pycom17g16040

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000618
Physical Location & Seq
Reverse (-)
14312810 .. 14315031
2222 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g16040.2

Sequence Viewer

Length: 2106 bp
ATGTTACTCACAGTTGTAAGCAGTTTGATCTTCACACAGAACAGGAAGGCAATGCAAATTTTCCCTGAAAGCGTGAGAGAAATCTGGAACGAGTGGGAGCTTCGAGCCATGGTTCTAATCAGCCTTGCCTTGCAAGCCATCCTCATCCTGATCGGCAACTGGAGAAAGCATTCAACCAGCAACATACTCCGAATTGTCCTCTGGCTCGCTTACTTGTCAGCTGACTCTGTTGGAACCGTCTCACTTGGGATTCTCTCCAGCAACCAGGAAGACTCCGAAGGTGATTCTGTAAACCCTAACTTTGTTATAACAGCATTCTGGGCACCATTTCTTCTATTGCATCTGGGCGGTCCAGATACGATTACCGCTTACTCGTTGGAGGATAATGAGTTGTGGCTTAGGCACTTGCTTGGGTTAGTTGTCCAGGTGATTGTAGCTTTGTATGTGTTTATAAGAGCATGGTCTAGTGAAGTGTTGAATTTTTTGGCAATTCCCGTTTTCGTAGTTGGGATTATAAAATTTGGGGAGAGGACTTGGGTTTTGAGGTCTGCAAGTAGTGAGCATTTTCGAGAGTCTATGCTCCCTCCTCCGGACGCAGGTCCGAATTATGCTAGATACATGGAAGAATACAGCTCAAAGAAAGCGGAGGGGTTTAGGGTTGAACCGAAAACATTCATTGAAGCTCCCCCAGATCATTCCTATGCTGTTCAACCTGATGGATCTAGTAGCGCCCAAGATGCTGCAGTTTTAAGCAAAGCTTATATTTTGTTTGAAACTTTCAAGCGGCTGTGTGCCGATCTCATCCTCACCTTCCACGACATAGAAAACAGCCAATCGTTCTTCAAAAGTAAAACCTCTGAGAAAGCTCTCGAGGTTATTGAGCTCGAGTTAGGGTTCATGTATGATGTGTTTTATACTAAATCACTTCTGGTTTATTCTGGTGTTGGTGGAATTCTCCGTTGTATTACTCTTTCTTTCACAGTTTGTGTGTTCCTAGCCTTCTTGTTGATCACGGGGAAGCAAGAATACATGAAAGTGGATGTAATTATCACATACATATTGTTGGTTGGAGCTATTGTCTTAGAATTTTATGCAGTTGTCGTAATACTTTCGTCGGACTGGACCCGGCTGTGGCTGAGCAAGCACAAAAACACGGCTGTAGATCTCTTGCACAGAGCGGCTTCATCAATCCCTTGGATAAAAGACAAGAGGTGGTCTAATACCTTGGCACAATACAACCTCATAACATTTTGTCTCAAAGAAAGGCCAGCAAAGTGCATTTTCATCAACGAGGACTTGTTTATAAATCGGTTGCTAGAGAAGTATCGATACACAGACTTGAAGGATGTTTCCAAAGAGTTGAAGAATTTGATATTTAGGCAGCTGCTAGACAAGTCGAAGACTGCTTCTAATTTCGAGGCCAGCAGACTGAAAGAACTATGTGCTCGAAGGGGCAACAGGGTGCTTGAGAAAGCAAAATGTCTAGATGAACTTGGCTGGACAATTAATGGGGCCGAATTTGATCAAAGCATCATTCTTTGGCATATTGCGACAGATCTATGTTACTATTCTGATCTGAACAGAAACCGCGAAATGGGATTGGACAGCAGGGTGTTATCAAACTATATGTTGTATCTTTTGGTGATGTGCCCCTTCATGCTGCCAAATGGGATTGGACAGATTAGGTTTAGAGACACCTGTGCCGAGGCTAAGGAGTTTATCGCCGAAAGAAAATCCATAAAGGATGCAGAAAAGGCCTGCACGATGCTGCTCAAAGTGAGCACAGACATCCTTCCATCGAAAGTGAAGGGAGATAGAAGCAAGTCGGTTCTATTTGATGCATGCAGGCTCGCTAAAGCTCTGCAGTCCCTTGAGGATAAGGGACATTGGGAGAACAATGAGAAAAAATGGGAGTTTATAAGTCATGTGTGGGTGGAAATGCTCTCTTTCGCGGCCAATCAGTGCCGGTGGAGAGATCATGCTCAGCAGCTCAGGCGAGGAGGAGAGCTGCTCACTCATATCTGGCTTCTTATGGCACATCTTGGTTTAACTGAACAGTTTCAAATTTCAGAGGGCCATGTTAGGGCAAAGTTGATTGTGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

