Rh7CG369800

Domain of unknown function (DUF4220)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
46489608 .. 46495622
6015 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG369800.1

Sequence Viewer

Length: 2163 bp
ATGTTCTTCCTTTCATCATCTAATTTTACTGTTCTTCTTACTAACAACTGGAATTTTATTCAACCAGACAGAGACATGGCTCAAAGCTTTCCAGCTAATGTTGTGAAACTATGGAACGAATGGGACGTCCGGGTATTAGTTTTGACCAGCCTATGCTTACAAATTGTGCTAATCGTCTTTGGAAATCGACGAAAGTACACTGCTGGGATCTGGATCAGAATTGTCACATGGATGGCCTACTTATCAGCAGACTGGGTTGCTGCAGTTGCGCTTGGAATGATCTCCAATTTCCAAGGAGATGATGATCAACAAAACCCCCAACATCCAAACAACCTGATCATGGCTTCTTGGGCACCATTTCTTCTGGTGCACCTTGGCGGTCCAGATACCATTACTTCTTACTCAATGGAGGACAATGAACTTTGGTTAAGGCACTTACTAGGCTTAATAGTCCAGGTTGGAGTGGCTTTATACATCTTGATACGGACAGCTACCACTACCCGCCATGTGCTATTAGTAGTACCAGTGTTTGTTGCTGGAATTGTCAAGTATGGAGAGAGGACTTGGGTCCTGTGGTCTGCAAGCAACGAGAAGCTTAGTGACTCCTTGCTTCCACCTCCTAATTCTGGTAAAGGTAATTATGCTGAAATAGCAGAGAAATATAGTGCTATAAAAGCTCGAGGTGAAGGGGTAGCATTTTCTAGTACACTTACTGAAGGAACTTATACAGTGCAAGTGGATCCTGTTATTACTGAAGCCAAACCTCTCCAAGAAGCCCATGTATTATTCCAGATCTTTAGGCATCTTTACGCAAACCTCATCCTTGACTACAATCAATGTGGAGTATGCTATAAGATGATACGAGGCCATTCAGCAGAAGAGGTCTTCAAACAAATTGAAATTGAGCTTGGTTTTATGTCTGATGTGCTACACACAAAGGCAATTGTAGTGCATTCTCTCATGGGTGTCATATTCCGATCCTTCAGCTTGCTTTGCTGCATTTCCACAGCTGTGGTTTTTTGTTTCGTCATTGATAAGCAACTTTATTCCACCATTGACATAAGTCTGACTTACTTGTTGTCTTTTGGAGCTATTGGTCTTGAGCTATATGCCATCATGATACTAGTTTCCACAGATTGGTCTTTGTTGTGGTTGAGCAAGCAAAGACACCGACTAGCTTACCCTATCTATCGAGCAATCTCATCTGCTCGATCAAATTATTTTAGCAATGGCAAGAGGTGGTCAGAGTCCATGGCACAATTCAATCTCATCGACTTTTGTTTGAAAGAGAAACCCCCCAAGTGTGCTGGTATTCAAAGGGTTCTTGGTATCTATCAAATGGCTGAAGGGTATTGGTATACGACTTATAAAGATGTTCCTATTGAAATGAAACGGCTTATATTCAAGCAACTCAAAGATGCTACAGTGGAAGTAGAAAATCAAGTAATGATCTTAAAATGGAGGGGCAATCACGCTGTAGAAAACAAAGGTTGTATGGACTACTTTAGTTGGAGTCTGGTTGAACCCTTTGACAAAAGCATTCTTCTCTGGCACATTGCAACAGATTTATGCTTCTATAGTGATCTTGACGGATATGATCAGCAGGCCTGTCCTAATTCCAAGTCGAAGCACATGATCAGTAAATTATTGTCTGATTACATGATGTATCTTCTCGTCATGCGCCATTTTATGTTGCCAAAGGGTATTGGTCAGATTAGATTCCGAGACACATGTGCCGAGGCCACAACATTTTTTGAAAAGAAAAGAAATGTCATCACTAAGGGTAGAAGCCATGCTCGTCAGGCCCTTCTTGCGGTGAACACGGAGCTGTGCCCAGCTTCAATAATTGGAGATAGAAGCAAGACAGTGTTGTTTGAAGGTTGCATACTCGCCAAACAGTTGAAGTCACTGGAAACGGACCGGCAATGGAGTAACACAGATAAGTGGGAAATGATAAGTCAAGTGTGGATAGAGATGTTGTGTTATGCAGCAAGCCGATGTGAATGGAAGGAGCACGGTCAGCAGCTTAGGCGTGGGGGGGAGCTGCTTACTCATGTCTGCCTCCTCATGGCAAATCTTGGTGTGAGTAAACAATTTCAGATAACACGTGGCTCACCAACATTTGGTATAGAGGCTGTCCCACCCCGGAGCGCGCCAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

