Domain of unknown function (DUF4220)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 424 |
| Acc36I | ACCTGC | 2 cut(s) | 424, 1560 |
| AccB1I | GGYRCC | 1 cut(s) | 923 |
| AccBSI | CCGCTC | 1 cut(s) | 612 |
| AciI | CCGC | 3 cut(s) | 473, 610, 1664 |
| AclWI | GGATC | 5 cut(s) | 566, 650, 822, 1374, 1640 |
| AcsI | RAATTY | 6 cut(s) | 1258, 1282, 1358, 1676, 1746, 2019 |
| AcvI | CACGTG | 1 cut(s) | 1659 |
| AfaI | GTAC | 2 cut(s) | 1017, 1556 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 575, 665, 1569 |
| AflIII | ACRYGT | 2 cut(s) | 1656, 1658 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1570 |
| AhlI | ACTAGT | 1 cut(s) | 424 |
| AjnI | CCWGG | 3 cut(s) | 54, 467, 574 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 542, 574 |
| Alw21I | GWGCWC | 2 cut(s) | 259, 1742 |
| Alw26I | GTCTC | 2 cut(s) | 403, 1208 |
| Alw44I | GTGCAC | 1 cut(s) | 255 |
| AlwI | GGATC | 5 cut(s) | 566, 650, 822, 1374, 1640 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 831 |
| AoxI | GGCC | 4 cut(s) | 358, 577, 1289, 2029 |
| ApaLI | GTGCAC | 1 cut(s) | 255 |
| ApeKI | GCWGC | 3 cut(s) | 162, 374, 1907 |
| ApoI | RAATTY | 6 cut(s) | 1258, 1282, 1358, 1676, 1746, 2019 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1368, 1400, 1523, 1555 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 175, 605, 1410, 1749, 2013 |
| AspS9I | GGNCC | 4 cut(s) | 359, 578, 1243, 2029 |
| AsuC2I | CCSGG | 1 cut(s) | 362 |
| AsuHPI | GGTGA | 3 cut(s) | 1316, 1415, 1747 |
| AsuII | TTCGAA | 2 cut(s) | 1683, 2024 |
| AsuNHI | GCTAGC | 1 cut(s) | 1715 |
| AvaII | GGWCC | 1 cut(s) | 1243 |
| BaeGI | GKGCMC | 1 cut(s) | 259 |
| BanI | GGYRCC | 1 cut(s) | 923 |
| BanII | GRGCYC | 1 cut(s) | 334 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1259, 1291 |
| BbrPI | CACGTG | 1 cut(s) | 1659 |
| BbsI | GAAGAC | 3 cut(s) | 4, 396, 967 |
| Bbv12I | GWGCWC | 2 cut(s) | 259, 1742 |
| BbvI | GCAGC | 3 cut(s) | 174, 361, 1894 |
| BccI | CCATC | 2 cut(s) | 965, 1440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 228, 262 |
| BciT130I | CCWGG | 3 cut(s) | 56, 469, 576 |
| BclI | TGATCA | 2 cut(s) | 981, 1020 |
| BcnI | CCSGG | 1 cut(s) | 362 |
| BcoDI | GTCTC | 2 cut(s) | 403, 1208 |
| BcuI | ACTAGT | 1 cut(s) | 424 |
| BfaI | CTAG | 8 cut(s) | 264, 425, 494, 1055, 1601, 1716, 1964, 2037 |
| BfmI | CTRYAG | 3 cut(s) | 225, 297, 1276 |
| BfuAI | ACCTGC | 2 cut(s) | 424, 1560 |
| BglII | AGATCT | 2 cut(s) | 524, 1059 |
| BisI | GCNGC | 3 cut(s) | 163, 375, 1908 |
| BlsI | GCNGC | 3 cut(s) | 164, 376, 1909 |