702

Amino Acids

80.26

Weight (kDa)

7.21

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 308, 452, 515, 1304, 1919
Acc36I ACCTGC 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 322
AccBSI CCGCTC 1 cut(s) 1178
AccII CGCG 2 cut(s) 1590, 1952
AccIII TCCGGA 1 cut(s) 589
AciI CCGC 7 cut(s) 348, 366, 644, 784, 1178, 1588, 1952
AclWI GGATC 1 cut(s) 727
AcoI YGGCCR 1 cut(s) 1953
AcsI RAATTY 8 cut(s) 57, 478, 518, 951, 1085, 1366, 1517, 2064
AfiI CCNNNNNNNGG 5 cut(s) 589, 596, 1131, 1594, 2083
AjnI CCWGG 2 cut(s) 264, 423
Alw21I GWGCWC 3 cut(s) 885, 1447, 1784
Alw26I GTCTC 3 cut(s) 244, 1259, 1686
AlwI GGATC 1 cut(s) 727
Ama87I CYCGRG 2 cut(s) 869, 884
Aor13HI TCCGGA 1 cut(s) 589
AoxI GGCC 6 cut(s) 1265, 1419, 1512, 1755, 1953, 2074
ApeKI GCWGC 7 cut(s) 740, 1381, 1384, 1660, 1768, 1987, 2008
ApoI RAATTY 8 cut(s) 57, 478, 518, 951, 1085, 1366, 1517, 2064
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AseI ATTAAT 1 cut(s) 1506
Asp700I GAANNNNTTC 3 cut(s) 169, 671, 2058
AspLEI GCGC 1 cut(s) 731
AspS9I GGNCC 5 cut(s) 350, 599, 1122, 1512, 2074
AsuC2I CCSGG 1 cut(s) 1126
AsuHPI GGTGA 4 cut(s) 293, 439, 799, 1654
AvaI CYCGRG 2 cut(s) 869, 884
AvaII GGWCC 3 cut(s) 350, 599, 1122
BaeGI GKGCMC 2 cut(s) 325, 1652
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 885
BarI GAAGNNNNNNTAC 4 cut(s) 1010, 1042, 1313, 1345
BbsI GAAGAC 2 cut(s) 276, 1406
Bbv12I GWGCWC 3 cut(s) 885, 1447, 1784
BbvI GCAGC 7 cut(s) 727, 1371, 1393, 1647, 1755, 1995, 1999
BccI CCATC 3 cut(s) 146, 710, 1804
BceAI ACGGC 1 cut(s) 1170
BciT130I CCWGG 2 cut(s) 266, 425
BclI TGATCA 2 cut(s) 1008, 1522
BcnI CCSGG 1 cut(s) 1126
BcoDI GTCTC 3 cut(s) 244, 1259, 1686
BfaI CTAG 7 cut(s) 465, 612, 723, 995, 1316, 1388, 1484
BfmI CTRYAG 3 cut(s) 741, 1158, 1862
BfoI RGCGCY 1 cut(s) 732
BfuAI ACCTGC 1 cut(s) 587
BglII AGATCT 2 cut(s) 1162, 1555
BlpI GCTNAGC 2 cut(s) 1136, 1983
Bme1390I CCNGG 3 cut(s) 266, 425, 1126
Bme18I GGWCC 3 cut(s) 350, 599, 1122
BmeT110I CYCGRG 2 cut(s) 869, 884
BmgT120I GGNCC 5 cut(s) 350, 599, 1122, 1512, 2074
BmiI GGNNCC 4 cut(s) 235, 324, 1124, 1513
BmrFI CCNGG 3 cut(s) 266, 425, 1126
