FvH4_1g04580

Domain of unknown function (DUF4220)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
2422322 .. 2424642
2321 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04580.t1

Sequence Viewer

Length: 1968 bp
ATGGTTCAACTTTTGCCAGAAAGTGTGAACAAGCTATGGAACAAATGGGATGTCCGAATAATGATTGTAAGCAGCCTATGCTTGCAGATCATTTTGACAATCTTTGGAAACCGACGAAAGTACATATCCAGAAACTGGATTAGAGTTGTCACATGGGTAACGTACTTATCTGCAGATTGGGTTGCTACTGTCGCACTAGGAATGATATCCAACTTTCAAGGAGATGATCAAGCAGGTTCCTCGCATCCGAACAGCATGATCATCATGGCTTTTTGGGCACCGTTTCTTCTAGTGCACCTTGGCGGCCCAGACACTATCACTGCTTATGCGTTGGAAGACAATGAGCTCTGGCTAAGGCACCTATTGGGGTTAATTGTCCAGGTTGCAGTAGCTTTCCACATTTTTCTAAAATTTTGGACATCTAGCACGTACAACCTTTCGGTGTTAGCATTACCAATATTTGTTGCTGGAATTTTGAAGTATGGGGAAAGGACTTGGGTGCTGTGGTCTGCAAGCCGTGAAAAATTCAGTAACACGGTGGACATGTCGCATTCTAATGGAGGTCCTGATAATAATTTGCACTTCGAATCTGTTGATCCTCAAGCTAAACTTCTCCTTTTTGGCCACGAATTATTCAAGAATATCGTAAGGCATCTTTACTTAAATCTCTCCATTGATCGTCAAGATGTTAAACTCTGCTATGATGTGCTTTGTGGTTATTCATCAAAAGATTCAGAAGATGTTTTCAAACTTATGGAGGTCGAACTTGGCTTTATGTATGATGTGCTATACACAAAGGCAACCATAGTTCATTCTATCAGAGGTATCATTTTTCGCTCCATTACCCTGTTCTGCTACATTTCCACATTTGTAGTCTTTTGCATCCACATTGACAAGCAGCTTTACTACACCATTGATGTAACTCTCACTTACTTGTTGTCTGCCGGAGCCATTGTTCTTGAGCTATATTCCATCATTGTATTAGTCTTCACAGACTGGACACTATACTGGTTAATTAGCAACCGAAAACACACACTAGCTGACCGGATGTATAAAGTGATTTCTTCATCCTTTCCCTCAAAAGTGAGATGTAATAAGAGGTGGTCAAACACCATGGCACAATACAATCTCATTGATGTCTGCTTAAAAGTGAAGGGCGTCCCCAAGCATGTTGGAATCAAGAAGCTCATTGGCATCTGTGAAAAGTCCGAGAAGTATTGGTTTATGACTTTTGAGGATGTCTCGAAGGAAATGAAATTGTATATCCTTACGCAGCTACAAGATGCTCAAGCACTCATTCGAGATGGAAGAAGTGTTAAGGAAGTCTTGAATCGGAGGGGTAGTCAAGCGCTACAAGATAGAAATTGTTTAGAGCAACTCAGTTGGACCGTGACTGGCCCTCGCTTACCATTTCACAAGAGCATTCTTTACTGGCATATTGCAACAGATATATGCTACTATCACGATGTTGACACTCAAGGTATCTCTCCTACCTCCAAAATGAGCAAGTTATTATCGGATTATATGGCGTATATTCTTGTCATGCGCCCTTTCATGCTGCCGAAAGGAATTGGGCAGATTAGTGTTCGAGACACATGTTCTCATGCTATTGCATTTTGCAAAGAGAGAAGAAGACTCATCACTAATAGAAAAGATGCGCGTCGAGTCCTACTGCAAGAAGAGAGCATAGTTGCACCATCAGGGTTGGGAAAGTCGGTTTTATCTGAAGGGTGCAGGCTTGCGAGACATCTGCAGTTGCTAGATACAGAAAATGGGTGGAACAGCGAAGAAAAATGGAAAATGATAACCCAAGTGTGGGTTGAGCTGTTATGTTATGCAGCAAGCGAATGCGGATGGGAGCACCATGCCCAACAGCTCAGACGAGGAGGTGAGCTTCTTACTCACATATGCCTTCTAATGGCCCATCTTGGTTTGAGCGAACAACTCCCTCCCGGAAAACCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