| BmcAI | AGTACT | 1 cut(s) | 1556 |
| Bme1390I | CCNGG | 4 cut(s) | 56, 362, 469, 576 |
| Bme18I | GGWCC | 1 cut(s) | 1243 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1570 |
| BmgT120I | GGNCC | 4 cut(s) | 359, 578, 1243, 2029 |
| BmiI | GGNNCC | 5 cut(s) | 53, 333, 925, 1245, 1649 |
| BmrFI | CCNGG | 4 cut(s) | 56, 362, 469, 576 |
| BmrI | ACTGGG | 1 cut(s) | 241 |
| BmsI | GCATC | 3 cut(s) | 1279, 1786, 1884 |
| BmtI | GCTAGC | 1 cut(s) | 1719 |
| BmuI | ACTGGG | 1 cut(s) | 241 |
| BpiI | GAAGAC | 3 cut(s) | 4, 396, 967 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 596, 628, 1883, 1915 |
| Bpu14I | TTCGAA | 2 cut(s) | 1683, 2024 |
| BpuEI | CTTGAG | 1 cut(s) | 1715 |
| BpuMI | CCSGG | 1 cut(s) | 362 |
| BsaAI | YACGTR | 1 cut(s) | 1659 |
| BsaJI | CCNNGG | 2 cut(s) | 468, 1922 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1950, 1980 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 575, 665, 1569 |
| Bse1I | ACTGG | 4 cut(s) | 236, 1097, 1292, 1911 |
| Bse3DI | GCAATG | 1 cut(s) | 369 |
| BseBI | CCWGG | 3 cut(s) | 56, 469, 576 |
| BseDI | CCNNGG | 2 cut(s) | 468, 1922 |
| BseGI | GGATG | 3 cut(s) | 777, 1451, 1887 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 575, 665, 1569 |
| BseMI | GCAATG | 1 cut(s) | 369 |
| BseMII | CTCAG | 5 cut(s) | 208, 242, 512, 1100, 1960 |
| BseNI | ACTGG | 4 cut(s) | 236, 1097, 1292, 1911 |
| BseRI | GAGGAG | 2 cut(s) | 64, 1475 |
| BseSI | GKGCMC | 1 cut(s) | 259 |
| BseXI | GCAGC | 3 cut(s) | 174, 361, 1894 |
| BseYI | CCCAGC | 1 cut(s) | 1036 |
| BsgI | GTGCAG | 3 cut(s) | 80, 452, 1246 |
| BshFI | GGCC | 4 cut(s) | 360, 579, 1291, 2031 |
| BshNI | GGYRCC | 1 cut(s) | 923 |
| BsiHKAI | GWGCWC | 2 cut(s) | 259, 1742 |
| BsiSI | CCGG | 2 cut(s) | 362, 1754 |
| BslFI | GGGAC | 3 cut(s) | 287, 1229, 1596 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 575, 665, 1569 |
| BsmAI | GTCTC | 2 cut(s) | 403, 1208 |
| BsmFI | GGGAC | 3 cut(s) | 287, 1229, 1596 |
| BsmI | GAATGC | 5 cut(s) | 144, 175, 323, 730, 1476 |
| BsnI | GGCC | 4 cut(s) | 360, 579, 1291, 2031 |
| Bsp119I | TTCGAA | 2 cut(s) | 1683, 2024 |
| Bsp1286I | GDGCHC | 3 cut(s) | 259, 334, 1742 |
| Bsp19I | CCATGG | 1 cut(s) | 1922 |
| BspACI | CCGC | 3 cut(s) | 473, 610, 1664 |
| BspANI | GGCC | 4 cut(s) | 360, 579, 1291, 2031 |
| BspCNI | CTCAG | 5 cut(s) | 207, 243, 513, 1101, 1959 |
| BspLI | GGNNCC | 5 cut(s) | 53, 333, 925, 1245, 1649 |
| BspMAI | CTGCAG | 1 cut(s) | 229 |
| BspMI | ACCTGC | 2 cut(s) | 424, 1560 |