720

Amino Acids

82.06

Weight (kDa)

8.41

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 77 - 426 2.7e-89 Domain of unknown function (DUF4220)
DUF594 PF04578 643 - 695 4.1e-22 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1368
AatII GACGTC 1 cut(s) 129
AccB1I GGYRCC 1 cut(s) 352
AccB7I CCANNNNNTGG 2 cut(s) 1137, 2123
AccI GTMKAC 1 cut(s) 1358
AccII CGCG 1 cut(s) 2153
AciI CCGC 3 cut(s) 378, 502, 1814
AclWI GGATC 5 cut(s) 215, 221, 734, 747, 972
AcsI RAATTY 1 cut(s) 52
AcuI CTGAAG 4 cut(s) 735, 774, 967, 1365
AcvI CACGTG 1 cut(s) 2108
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 3 cut(s) 197, 522, 706
AfiI CCNNNNNNNGG 6 cut(s) 340, 626, 1137, 1813, 2068, 2123
AflIII ACRYGT 2 cut(s) 1730, 2105
AhlI ACTAGT 1 cut(s) 1123
AjnI CCWGG 1 cut(s) 453
AjuI GAANNNNNNNTTGG 2 cut(s) 891, 923
AleI CACNNNNGTG 1 cut(s) 1010
Alw21I GWGCWC 2 cut(s) 372, 2016
Alw26I GTCTC 2 cut(s) 66, 1719
Alw44I GTGCAC 1 cut(s) 368
AlwI GGATC 5 cut(s) 215, 221, 734, 747, 972
Ama87I CYCGRG 1 cut(s) 678
AoxI GGCC 5 cut(s) 234, 865, 1605, 1740, 1803
ApaLI GTGCAC 1 cut(s) 368
ApeKI GCWGC 5 cut(s) 260, 996, 1988, 2023, 2044
ApoI RAATTY 1 cut(s) 52
ArsI GACNNNNNNTTYG 2 cut(s) 111, 143
AspLEI GCGC 4 cut(s) 271, 1683, 2153, 2155
AspS9I GGNCC 4 cut(s) 380, 568, 1804, 1918
AsuC2I CCSGG 2 cut(s) 131, 2146
AsuHPI GGTGA 3 cut(s) 695, 1828, 2106
AvaI CYCGRG 1 cut(s) 678
AvaII GGWCC 3 cut(s) 380, 568, 1918
BaeGI GKGCMC 3 cut(s) 355, 372, 1835
BamHI GGATCC 1 cut(s) 739
BanI GGYRCC 1 cut(s) 352
BarI GAAGNNNNNNTAC 2 cut(s) 1869, 1901
BbrPI CACGTG 1 cut(s) 2108
BbsI GAAGAC 1 cut(s) 877
Bbv12I GWGCWC 2 cut(s) 372, 2016
BbvI GCAGC 5 cut(s) 247, 983, 2000, 2031, 2035
BccI CCATC 2 cut(s) 226, 1121
BceAI ACGGC 1 cut(s) 1409
BciT130I CCWGG 1 cut(s) 455
BclI TGATCA 4 cut(s) 304, 336, 1597, 1635
BcnI CCSGG 2 cut(s) 131, 2146
BcoDI GTCTC 2 cut(s) 66, 1719
BcuI ACTAGT 1 cut(s) 1123
BfaI CTAG 5 cut(s) 440, 702, 1124, 1175, 2161
BfmI CTRYAG 4 cut(s) 261, 1422, 1476, 1576
BglII AGATCT 1 cut(s) 792
BisI GCNGC 5 cut(s) 261, 997, 1989, 2024, 2045
BlsI GCNGC 5 cut(s) 262, 998, 1990, 2025, 2046
Bme1390I CCNGG 3 cut(s) 131, 455, 2146
Bme18I GGWCC 3 cut(s) 380, 568, 1918
BmeT110I CYCGRG 1 cut(s) 678
BmgT120I GGNCC 4 cut(s) 380, 568, 1804, 1918
BmiI GGNNCC 3 cut(s) 354, 569, 741
BmrFI CCNGG 3 cut(s) 131, 455, 2146