BmsI GCATC 6 cut(s) 349, 727, 1539, 1735, 1755, 1828
BoxI GACNNNNGTC 1 cut(s) 597
BpiI GAAGAC 2 cut(s) 276, 1406
BplI GAGNNNNNCTC 2 cut(s) 1995, 2027
BpmI CTGGAG 2 cut(s) 181, 241
Bpu10I CCTNAGC 3 cut(s) 398, 1710, 1991
Bpu1102I GCTNAGC 2 cut(s) 1136, 1983
BpuEI CTTGAG 2 cut(s) 1487, 1892
BpuMI CCSGG 1 cut(s) 1126
Bsa29I ATCGAT 1 cut(s) 1327
BsaJI CCNNGG 4 cut(s) 108, 1193, 1224, 1704
BsaWI WCCGGW 1 cut(s) 589
BsaXI ACNNNNNCTCC 2 cut(s) 1062, 1092
Bsc4I CCNNNNNNNGG 5 cut(s) 589, 596, 1131, 1594, 2083
Bse118I RCCGGY 1 cut(s) 1965
Bse1I ACTGG 2 cut(s) 164, 1124
Bse3DI GCAATG 1 cut(s) 57
BseAI TCCGGA 1 cut(s) 589
BseBI CCWGG 2 cut(s) 266, 425
BseCI ATCGAT 1 cut(s) 1327
BseDI CCNNGG 4 cut(s) 108, 1193, 1224, 1704
BseGI GGATG 7 cut(s) 138, 144, 801, 1045, 1351, 1750, 1788
BseLI CCNNNNNNNGG 5 cut(s) 589, 596, 1131, 1594, 2083
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 4 cut(s) 849, 1127, 1997, 2005
BseNI ACTGG 2 cut(s) 164, 1124
BseRI GAGGAG 3 cut(s) 576, 2013, 2016
BseSI GKGCMC 2 cut(s) 325, 1652
BseXI GCAGC 7 cut(s) 727, 1371, 1393, 1647, 1755, 1995, 1999
BsgI GTGCAG 1 cut(s) 1744
Bsh1236I CGCG 2 cut(s) 1590, 1952
BshFI GGCC 6 cut(s) 1267, 1421, 1514, 1757, 1955, 2076
BshNI GGYRCC 1 cut(s) 322
BshVI ATCGAT 1 cut(s) 1327
BsiHKAI GWGCWC 3 cut(s) 885, 1447, 1784
BsiHKCI CYCGRG 2 cut(s) 869, 884
BsiSI CCGG 3 cut(s) 590, 1126, 1966
BslFI GGGAC 2 cut(s) 1852, 1896
BslI CCNNNNNNNGG 5 cut(s) 589, 596, 1131, 1594, 2083
BsmAI GTCTC 3 cut(s) 244, 1259, 1686
BsmBI CGTCTC 1 cut(s) 244
BsmFI GGGAC 2 cut(s) 1852, 1896
BsmI GAATGC 2 cut(s) 169, 314
BsnI GGCC 6 cut(s) 1267, 1421, 1514, 1757, 1955, 2076
BsoBI CYCGRG 2 cut(s) 869, 884
Bsp1286I GDGCHC 5 cut(s) 325, 885, 1447, 1652, 1784
Bsp13I TCCGGA 1 cut(s) 589
Bsp1720I GCTNAGC 2 cut(s) 1136, 1983
Bsp19I CCATGG 1 cut(s) 108
BspACI CCGC 7 cut(s) 348, 366, 644, 784, 1178, 1588, 1952
BspANI GGCC 6 cut(s) 1267, 1421, 1514, 1757, 1955, 2076
BspCNI CTCAG 4 cut(s) 850, 1128, 1996, 2004
BspDI ATCGAT 1 cut(s) 1327
BspEI TCCGGA 1 cut(s) 589
BspFNI CGCG 2 cut(s) 1590, 1952
BspLI GGNNCC 4 cut(s) 235, 324, 1124, 1513
BspMAI CTGCAG 2 cut(s) 745, 1866
BspMI ACCTGC 1 cut(s) 587
BspPI GGATC 1 cut(s) 727
BspT107I GGYRCC 1 cut(s) 322
BsrBI CCGCTC 1 cut(s) 1178