| BspOI | GCTAGC | 1 cut(s) | 1719 |
| BspPI | GGATC | 5 cut(s) | 566, 650, 822, 1374, 1640 |
| BspT104I | TTCGAA | 2 cut(s) | 1683, 2024 |
| BspT107I | GGYRCC | 1 cut(s) | 923 |
| BsrBI | CCGCTC | 1 cut(s) | 612 |
| BsrDI | GCAATG | 1 cut(s) | 369 |
| BsrI | ACTGG | 4 cut(s) | 236, 1097, 1292, 1911 |
| BssECI | CCNNGG | 2 cut(s) | 468, 1922 |
| BssT1I | CCWWGG | 1 cut(s) | 1922 |
| Bst2UI | CCWGG | 3 cut(s) | 56, 469, 576 |
| Bst4CI | ACNGT | 4 cut(s) | 118, 244, 1224, 1559 |
| Bst6I | CTCTTC | 2 cut(s) | 1296, 1452 |
| BstBAI | YACGTR | 1 cut(s) | 1659 |
| BstBI | TTCGAA | 2 cut(s) | 1683, 2024 |
| BstC8I | GCNNGC | 5 cut(s) | 532, 1717, 1801, 1805, 1935 |
| BstDEI | CTNAG | 7 cut(s) | 23, 194, 251, 461, 521, 1109, 1946 |
| BstDSI | CCRYGG | 1 cut(s) | 1922 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 573 |
| BstF5I | GGATG | 3 cut(s) | 777, 1451, 1887 |
| BstMAI | GTCTC | 2 cut(s) | 403, 1208 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 329, 951, 1939, 1948, 1969, 1978 |
| BstNI | CCWGG | 3 cut(s) | 56, 469, 576 |
| BstNSI | RCATGY | 4 cut(s) | 100, 1803, 1937, 2056 |
| BstSCI | CCNGG | 4 cut(s) | 54, 360, 467, 574 |
| BstSFI | CTRYAG | 3 cut(s) | 225, 297, 1276 |
| BstSLI | GKGCMC | 1 cut(s) | 259 |
| BstV1I | GCAGC | 3 cut(s) | 174, 361, 1894 |
| BstV2I | GAAGAC | 3 cut(s) | 4, 396, 967 |
| BstX2I | RGATCY | 5 cut(s) | 524, 655, 827, 1059, 1366 |
| BstYI | RGATCY | 5 cut(s) | 524, 655, 827, 1059, 1366 |
| BsuRI | GGCC | 4 cut(s) | 360, 579, 1291, 2031 |
| BtgI | CCRYGG | 1 cut(s) | 1922 |
| BtsCI | GGATG | 3 cut(s) | 777, 1451, 1887 |
| BtsI | GCAGTG | 1 cut(s) | 541 |
| BtsIMutI | CAGTG | 4 cut(s) | 114, 541, 1671, 1740 |
| BveI | ACCTGC | 2 cut(s) | 424, 1560 |
| Cac8I | GCNNGC | 5 cut(s) | 532, 1717, 1801, 1805, 1935 |
| CaiI | CAGNNNCTG | 1 cut(s) | 831 |
| Cfr13I | GGNCC | 4 cut(s) | 359, 578, 1243, 2029 |
| Csp6I | GTAC | 2 cut(s) | 1016, 1555 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1687, 1722 |
| CviQI | GTAC | 2 cut(s) | 1016, 1555 |
| DdeI | CTNAG | 7 cut(s) | 23, 194, 251, 461, 521, 1109, 1946 |
| DraI | TTTAAA | 1 cut(s) | 847 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1570 |
| Eam1104I | CTCTTC | 2 cut(s) | 1296, 1452 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1570 |
| EarI | CTCTTC | 2 cut(s) | 1296, 1452 |
| Eco130I | CCWWGG | 1 cut(s) | 1922 |
| Eco24I | GRGCYC | 1 cut(s) | 334 |
| Eco47I | GGWCC | 1 cut(s) | 1243 |
| Eco72I | CACGTG | 1 cut(s) | 1659 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 573 |