BmrI ACTGGG 1 cut(s) 262
BmsI GCATC 2 cut(s) 811, 1408
BmuI ACTGGG 1 cut(s) 262
BoxI GACNNNNGTC 2 cut(s) 566, 1062
BpiI GAAGAC 1 cut(s) 877
Bpu10I CCTNAGC 1 cut(s) 2027
BpuEI CTTGAG 1 cut(s) 1121
BpuMI CCSGG 2 cut(s) 131, 2146
BsaAI YACGTR 1 cut(s) 2108
BsaBI GATNNNNATC 2 cut(s) 212, 303
BsaHI GRCGYC 1 cut(s) 126
BsaJI CCNNGG 5 cut(s) 292, 373, 1251, 1737, 2144
Bsc4I CCNNNNNNNGG 6 cut(s) 340, 626, 1137, 1813, 2068, 2123
Bse118I RCCGGY 1 cut(s) 1920
Bse1I ACTGG 4 cut(s) 53, 257, 524, 1914
Bse3DI GCAATG 3 cut(s) 1234, 1554, 1931
Bse8I GATNNNNATC 2 cut(s) 212, 303
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 5 cut(s) 292, 373, 1251, 1737, 2144
BseGI GGATG 3 cut(s) 237, 322, 819
BseJI GATNNNNATC 2 cut(s) 212, 303
BseLI CCNNNNNNNGG 6 cut(s) 340, 626, 1137, 1813, 2068, 2123
BseMI GCAATG 3 cut(s) 1234, 1554, 1931
BseNI ACTGG 4 cut(s) 53, 257, 524, 1914
BsePI GCGCGC 1 cut(s) 2151
BseRI GAGGAG 1 cut(s) 2054
BseSI GKGCMC 3 cut(s) 355, 372, 1835
BseXI GCAGC 5 cut(s) 247, 983, 2000, 2031, 2035
BseYI CCCAGC 2 cut(s) 203, 1834
Bsh1236I CGCG 1 cut(s) 2153
BshFI GGCC 5 cut(s) 236, 867, 1607, 1742, 1805
BshNI GGYRCC 1 cut(s) 352
BsiHKAI GWGCWC 2 cut(s) 372, 2016
BsiHKCI CYCGRG 1 cut(s) 678
BsiSI CCGG 3 cut(s) 130, 1921, 2146
BslFI GGGAC 2 cut(s) 137, 2123
BslI CCNNNNNNNGG 6 cut(s) 340, 626, 1137, 1813, 2068, 2123
BsmAI GTCTC 2 cut(s) 66, 1719
BsmFI GGGAC 2 cut(s) 137, 2123
BsmI GAATGC 2 cut(s) 952, 1539
BsnI GGCC 5 cut(s) 236, 867, 1607, 1742, 1805
BsoBI CYCGRG 1 cut(s) 678
Bsp1286I GDGCHC 4 cut(s) 355, 372, 1835, 2016
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 3 cut(s) 378, 502, 1814
BspANI GGCC 5 cut(s) 236, 867, 1607, 1742, 1805
BspFNI CGCG 1 cut(s) 2153
BspHI TCATGA 1 cut(s) 1116
BspLI GGNNCC 3 cut(s) 354, 569, 741
BspMAI CTGCAG 1 cut(s) 265
BspPI GGATC 5 cut(s) 215, 221, 734, 747, 972
BspT107I GGYRCC 1 cut(s) 352
BsrDI GCAATG 3 cut(s) 1234, 1554, 1931
BsrFI RCCGGY 1 cut(s) 1920
BsrI ACTGG 4 cut(s) 53, 257, 524, 1914
BssAI RCCGGY 1 cut(s) 1920
BssECI CCNNGG 5 cut(s) 292, 373, 1251, 1737, 2144
BssHII GCGCGC 1 cut(s) 2151
BssNAI GTATAC 1 cut(s) 1359
BssNI GRCGYC 1 cut(s) 126
BssT1I CCWWGG 3 cut(s) 292, 373, 1251
Bst1107I GTATAC 1 cut(s) 1359
Bst2UI CCWGG 1 cut(s) 455
Bst4CI ACNGT 6 cut(s) 31, 730, 1426, 1867, 1899, 2018
Bst6I CTCTTC 1 cut(s) 873
BstACI GRCGYC 1 cut(s) 126
BstBAI YACGTR 1 cut(s) 2108