656

Amino Acids

75.27

Weight (kDa)

8.81

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 52 - 379 8.8e-90 Domain of unknown function (DUF4220)
DUF594 PF04578 593 - 645 3.8e-23 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 224
AccB1I GGYRCC 2 cut(s) 277, 357
AccB7I CCANNNNNTGG 1 cut(s) 135
AccII CGCG 1 cut(s) 1660
AciI CCGC 2 cut(s) 303, 1851
AclWI GGATC 1 cut(s) 590
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 3 cut(s) 410, 471, 524
AcuI CTGAAG 1 cut(s) 1746
AcyI GRCGYC 1 cut(s) 1158
AfaI GTAC 3 cut(s) 122, 164, 431
AfeI AGCGCT 1 cut(s) 1350
AfiI CCNNNNNNNGG 4 cut(s) 135, 1815, 1816, 1918
AflIII ACRYGT 2 cut(s) 543, 1595
AgsI TTSAA 6 cut(s) 8, 218, 478, 637, 748, 1330
AjnI CCWGG 1 cut(s) 378
AloI GAACNNNNNNTCC 2 cut(s) 939, 971
Alw21I GWGCWC 3 cut(s) 297, 348, 1863
Alw26I GTCTC 3 cut(s) 1246, 1584, 1738
Alw44I GTGCAC 1 cut(s) 293
AlwI GGATC 1 cut(s) 590
AlwNI CAGNNNCTG 1 cut(s) 135
Aor51HI AGCGCT 1 cut(s) 1350
AoxI GGCC 4 cut(s) 304, 622, 1396, 1920
ApaLI GTGCAC 1 cut(s) 293
ApeKI GCWGC 5 cut(s) 72, 898, 1273, 1558, 1838
ApoI RAATTY 3 cut(s) 410, 471, 524
ArsI GACNNNNNNTTYG 2 cut(s) 36, 68
AspLEI GCGC 3 cut(s) 1351, 1548, 1660
AspS9I GGNCC 5 cut(s) 305, 563, 1386, 1397, 1921
AsuC2I CCSGG 1 cut(s) 1953
AsuHPI GGTGA 1 cut(s) 1901
AsuII TTCGAA 1 cut(s) 585
AvaII GGWCC 2 cut(s) 563, 1386
BaeGI GKGCMC 2 cut(s) 280, 297
BalI TGGCCA 1 cut(s) 624
BanI GGYRCC 2 cut(s) 277, 357
BanII GRGCYC 1 cut(s) 348
BbsI GAAGAC 3 cut(s) 342, 979, 1639
Bbv12I GWGCWC 3 cut(s) 297, 348, 1863
BbvI GCAGC 5 cut(s) 84, 910, 1285, 1545, 1850
BccI CCATC 5 cut(s) 980, 1298, 1705, 1848, 1932
BceAI ACGGC 1 cut(s) 501
BcgI CGANNNNNNTGC 4 cut(s) 222, 256, 1732, 1766
BciT130I CCWGG 1 cut(s) 380
BclI TGATCA 2 cut(s) 226, 258
BcnI CCSGG 1 cut(s) 1953
BcoDI GTCTC 3 cut(s) 1246, 1584, 1738
BfaI CTAG 7 cut(s) 197, 290, 423, 1037, 1760, 1962, 1966
BfmI CTRYAG 2 cut(s) 171, 1751
BfoI RGCGCY 1 cut(s) 1352
BfuAI ACCTGC 1 cut(s) 224
BisI GCNGC 6 cut(s) 73, 304, 899, 1274, 1559, 1839
BlsI GCNGC 6 cut(s) 74, 305, 900, 1275, 1560, 1840
Bme1390I CCNGG 2 cut(s) 380, 1953
Bme18I GGWCC 2 cut(s) 563, 1386
BmgT120I GGNCC 5 cut(s) 305, 563, 1386, 1397, 1921
BmiI GGNNCC 4 cut(s) 238, 279, 359, 949
BmrFI CCNGG 2 cut(s) 380, 1953