BsrDI GCAATG 1 cut(s) 57
BsrFI RCCGGY 1 cut(s) 1965
BsrI ACTGG 2 cut(s) 164, 1124
BssAI RCCGGY 1 cut(s) 1965
BssECI CCNNGG 4 cut(s) 108, 1193, 1224, 1704
BssT1I CCWWGG 3 cut(s) 108, 1193, 1224
Bst2UI CCWGG 2 cut(s) 266, 425
Bst4CI ACNGT 4 cut(s) 13, 238, 982, 2058
BstC8I GCNNGC 9 cut(s) 135, 207, 1142, 1269, 1423, 1759, 1843, 1847, 1851
BstDEI CTNAG 7 cut(s) 398, 858, 1081, 1136, 1710, 1983, 1991
BstDSI CCRYGG 1 cut(s) 108
BstF5I GGATG 7 cut(s) 138, 144, 801, 1045, 1351, 1750, 1788
BstFNI CGCG 2 cut(s) 1590, 1952
BstH2I RGCGCY 1 cut(s) 732
BstHHI GCGC 1 cut(s) 731
BstMAI GTCTC 3 cut(s) 244, 1259, 1686
BstMWI GCNNNNNNNGC 6 cut(s) 134, 320, 737, 1141, 1754, 1993
BstNI CCWGG 2 cut(s) 266, 425
BstNSI RCATGY 1 cut(s) 1845
BstPAI GACNNNNGTC 1 cut(s) 597
BstSCI CCNGG 3 cut(s) 264, 423, 1124
BstSFI CTRYAG 3 cut(s) 741, 1158, 1862
BstSLI GKGCMC 2 cut(s) 325, 1652
BstUI CGCG 2 cut(s) 1590, 1952
BstV1I GCAGC 7 cut(s) 727, 1371, 1393, 1647, 1755, 1995, 1999
BstV2I GAAGAC 2 cut(s) 276, 1406
BstX2I RGATCY 3 cut(s) 719, 1162, 1555
BstYI RGATCY 3 cut(s) 719, 1162, 1555
Bsu15I ATCGAT 1 cut(s) 1327
BsuRI GGCC 6 cut(s) 1267, 1421, 1514, 1757, 1955, 2076
BsuTUI ATCGAT 1 cut(s) 1327
BtgI CCRYGG 1 cut(s) 108
BtsCI GGATG 7 cut(s) 138, 144, 801, 1045, 1351, 1750, 1788
BtsIMutI CAGTG 1 cut(s) 1967
BveI ACCTGC 1 cut(s) 587
Cac8I GCNNGC 9 cut(s) 135, 207, 1142, 1269, 1423, 1759, 1843, 1847, 1851
CfoI GCGC 1 cut(s) 731
Cfr10I RCCGGY 1 cut(s) 1965
Cfr13I GGNCC 5 cut(s) 350, 599, 1122, 1512, 2074
ClaI ATCGAT 1 cut(s) 1327
CseI GACGC 1 cut(s) 602
DdeI CTNAG 7 cut(s) 398, 858, 1081, 1136, 1710, 1983, 1991
EaeI YGGCCR 1 cut(s) 1953
Ecl136II GAGCTC 1 cut(s) 883
Eco130I CCWWGG 3 cut(s) 108, 1193, 1224
Eco147I AGGCCT 1 cut(s) 1757
Eco24I GRGCYC 1 cut(s) 885
Eco47I GGWCC 3 cut(s) 350, 599, 1122
Eco53kI GAGCTC 1 cut(s) 883
Eco88I CYCGRG 2 cut(s) 869, 884
EcoICRI GAGCTC 1 cut(s) 883
EcoRI GAATTC 1 cut(s) 951
EcoRII CCWGG 2 cut(s) 264, 423
EcoT14I CCWWGG 3 cut(s) 108, 1193, 1224
EcoT22I ATGCAT 1 cut(s) 1843
EcoT38I GRGCYC 1 cut(s) 885
ErhI CCWWGG 3 cut(s) 108, 1193, 1224
Esp3I CGTCTC 1 cut(s) 244
FalI AAGNNNNNCTT 2 cut(s) 742, 774
FaqI GGGAC 2 cut(s) 1852, 1896
FbaI TGATCA 2 cut(s) 1008, 1522
FokI GGATG 7 cut(s) 125, 131, 788, 1052, 1358, 1757, 1775