BstC8I GCNNGC 6 cut(s) 583, 989, 1160, 1605, 1993, 2153
BstDEI CTNAG 3 cut(s) 596, 1779, 2027
BstDSI CCRYGG 1 cut(s) 1251
BstF5I GGATG 3 cut(s) 237, 322, 819
BstFNI CGCG 1 cut(s) 2153
BstHHI GCGC 4 cut(s) 271, 1683, 2153, 2155
BstMAI GTCTC 2 cut(s) 66, 1719
BstMWI GCNNNNNNNGC 9 cut(s) 266, 350, 650, 674, 993, 1802, 1811, 2020, 2029
BstNI CCWGG 1 cut(s) 455
BstNSI RCATGY 1 cut(s) 1734
BstPAI GACNNNNGTC 2 cut(s) 566, 1062
BstSCI CCNGG 3 cut(s) 129, 453, 2144
BstSFI CTRYAG 4 cut(s) 261, 1422, 1476, 1576
BstSLI GKGCMC 3 cut(s) 355, 372, 1835
BstUI CGCG 1 cut(s) 2153
BstV1I GCAGC 5 cut(s) 247, 983, 2000, 2031, 2035
BstV2I GAAGAC 1 cut(s) 877
BstX2I RGATCY 3 cut(s) 207, 739, 792
BstXI CCANNNNNNTGG 1 cut(s) 1012
BstYI RGATCY 3 cut(s) 207, 739, 792
BstZ17I GTATAC 1 cut(s) 1359
BsuRI GGCC 5 cut(s) 236, 867, 1607, 1742, 1805
BtgI CCRYGG 1 cut(s) 1251
BtsCI GGATG 3 cut(s) 237, 322, 819
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 6 cut(s) 198, 531, 735, 1431, 1872, 1907
Cac8I GCNNGC 6 cut(s) 583, 989, 1160, 1605, 1993, 2153
CciI TCATGA 1 cut(s) 1116
CfoI GCGC 4 cut(s) 271, 1683, 2153, 2155
Cfr10I RCCGGY 1 cut(s) 1920
Cfr13I GGNCC 4 cut(s) 380, 568, 1804, 1918
CpoI CGGWCCG 1 cut(s) 1918
Csp6I GTAC 3 cut(s) 196, 521, 705
CspCI CAANNNNNGTGG 2 cut(s) 820, 855
CspI CGGWCCG 1 cut(s) 1918
CviQI GTAC 3 cut(s) 196, 521, 705
DdeI CTNAG 3 cut(s) 596, 1779, 2027
Eam1104I CTCTTC 1 cut(s) 873
EarI CTCTTC 1 cut(s) 873
Eco130I CCWWGG 3 cut(s) 292, 373, 1251
Eco147I AGGCCT 1 cut(s) 1607
Eco47I GGWCC 3 cut(s) 380, 568, 1918
Eco57I CTGAAG 4 cut(s) 735, 774, 967, 1365
Eco72I CACGTG 1 cut(s) 2108
Eco88I CYCGRG 1 cut(s) 678
EcoO109I RGGNCCY 2 cut(s) 568, 1804
EcoRII CCWGG 1 cut(s) 453
EcoT14I CCWWGG 3 cut(s) 292, 373, 1251
ErhI CCWWGG 3 cut(s) 292, 373, 1251
FalI AAGNNNNNCTT 2 cut(s) 1054, 1086
FaqI GGGAC 2 cut(s) 137, 2123
FauI CCCGC 1 cut(s) 509
FbaI TGATCA 4 cut(s) 304, 336, 1597, 1635
FblI GTMKAC 1 cut(s) 1358
Fnu4HI GCNGC 5 cut(s) 261, 997, 1989, 2024, 2045
FokI GGATG 3 cut(s) 244, 309, 806
Fsp4HI GCNGC 5 cut(s) 261, 997, 1989, 2024, 2045
FspBI CTAG 5 cut(s) 440, 702, 1124, 1175, 2161
GlaI GCGC 4 cut(s) 270, 1682, 2152, 2154
GluI GCNGC 5 cut(s) 261, 997, 1989, 2024, 2045
GsaI CCCAGC 2 cut(s) 207, 1838
HaeIII GGCC 5 cut(s) 236, 867, 1607, 1742, 1805
HapII CCGG 3 cut(s) 130, 1921, 2146
HhaI GCGC 4 cut(s) 271, 1683, 2153, 2155
Hin1I GRCGYC 1 cut(s) 126
Hin6I GCGC 4 cut(s) 269, 1681, 2151, 2153