BmsI GCATC 6 cut(s) 253, 661, 891, 1203, 1273, 1645
BpiI GAAGAC 3 cut(s) 342, 979, 1639
BplI GAGNNNNNCTC 2 cut(s) 1226, 1258
Bpu10I CCTNAGC 1 cut(s) 353
Bpu14I TTCGAA 1 cut(s) 585
BpuEI CTTGAG 4 cut(s) 585, 980, 1272, 1461
BpuMI CCSGG 1 cut(s) 1953
BsaAI YACGTR 1 cut(s) 429
BsaHI GRCGYC 1 cut(s) 1158
BsaJI CCNNGG 2 cut(s) 298, 1113
BsaWI WCCGGW 1 cut(s) 1044
BsaXI ACNNNNNCTCC 4 cut(s) 939, 969, 1327, 1357
Bsc4I CCNNNNNNNGG 4 cut(s) 135, 1815, 1816, 1918
Bse1I ACTGG 5 cut(s) 140, 1001, 1013, 1399, 1436
BseBI CCWGG 1 cut(s) 380
BseDI CCNNGG 2 cut(s) 298, 1113
BseGI GGATG 7 cut(s) 55, 244, 882, 1053, 1067, 1243, 1859
BseLI CCNNNNNNNGG 4 cut(s) 135, 1815, 1816, 1918
BseMII CTCAG 2 cut(s) 1393, 1891
BseNI ACTGG 5 cut(s) 140, 1001, 1013, 1399, 1436
BseRI GAGGAG 1 cut(s) 1899
BseSI GKGCMC 2 cut(s) 280, 297
BseXI GCAGC 5 cut(s) 84, 910, 1285, 1545, 1850
BsgI GTGCAG 1 cut(s) 1753
Bsh1236I CGCG 1 cut(s) 1660
BshFI GGCC 4 cut(s) 306, 624, 1398, 1922
BshNI GGYRCC 2 cut(s) 277, 357
BsiHKAI GWGCWC 3 cut(s) 297, 348, 1863
BsiSI CCGG 3 cut(s) 945, 1045, 1953
BslFI GGGAC 1 cut(s) 1145
BslI CCNNNNNNNGG 4 cut(s) 135, 1815, 1816, 1918
BsmAI GTCTC 3 cut(s) 1246, 1584, 1738
BsmFI GGGAC 1 cut(s) 1145
BsmI GAATGC 3 cut(s) 550, 1422, 1853
BsnI GGCC 4 cut(s) 306, 624, 1398, 1922
Bsp119I TTCGAA 1 cut(s) 585
Bsp1286I GDGCHC 4 cut(s) 280, 297, 348, 1863
Bsp143I GATC 5 cut(s) 87, 226, 258, 595, 676
Bsp19I CCATGG 1 cut(s) 1113
BspACI CCGC 2 cut(s) 303, 1851
BspANI GGCC 4 cut(s) 306, 624, 1398, 1922
BspCNI CTCAG 2 cut(s) 1392, 1890
BspFNI CGCG 1 cut(s) 1660
BspLI GGNNCC 4 cut(s) 238, 279, 359, 949
BspMAI CTGCAG 2 cut(s) 175, 1755
BspMI ACCTGC 1 cut(s) 224
BspPI GGATC 1 cut(s) 590
BspT104I TTCGAA 1 cut(s) 585
BspT107I GGYRCC 2 cut(s) 277, 357
BsrI ACTGG 5 cut(s) 140, 1001, 1013, 1399, 1436
BssECI CCNNGG 2 cut(s) 298, 1113
BssMI GATC 5 cut(s) 87, 226, 258, 595, 676
BssNI GRCGYC 1 cut(s) 1158
BssT1I CCWWGG 2 cut(s) 298, 1113
Bst2UI CCWGG 1 cut(s) 380
Bst4CI ACNGT 4 cut(s) 190, 282, 538, 1390
Bst6I CTCTTC 1 cut(s) 1674
BstACI GRCGYC 1 cut(s) 1158
BstAPI GCANNNNNTGC 1 cut(s) 78
BstBAI YACGTR 1 cut(s) 429
BstBI TTCGAA 1 cut(s) 585
BstC8I GCNNGC 5 cut(s) 83, 514, 1736, 1740, 1843
BstDEI CTNAG 3 cut(s) 353, 1379, 1877
BstDSI CCRYGG 1 cut(s) 1113
