3I	CGTCTC	2 cut(s)	136, 392
FaeI	CATG	4 cut(s)	596, 650, 956, 1285
FalI	AAGNNNNNCTT	1 cut(s)	1326
FaqI	GGGAC	4 cut(s)	312, 454, 518, 694
FatI	CATG	4 cut(s)	592, 646, 952, 1281
FauI	CCCGC	3 cut(s)	273, 523, 531
FblI	GTMKAC	2 cut(s)	36, 270
Fnu4HI	GCNGC	4 cut(s)	49, 78, 81, 786
FokI	GGATG	7 cut(s)	510, 710, 731, 1108, 1221, 1225, 1322
FriOI	GRGCYC	1 cut(s)	93
Fsp4HI	GCNGC	4 cut(s)	49, 78, 81, 786
GluI	GCNGC	4 cut(s)	49, 78, 81, 786
HaeIII	GGCC	2 cut(s)	306, 951
HapII	CCGG	7 cut(s)	274, 310, 527, 627, 692, 863, 1242
HgaI	GACGC	2 cut(s)	47, 612
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	4 cut(s)	596, 650, 956, 1285
HincII	GTYRAC	3 cut(s)	37, 271, 1051
HindII	GTYRAC	3 cut(s)	37, 271, 1051
HinfI	GANTC	6 cut(s)	207, 325, 403, 467, 724, 1205
HpaII	CCGG	7 cut(s)	274, 310, 527, 627, 692, 863, 1242
HphI	GGTGA	3 cut(s)	278, 367, 1214
Hpy166II	GTNNAC	7 cut(s)	37, 271, 286, 411, 616, 1051, 1174
Hpy188I	TCNGA	1 cut(s)	1217
Hpy188III	TCNNGA	7 cut(s)	242, 527, 692, 728, 941, 1072, 1089
Hpy8I	GTNNAC	7 cut(s)	37, 271, 286, 411, 616, 1051, 1174
Hpy99I	CGWCG	2 cut(s)	41, 931
HpyAV	CCTTC	3 cut(s)	52, 1086, 1328
HpyCH4III	ACNGT	3 cut(s)	225, 379, 1171
HpyCH4IV	ACGT	4 cut(s)	336, 597, 612, 1324
HpyCH4V	TGCA	9 cut(s)	249, 577, 682, 851, 974, 1004, 1012, 1211, 1313
HpyF10VI	GCNNNNNNNGC	6 cut(s)	29, 38, 65, 74, 923, 1018
HpyF3I	CTNAG	5 cut(s)	139, 144, 252, 1214, 1275
HpySE526I	ACGT	4 cut(s)	336, 597, 612, 1324
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	4 cut(s)	596, 650, 956, 1285
Kpn2I	TCCGGA	2 cut(s)	526, 691
KspI	CCGCGG	1 cut(s)	49
Kzo9I	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
LmnI	GCTCC	3 cut(s)	637, 1168, 1316
Lsp1109I	GCAGC	1 cut(s)	772
LweI	GCATC	2 cut(s)	904, 1300
MaeII	ACGT	4 cut(s)	336, 597, 612, 1324
MaeIII	GTNAC	4 cut(s)	598, 938, 1033, 1192
MalI	GATC	9 cut(s)	6, 10, 687, 735, 804, 932, 1113, 1152, 1280
MboI	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
MboII	GAAGA	9 cut(s)	111, 153, 162, 466, 760, 769, 874, 883, 1298
MflI	RGATCY	1 cut(s)	685
MhlI	GDGCHC	1 cut(s)	93
MlsI	TGGCCA	1 cut(s)	951
MluNI	TGGCCA	1 cut(s)	951
MlyI	GAGTC	2 cut(s)	334, 476
MmeI	TCCRAC	2 cut(s)	159, 1190
Mox20I	TGGCCA	1 cut(s)	951
Mph1103I	ATGCAT	1 cut(s)	853
MroI	TCCGGA	2 cut(s)	526, 691
MroXI	GAANNNNTTC	1 cut(s)	1338
MscI	TGGCCA	1 cut(s)	951
MslI	CAYNNNNRTG	2 cut(s)	651, 671
Msp20I	TGGCCA	1 cut(s)	951
MspA1I	CMGCKG	1 cut(s)	48