HinP1I GCGC 4 cut(s) 269, 1681, 2151, 2153
HindIII AAGCTT 2 cut(s) 85, 593
HinfI GANTC 4 cut(s) 602, 1247, 1513, 1719
HpaII CCGG 3 cut(s) 130, 1921, 2146
HphI GGTGA 3 cut(s) 695, 1828, 2106
Hpy166II GTNNAC 6 cut(s) 198, 370, 707, 1359, 1819, 2090
Hpy188I TCNGA 9 cut(s) 218, 922, 977, 1068, 1246, 1654, 1713, 1724, 2100
Hpy188III TCNNGA 7 cut(s) 211, 383, 478, 790, 1100, 1117, 1586
Hpy8I GTNNAC 6 cut(s) 198, 370, 707, 1359, 1819, 2090
Hpy99I CGWCG 1 cut(s) 192
HpyAV CCTTC 7 cut(s) 680, 710, 991, 1340, 1817, 1871, 2002
HpyCH4III ACNGT 6 cut(s) 31, 730, 1426, 1867, 1899, 2018
HpyCH4IV ACGT 2 cut(s) 126, 2107
HpyCH4V TGCA 9 cut(s) 263, 370, 581, 733, 952, 999, 1559, 1884, 1988
HpyF10VI GCNNNNNNNGC 9 cut(s) 266, 350, 650, 674, 993, 1802, 1811, 2020, 2029
HpyF3I CTNAG 3 cut(s) 596, 1779, 2027
HpySE526I ACGT 2 cut(s) 126, 2107
Hsp92I GRCGYC 1 cut(s) 126
HspAI GCGC 4 cut(s) 269, 1681, 2151, 2153
Ksp22I TGATCA 4 cut(s) 304, 336, 1597, 1635
LmnI GCTCC 5 cut(s) 1088, 1825, 2011, 2041, 2148
Lsp1109I GCAGC 5 cut(s) 247, 983, 2000, 2031, 2035
LweI GCATC 2 cut(s) 811, 1408
MaeI CTAG 5 cut(s) 440, 702, 1124, 1175, 2161
MaeII ACGT 2 cut(s) 126, 2107
MaeIII GTNAC 4 cut(s) 223, 599, 1905, 1931
MboII GAAGA 6 cut(s) 26, 353, 877, 890, 1535, 1661
MfeI CAATTG 1 cut(s) 942
MflI RGATCY 3 cut(s) 207, 739, 792
MhlI GDGCHC 4 cut(s) 355, 372, 1835, 2016
MlyI GAGTC 3 cut(s) 596, 1256, 1522
MmeI TCCRAC 2 cut(s) 439, 1490
MseI TTAA 3 cut(s) 428, 446, 1454
MslI CAYNNNNRTG 2 cut(s) 230, 1010
MspA1I CMGCKG 1 cut(s) 1010
MspI CCGG 3 cut(s) 130, 1921, 2146
MspR9I CCNGG 3 cut(s) 131, 455, 2146
MunI CAATTG 1 cut(s) 942
Mva1269I GAATGC 2 cut(s) 952, 1539
MvaI CCWGG 1 cut(s) 455
MvnI CGCG 1 cut(s) 2153
MwoI GCNNNNNNNGC 9 cut(s) 266, 350, 650, 674, 993, 1802, 1811, 2020, 2029
NciI CCSGG 2 cut(s) 131, 2146
NcoI CCATGG 1 cut(s) 1251
NlaIV GGNNCC 3 cut(s) 354, 569, 741
NmeAIII GCCGAG 1 cut(s) 1762
NmuCI GTSAC 3 cut(s) 223, 599, 1905
NspI RCATGY 1 cut(s) 1734
OliI CACNNNNGTG 1 cut(s) 1010
PaeR7I CTCGAG 1 cut(s) 678
PagI TCATGA 1 cut(s) 1116
PauI GCGCGC 1 cut(s) 2151
PceI AGGCCT 1 cut(s) 1607
PciI ACATGT 1 cut(s) 1730
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 2 cut(s) 952, 1539
PfeI GAWTC 1 cut(s) 1719
PflMI CCANNNNNTGG 2 cut(s) 1137, 2123
PkrI GCNGC 5 cut(s) 262, 998, 1990, 2025, 2046
PleI GAGTC 3 cut(s) 596, 1255, 1521
PmaCI CACGTG 1 cut(s) 2108