BstF5I GGATG 7 cut(s) 55, 244, 882, 1053, 1067, 1243, 1859
BstFNI CGCG 1 cut(s) 1660
BstH2I RGCGCY 1 cut(s) 1352
BstHHI GCGC 3 cut(s) 1351, 1548, 1660
BstKTI GATC 5 cut(s) 90, 229, 261, 598, 679
BstMAI GTCTC 3 cut(s) 1246, 1584, 1738
BstMBI GATC 5 cut(s) 87, 226, 258, 595, 676
BstMWI GCNNNNNNNGC 3 cut(s) 78, 191, 275
BstNI CCWGG 1 cut(s) 380
BstNSI RCATGY 3 cut(s) 547, 1172, 1599
BstSCI CCNGG 2 cut(s) 378, 1951
BstSFI CTRYAG 2 cut(s) 171, 1751
BstSLI GKGCMC 2 cut(s) 280, 297
BstUI CGCG 1 cut(s) 1660
BstV1I GCAGC 5 cut(s) 84, 910, 1285, 1545, 1850
BstV2I GAAGAC 3 cut(s) 342, 979, 1639
BsuRI GGCC 4 cut(s) 306, 624, 1398, 1922
BtgI CCRYGG 1 cut(s) 1113
BtsCI GGATG 7 cut(s) 55, 244, 882, 1053, 1067, 1243, 1859
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 318
BveI ACCTGC 1 cut(s) 224
Cac8I GCNNGC 5 cut(s) 83, 514, 1736, 1740, 1843
CaiI CAGNNNCTG 1 cut(s) 135
CfoI GCGC 3 cut(s) 1351, 1548, 1660
Cfr13I GGNCC 5 cut(s) 305, 563, 1386, 1397, 1921
CseI GACGC 2 cut(s) 1147, 1649
Csp6I GTAC 3 cut(s) 121, 163, 430
CviQI GTAC 3 cut(s) 121, 163, 430
DdeI CTNAG 3 cut(s) 353, 1379, 1877
DpnI GATC 5 cut(s) 89, 228, 260, 597, 678
DpnII GATC 5 cut(s) 87, 226, 258, 595, 676
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 1674
EarI CTCTTC 1 cut(s) 1674
Ecl136II GAGCTC 1 cut(s) 346
Eco130I CCWWGG 2 cut(s) 298, 1113
Eco24I GRGCYC 1 cut(s) 348
Eco32I GATATC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 563, 1386
Eco47III AGCGCT 1 cut(s) 1350
Eco53kI GAGCTC 1 cut(s) 346
Eco57I CTGAAG 1 cut(s) 1746
EcoICRI GAGCTC 1 cut(s) 346
EcoO109I RGGNCCY 1 cut(s) 563
EcoRII CCWGG 1 cut(s) 378
EcoRV GATATC 1 cut(s) 207
EcoT14I CCWWGG 2 cut(s) 298, 1113
EcoT38I GRGCYC 1 cut(s) 348
ErhI CCWWGG 2 cut(s) 298, 1113
FalI AAGNNNNNCTT 4 cut(s) 594, 626, 1310, 1342
FaqI GGGAC 1 cut(s) 1145
FauNDI CATATG 1 cut(s) 1907
FbaI TGATCA 2 cut(s) 226, 258
Fnu4HI GCNGC 6 cut(s) 73, 304, 899, 1274, 1559, 1839
FokI GGATG 7 cut(s) 62, 231, 869, 1054, 1060, 1250, 1866
FriOI GRGCYC 1 cut(s) 348
Fsp4HI GCNGC 6 cut(s) 73, 304, 899, 1274, 1559, 1839
FspBI CTAG 7 cut(s) 197, 290, 423, 1037, 1760, 1962, 1966
GlaI GCGC 3 cut(s) 1350, 1547, 1659
GluI GCNGC 6 cut(s) 73, 304, 899, 1274, 1559, 1839
HaeII RGCGCY 1 cut(s) 1352
HaeIII GGCC 4 cut(s) 306, 624, 1398, 1922