FriOI GRGCYC 1 cut(s) 885
FspBI CTAG 7 cut(s) 465, 612, 723, 995, 1316, 1388, 1484
GlaI GCGC 1 cut(s) 730
GsuI CTGGAG 2 cut(s) 181, 241
HaeII RGCGCY 1 cut(s) 732
HaeIII GGCC 6 cut(s) 1267, 1421, 1514, 1757, 1955, 2076
HapII CCGG 3 cut(s) 590, 1126, 1966
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 731
Hin6I GCGC 1 cut(s) 729
HinP1I GCGC 1 cut(s) 729
HindIII AAGCTT 1 cut(s) 756
HinfI GANTC 5 cut(s) 224, 250, 272, 284, 572
HpaII CCGG 3 cut(s) 590, 1126, 1966
HphI GGTGA 4 cut(s) 293, 439, 799, 1654
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 8 cut(s) 191, 277, 603, 859, 1117, 1573, 1578, 2071
Hpy188III TCNNGA 7 cut(s) 85, 148, 353, 569, 590, 869, 1484
Hpy8I GTNNAC 1 cut(s) 292
Hpy99I CGWCG 1 cut(s) 1117
HpyAV CCTTC 9 cut(s) 40, 272, 820, 1009, 1336, 1443, 1663, 1801, 1802
HpyCH4III ACNGT 4 cut(s) 13, 238, 982, 2058
HpyF10VI GCNNNNNNNGC 6 cut(s) 134, 320, 737, 1141, 1754, 1993
HpyF3I CTNAG 7 cut(s) 398, 858, 1081, 1136, 1710, 1983, 1991
HspAI GCGC 1 cut(s) 729
Kpn2I TCCGGA 1 cut(s) 589
Ksp22I TGATCA 2 cut(s) 1008, 1522
LmnI GCTCC 4 cut(s) 97, 585, 688, 1070
Lsp1109I GCAGC 7 cut(s) 727, 1371, 1393, 1647, 1755, 1995, 1999
LweI GCATC 6 cut(s) 349, 727, 1539, 1735, 1755, 1828
MaeI CTAG 7 cut(s) 465, 612, 723, 995, 1316, 1388, 1484
MaeIII GTNAC 2 cut(s) 3, 1562
MbiI CCGCTC 1 cut(s) 1178
MboII GAAGA 7 cut(s) 22, 281, 323, 635, 832, 1375, 1411
MflI RGATCY 3 cut(s) 719, 1162, 1555
MhlI GDGCHC 5 cut(s) 325, 885, 1447, 1652, 1784
MlyI GAGTC 3 cut(s) 218, 266, 581
MmeI TCCRAC 4 cut(s) 211, 357, 1048, 1095
Mph1103I ATGCAT 1 cut(s) 1843
MroI TCCGGA 1 cut(s) 589
MroXI GAANNNNTTC 3 cut(s) 169, 671, 2058
MseI TTAA 3 cut(s) 749, 1506, 2048
MslI CAYNNNNRTG 2 cut(s) 699, 1034
MspA1I CMGCKG 2 cut(s) 221, 1384
MspI CCGG 3 cut(s) 590, 1126, 1966
MspR9I CCNGG 3 cut(s) 266, 425, 1126
Mva1269I GAATGC 2 cut(s) 169, 314
MvaI CCWGG 2 cut(s) 266, 425
MvnI CGCG 2 cut(s) 1590, 1952
MwoI GCNNNNNNNGC 6 cut(s) 134, 320, 737, 1141, 1754, 1993
NciI CCSGG 1 cut(s) 1126
NcoI CCATGG 1 cut(s) 108
NlaIV GGNNCC 4 cut(s) 235, 324, 1124, 1513
NmeAIII GCCGAG 1 cut(s) 1729
NsiI ATGCAT 1 cut(s) 1843
NspI RCATGY 1 cut(s) 1845
PaeI GCATGC 1 cut(s) 1845
PaeR7I CTCGAG 2 cut(s) 869, 884
PceI AGGCCT 1 cut(s) 1757
PctI GAATGC 2 cut(s) 169, 314