PmlI CACGTG 1 cut(s) 2108
PpsI GAGTC 3 cut(s) 596, 1255, 1521
Ppu21I YACGTR 1 cut(s) 2108
PpuMI RGGWCCY 1 cut(s) 568
PscI ACATGT 1 cut(s) 1730
PshAI GACNNNNGTC 2 cut(s) 566, 1062
PsiI TTATAA 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 568
Psp6I CCWGG 1 cut(s) 453
PspCI CACGTG 1 cut(s) 2108
PspFI CCCAGC 2 cut(s) 203, 1834
PspGI CCWGG 1 cut(s) 453
PspN4I GGNNCC 3 cut(s) 354, 569, 741
PspPI GGNCC 4 cut(s) 380, 568, 1804, 1918
PspPPI RGGWCCY 1 cut(s) 568
PspXI VCTCGAGB 1 cut(s) 678
PstI CTGCAG 1 cut(s) 265
PsuI RGATCY 3 cut(s) 207, 739, 792
PteI GCGCGC 1 cut(s) 2151
PvuII CAGCTG 1 cut(s) 1010
RsaI GTAC 3 cut(s) 197, 522, 706
RsaNI GTAC 3 cut(s) 196, 521, 705
RseI CAYNNNNRTG 2 cut(s) 230, 1010
Rsr2I CGGWCCG 1 cut(s) 1918
RsrII CGGWCCG 1 cut(s) 1918
SaqAI TTAA 3 cut(s) 428, 446, 1454
SatI GCNGC 5 cut(s) 261, 997, 1989, 2024, 2045
Sau96I GGNCC 4 cut(s) 380, 568, 1804, 1918
SchI GAGTC 3 cut(s) 596, 1256, 1522
ScrFI CCNGG 3 cut(s) 131, 455, 2146
SduI GDGCHC 4 cut(s) 355, 372, 1835, 2016
SfaNI GCATC 2 cut(s) 811, 1408
SfcI CTRYAG 4 cut(s) 261, 1422, 1476, 1576
Sfr274I CTCGAG 1 cut(s) 678
SinI GGWCC 3 cut(s) 380, 568, 1918
SlaI CTCGAG 1 cut(s) 678
SmiMI CAYNNNNRTG 2 cut(s) 230, 1010
SmlI CTYRAG 2 cut(s) 678, 1100
SmoI CTYRAG 2 cut(s) 678, 1100
SpeI ACTAGT 1 cut(s) 1123
SseBI AGGCCT 1 cut(s) 1607
SsiI CCGC 3 cut(s) 378, 502, 1814
SspMI CTAG 5 cut(s) 440, 702, 1124, 1175, 2161
StuI AGGCCT 1 cut(s) 1607
StyD4I CCNGG 3 cut(s) 129, 453, 2144
StyI CCWWGG 3 cut(s) 292, 373, 1251
TaaI ACNGT 6 cut(s) 31, 730, 1426, 1867, 1899, 2018
TaiI ACGT 2 cut(s) 129, 2110
TaqI TCGA 6 cut(s) 187, 679, 1192, 1210, 1272, 1625
TatI WGTACW 2 cut(s) 195, 704
TfiI GAWTC 1 cut(s) 1719
Tru1I TTAA 3 cut(s) 428, 446, 1454
Tru9I TTAA 3 cut(s) 428, 446, 1454
TscAI CASTG 6 cut(s) 205, 531, 735, 1431, 1872, 1914
TseFI GTSAC 3 cut(s) 223, 599, 1905
TseI GCWGC 5 cut(s) 260, 996, 1988, 2023, 2044
Tsp45I GTSAC 3 cut(s) 223, 599, 1905
TspDTI ATGAA 2 cut(s) 432, 1403
TspGWI ACGGA 4 cut(s) 499, 1605, 1838, 1931
TspRI CASTG 6 cut(s) 205, 531, 735, 1431, 1872, 1914
Van91I CCANNNNNTGG 2 cut(s) 1137, 2123
VneI GTGCAC 1 cut(s) 368
VpaK11BI GGWCC 3 cut(s) 380, 568, 1918
XapI RAATTY 1 cut(s) 52
XceI RCATGY 1 cut(s) 1734
XhoI CTCGAG 1 cut(s) 678
XmiI GTMKAC 1 cut(s) 1358
XspI CTAG 5 cut(s) 440, 702, 1124, 1175, 2161
ZraI GACGTC 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.