HapII CCGG 3 cut(s) 945, 1045, 1953
HgaI GACGC 2 cut(s) 1147, 1649
HhaI GCGC 3 cut(s) 1351, 1548, 1660
Hin1I GRCGYC 1 cut(s) 1158
Hin6I GCGC 3 cut(s) 1349, 1546, 1658
HinP1I GCGC 3 cut(s) 1349, 1546, 1658
HincII GTYRAC 1 cut(s) 1471
HindII GTYRAC 1 cut(s) 1471
HinfI GANTC 6 cut(s) 587, 731, 1176, 1330, 1635, 1665
HpaII CCGG 3 cut(s) 945, 1045, 1953
HphI GGTGA 1 cut(s) 1901
Hpy166II GTNNAC 4 cut(s) 28, 295, 541, 1471
Hpy188I TCNGA 9 cut(s) 56, 249, 736, 821, 1210, 1335, 1519, 1726, 1880
Hpy8I GTNNAC 4 cut(s) 28, 295, 541, 1471
Hpy99I CGWCG 2 cut(s) 117, 1665
HpyAV CCTTC 4 cut(s) 1147, 1240, 1721, 1922
HpyCH4III ACNGT 4 cut(s) 190, 282, 538, 1390
HpyCH4IV ACGT 2 cut(s) 161, 428
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 191, 275
HpyF3I CTNAG 3 cut(s) 353, 1379, 1877
HpySE526I ACGT 2 cut(s) 161, 428
Hsp92I GRCGYC 1 cut(s) 1158
HspAI GCGC 3 cut(s) 1349, 1546, 1658
Ksp22I TGATCA 2 cut(s) 226, 258
Kzo9I GATC 5 cut(s) 87, 226, 258, 595, 676
LmnI GCTCC 3 cut(s) 842, 947, 1858
Lsp1109I GCAGC 5 cut(s) 84, 910, 1285, 1545, 1850
LweI GCATC 6 cut(s) 253, 661, 891, 1203, 1273, 1645
MaeI CTAG 7 cut(s) 197, 290, 423, 1037, 1760, 1962, 1966
MaeII ACGT 2 cut(s) 161, 428
MaeIII GTNAC 5 cut(s) 148, 157, 530, 919, 1390
MalI GATC 5 cut(s) 89, 228, 260, 597, 678
MboI GATC 5 cut(s) 87, 226, 258, 595, 676
MhlI GDGCHC 4 cut(s) 280, 297, 348, 1863
MlsI TGGCCA 1 cut(s) 624
MluNI TGGCCA 1 cut(s) 624
MlyI GAGTC 2 cut(s) 1629, 1674
MmeI TCCRAC 4 cut(s) 234, 312, 1153, 1364
Mox20I TGGCCA 1 cut(s) 624
MscI TGGCCA 1 cut(s) 624
MseI TTAA 6 cut(s) 371, 662, 690, 1013, 1145, 1317
MslI CAYNNNNRTG 1 cut(s) 555
Msp20I TGGCCA 1 cut(s) 624
MspI CCGG 3 cut(s) 945, 1045, 1953
MspR9I CCNGG 2 cut(s) 380, 1953
Mva1269I GAATGC 3 cut(s) 550, 1422, 1853
MvaI CCWGG 1 cut(s) 380
MvnI CGCG 1 cut(s) 1660
MwoI GCNNNNNNNGC 3 cut(s) 78, 191, 275
NciI CCSGG 1 cut(s) 1953
NcoI CCATGG 1 cut(s) 1113
NdeI CATATG 1 cut(s) 1907
NdeII GATC 5 cut(s) 87, 226, 258, 595, 676
NlaIV GGNNCC 4 cut(s) 238, 279, 359, 949
NmuCI GTSAC 2 cut(s) 148, 1390
NspI RCATGY 3 cut(s) 547, 1172, 1599
NspV TTCGAA 1 cut(s) 585
PciI ACATGT 2 cut(s) 543, 1595
PctI GAATGC 3 cut(s) 550, 1422, 1853
PfeI GAWTC 4 cut(s) 587, 731, 1176, 1330
PflMI CCANNNNNTGG 1 cut(s) 135