PdmI GAANNNNTTC 3 cut(s) 169, 671, 2058
PfeI GAWTC 2 cut(s) 250, 284
PleI GAGTC 3 cut(s) 218, 266, 580
PpsI GAGTC 3 cut(s) 218, 266, 580
PshAI GACNNNNGTC 1 cut(s) 597
PshBI ATTAAT 1 cut(s) 1506
PsiI TTATAA 5 cut(s) 308, 452, 515, 1304, 1919
Psp124BI GAGCTC 1 cut(s) 885
Psp6I CCWGG 2 cut(s) 264, 423
PspGI CCWGG 2 cut(s) 264, 423
PspN4I GGNNCC 4 cut(s) 235, 324, 1124, 1513
PspPI GGNCC 5 cut(s) 350, 599, 1122, 1512, 2074
PspXI VCTCGAGB 1 cut(s) 884
PstI CTGCAG 2 cut(s) 745, 1866
PsuI RGATCY 3 cut(s) 719, 1162, 1555
PvuII CAGCTG 2 cut(s) 221, 1384
RseI CAYNNNNRTG 2 cut(s) 699, 1034
SacI GAGCTC 1 cut(s) 885
SaqAI TTAA 3 cut(s) 749, 1506, 2048
Sau96I GGNCC 5 cut(s) 350, 599, 1122, 1512, 2074
SchI GAGTC 3 cut(s) 218, 266, 581
ScrFI CCNGG 3 cut(s) 266, 425, 1126
SduI GDGCHC 5 cut(s) 325, 885, 1447, 1652, 1784
SfaNI GCATC 6 cut(s) 349, 727, 1539, 1735, 1755, 1828
SfcI CTRYAG 3 cut(s) 741, 1158, 1862
Sfr274I CTCGAG 2 cut(s) 869, 884
SinI GGWCC 3 cut(s) 350, 599, 1122
SlaI CTCGAG 2 cut(s) 869, 884
SmiMI CAYNNNNRTG 2 cut(s) 699, 1034
SmlI CTYRAG 4 cut(s) 869, 884, 1466, 1871
SmoI CTYRAG 4 cut(s) 869, 884, 1466, 1871
SphI GCATGC 1 cut(s) 1845
SseBI AGGCCT 1 cut(s) 1757
SsiI CCGC 7 cut(s) 348, 366, 644, 784, 1178, 1588, 1952
SspMI CTAG 7 cut(s) 465, 612, 723, 995, 1316, 1388, 1484
SstI GAGCTC 1 cut(s) 885
StuI AGGCCT 1 cut(s) 1757
StyD4I CCNGG 3 cut(s) 264, 423, 1124
StyI CCWWGG 3 cut(s) 108, 1193, 1224
TaaI ACNGT 4 cut(s) 13, 238, 982, 2058
TaqI TCGA 9 cut(s) 103, 568, 870, 885, 1327, 1397, 1416, 1447, 1799
TauI GCSGC 3 cut(s) 787, 1181, 1955
TfiI GAWTC 2 cut(s) 250, 284
Tru1I TTAA 3 cut(s) 749, 1506, 2048
Tru9I TTAA 3 cut(s) 749, 1506, 2048
TscAI CASTG 1 cut(s) 1967
TseI GCWGC 7 cut(s) 740, 1381, 1384, 1660, 1768, 1987, 2008
TspDTI ATGAA 7 cut(s) 664, 886, 1046, 1173, 1273, 1503, 1645
TspGWI ACGGA 1 cut(s) 947
TspRI CASTG 1 cut(s) 1967
VpaK11BI GGWCC 3 cut(s) 350, 599, 1122
VspI ATTAAT 1 cut(s) 1506
XapI RAATTY 8 cut(s) 57, 478, 518, 951, 1085, 1366, 1517, 2064
XbaI TCTAGA 1 cut(s) 1483
XceI RCATGY 1 cut(s) 1845
XhoI CTCGAG 2 cut(s) 869, 884
XmnI GAANNNNTTC 3 cut(s) 169, 671, 2058
XspI CTAG 7 cut(s) 465, 612, 723, 995, 1316, 1388, 1484
Zsp2I ATGCAT 1 cut(s) 1843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.