MspI	CCGG	7 cut(s)	274, 310, 527, 627, 692, 863, 1242
MspR9I	CCNGG	5 cut(s)	310, 331, 604, 864, 1243
MvaI	CCWGG	2 cut(s)	331, 604
MvnI	CGCG	2 cut(s)	48, 102
MwoI	GCNNNNNNNGC	6 cut(s)	29, 38, 65, 74, 923, 1018
NciI	CCSGG	3 cut(s)	310, 864, 1243
NdeII	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
NlaIII	CATG	4 cut(s)	596, 650, 956, 1285
NlaIV	GGNNCC	4 cut(s)	307, 687, 710, 1164
NmeAIII	GCCGAG	2 cut(s)	324, 943
NmuCI	GTSAC	2 cut(s)	598, 938
NsiI	ATGCAT	1 cut(s)	853
PdmI	GAANNNNTTC	1 cut(s)	1338
PfeI	GAWTC	4 cut(s)	207, 403, 724, 1205
PflMI	CCANNNNNTGG	1 cut(s)	958
PfoI	TCCNGGA	1 cut(s)	1241
PkrI	GCNGC	4 cut(s)	50, 79, 82, 787
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	2 cut(s)	333, 475
PpsI	GAGTC	2 cut(s)	333, 475
PsiI	TTATAA	1 cut(s)	431
Psp1406I	AACGTT	1 cut(s)	336
Psp6I	CCWGG	2 cut(s)	329, 602
PspGI	CCWGG	2 cut(s)	329, 602
PspN4I	GGNNCC	4 cut(s)	307, 687, 710, 1164
PspPI	GGNCC	2 cut(s)	305, 708
PstI	CTGCAG	2 cut(s)	684, 976
PsuI	RGATCY	1 cut(s)	685
PvuI	CGATCG	1 cut(s)	11
RsaI	GTAC	4 cut(s)	14, 227, 410, 1175
RsaNI	GTAC	4 cut(s)	13, 226, 409, 1174
RseI	CAYNNNNRTG	2 cut(s)	651, 671
SacII	CCGCGG	1 cut(s)	49
SalI	GTCGAC	2 cut(s)	35, 269
SatI	GCNGC	4 cut(s)	49, 78, 81, 786
Sau3AI	GATC	9 cut(s)	4, 8, 685, 733, 802, 930, 1111, 1150, 1278
Sau96I	GGNCC	2 cut(s)	305, 708
SchI	GAGTC	2 cut(s)	334, 476
ScrFI	CCNGG	5 cut(s)	310, 331, 604, 864, 1243
SduI	GDGCHC	1 cut(s)	93
SfaNI	GCATC	2 cut(s)	904, 1300
SfcI	CTRYAG	2 cut(s)	680, 972
Sfr303I	CCGCGG	1 cut(s)	49
SgrBI	CCGCGG	1 cut(s)	49
SinI	GGWCC	1 cut(s)	708
SmiMI	CAYNNNNRTG	2 cut(s)	651, 671
SmlI	CTYRAG	3 cut(s)	896, 1072, 1269
SmoI	CTYRAG	3 cut(s)	896, 1072, 1269
StyD4I	CCNGG	5 cut(s)	308, 329, 602, 862, 1241
StyI	CCWWGG	2 cut(s)	447, 555
TaaI	ACNGT	3 cut(s)	225, 379, 1171
TaiI	ACGT	4 cut(s)	339, 600, 615, 1327
TaqI	TCGA	6 cut(s)	7, 36, 270, 440, 736, 964
TatI	WGTACW	1 cut(s)	225
TauI	GCSGC	3 cut(s)	51, 80, 83
TfiI	GAWTC	4 cut(s)	207, 403, 724, 1205
TscAI	CASTG	1 cut(s)	684
TseFI	GTSAC	2 cut(s)	598, 938
TseI	GCWGC	1 cut(s)	785
Tsp45I	GTSAC	2 cut(s)	598, 938
TspDTI	ATGAA	1 cut(s)	500
TspGWI	ACGGA	2 cut(s)	118, 396
TspRI	CASTG	1 cut(s)	684
Van91I	CCANNNNNTGG	1 cut(s)	958
VpaK11BI	GGWCC	1 cut(s)	708
XapI	RAATTY	1 cut(s)	391
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmiI	GTMKAC	2 cut(s)	36, 270
XmnI	GAANNNNTTC	1 cut(s)	1338
Zsp2I	ATGCAT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.