PfoI TCCNGGA 1 cut(s) 1951
PkrI GCNGC 6 cut(s) 74, 305, 900, 1275, 1560, 1840
PleI GAGTC 2 cut(s) 1629, 1673
PpsI GAGTC 2 cut(s) 1629, 1673
Ppu21I YACGTR 1 cut(s) 429
PpuMI RGGWCCY 1 cut(s) 563
PscI ACATGT 2 cut(s) 543, 1595
Psp124BI GAGCTC 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 563
Psp6I CCWGG 1 cut(s) 378
PspGI CCWGG 1 cut(s) 378
PspN4I GGNNCC 4 cut(s) 238, 279, 359, 949
PspPI GGNCC 5 cut(s) 305, 563, 1386, 1397, 1921
PspPPI RGGWCCY 1 cut(s) 563
PstI CTGCAG 2 cut(s) 175, 1755
PstNI CAGNNNCTG 1 cut(s) 135
RsaI GTAC 3 cut(s) 122, 164, 431
RsaNI GTAC 3 cut(s) 121, 163, 430
RseI CAYNNNNRTG 1 cut(s) 555
SacI GAGCTC 1 cut(s) 348
SaqAI TTAA 6 cut(s) 371, 662, 690, 1013, 1145, 1317
SatI GCNGC 6 cut(s) 73, 304, 899, 1274, 1559, 1839
Sau3AI GATC 5 cut(s) 87, 226, 258, 595, 676
Sau96I GGNCC 5 cut(s) 305, 563, 1386, 1397, 1921
SchI GAGTC 2 cut(s) 1629, 1674
ScrFI CCNGG 2 cut(s) 380, 1953
SduI GDGCHC 4 cut(s) 280, 297, 348, 1863
SfaNI GCATC 6 cut(s) 253, 661, 891, 1203, 1273, 1645
SfcI CTRYAG 2 cut(s) 171, 1751
SfuI TTCGAA 1 cut(s) 585
SinI GGWCC 2 cut(s) 563, 1386
SmiMI CAYNNNNRTG 1 cut(s) 555
SmlI CTYRAG 4 cut(s) 600, 959, 1287, 1476
SmoI CTYRAG 4 cut(s) 600, 959, 1287, 1476
SsiI CCGC 2 cut(s) 303, 1851
SspI AATATT 1 cut(s) 459
SspMI CTAG 7 cut(s) 197, 290, 423, 1037, 1760, 1962, 1966
SstI GAGCTC 1 cut(s) 348
StyD4I CCNGG 2 cut(s) 378, 1951
StyI CCWWGG 2 cut(s) 298, 1113
TaaI ACNGT 4 cut(s) 190, 282, 538, 1390
TaiI ACGT 2 cut(s) 164, 431
TaqI TCGA 6 cut(s) 585, 762, 1244, 1300, 1588, 1663
TatI WGTACW 1 cut(s) 120
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 4 cut(s) 587, 731, 1176, 1330
Tru1I TTAA 6 cut(s) 371, 662, 690, 1013, 1145, 1317
Tru9I TTAA 6 cut(s) 371, 662, 690, 1013, 1145, 1317
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 2 cut(s) 148, 1390
TseI GCWGC 5 cut(s) 72, 898, 1273, 1558, 1838
Tsp45I GTSAC 2 cut(s) 148, 1390
TspDTI ATGAA 5 cut(s) 711, 800, 1056, 1268, 1543
TspRI CASTG 1 cut(s) 325
Van91I CCANNNNNTGG 1 cut(s) 135
VneI GTGCAC 1 cut(s) 293
VpaK11BI GGWCC 2 cut(s) 563, 1386
XapI RAATTY 3 cut(s) 410, 471, 524
XceI RCATGY 3 cut(s) 547, 1172, 1599
XspI CTAG 7 cut(s) 197, 290, 423, 1037, 1760, 1962, 1966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.