| EcoO109I | RGGNCCY | 2 cut(s) | 578, 1243 |
| EcoRI | GAATTC | 2 cut(s) | 1282, 1676 |
| EcoRII | CCWGG | 3 cut(s) | 54, 467, 574 |
| EcoT14I | CCWWGG | 1 cut(s) | 1922 |
| EcoT22I | ATGCAT | 1 cut(s) | 1801 |
| EcoT38I | GRGCYC | 1 cut(s) | 334 |
| ErhI | CCWWGG | 1 cut(s) | 1922 |
| FaqI | GGGAC | 3 cut(s) | 287, 1229, 1596 |
| FauI | CCCGC | 1 cut(s) | 466 |
| FbaI | TGATCA | 2 cut(s) | 981, 1020 |
| Fnu4HI | GCNGC | 3 cut(s) | 163, 375, 1908 |
| FokI | GGATG | 3 cut(s) | 764, 1458, 1894 |
| FriOI | GRGCYC | 1 cut(s) | 334 |
| Fsp4HI | GCNGC | 3 cut(s) | 163, 375, 1908 |
| FspBI | CTAG | 8 cut(s) | 264, 425, 494, 1055, 1601, 1716, 1964, 2037 |
| GluI | GCNGC | 3 cut(s) | 163, 375, 1908 |
| GsaI | CCCAGC | 1 cut(s) | 1040 |
| HaeIII | GGCC | 4 cut(s) | 360, 579, 1291, 2031 |
| HapII | CCGG | 2 cut(s) | 362, 1754 |
| HindIII | AAGCTT | 2 cut(s) | 840, 1815 |
| HinfI | GANTC | 5 cut(s) | 198, 551, 936, 1927, 2040 |
| HpaII | CCGG | 2 cut(s) | 362, 1754 |
| HphI | GGTGA | 3 cut(s) | 1316, 1415, 1747 |
| Hpy166II | GTNNAC | 4 cut(s) | 39, 257, 510, 539 |
| Hpy188I | TCNGA | 9 cut(s) | 197, 522, 1006, 1090, 1371, 1519, 1564, 1637, 1881 |
| Hpy188III | TCNNGA | 7 cut(s) | 820, 979, 1205, 1387, 1415, 1433, 1523 |
| Hpy8I | GTNNAC | 4 cut(s) | 39, 257, 510, 539 |
| HpyAV | CCTTC | 7 cut(s) | 356, 620, 686, 1227, 1303, 1624, 2020 |
| HpyCH4III | ACNGT | 4 cut(s) | 118, 244, 1224, 1559 |
| HpyCH4IV | ACGT | 1 cut(s) | 1658 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 329, 951, 1939, 1948, 1969, 1978 |
| HpyF3I | CTNAG | 7 cut(s) | 23, 194, 251, 461, 521, 1109, 1946 |
| HpySE526I | ACGT | 1 cut(s) | 1658 |
| Ksp22I | TGATCA | 2 cut(s) | 981, 1020 |
| LmnI | GCTCC | 5 cut(s) | 51, 93, 337, 1043, 1449 |
| Lsp1109I | GCAGC | 3 cut(s) | 174, 361, 1894 |
| LweI | GCATC | 3 cut(s) | 1279, 1786, 1884 |
| MaeI | CTAG | 8 cut(s) | 264, 425, 494, 1055, 1601, 1716, 1964, 2037 |
| MaeII | ACGT | 1 cut(s) | 1658 |
| MaeIII | GTNAC | 3 cut(s) | 112, 1709, 1966 |
| MbiI | CCGCTC | 1 cut(s) | 612 |
| MflI | RGATCY | 5 cut(s) | 524, 655, 827, 1059, 1366 |
| MhlI | GDGCHC | 3 cut(s) | 259, 334, 1742 |
| MlyI | GAGTC | 1 cut(s) | 2049 |
| MmeI | TCCRAC | 1 cut(s) | 1587 |
| Mph1103I | ATGCAT | 1 cut(s) | 1801 |
| MroXI | GAANNNNTTC | 5 cut(s) | 175, 605, 1410, 1749, 2013 |
| MseI | TTAA | 5 cut(s) | 486, 633, 846, 1190, 1545 |
| MslI | CAYNNNNRTG | 3 cut(s) | 354, 503, 1444 |
| MspI | CCGG | 2 cut(s) | 362, 1754 |
| MspR9I | CCNGG | 4 cut(s) | 56, 362, 469, 576 |
| Mva1269I | GAATGC | 5 cut(s) | 144, 175, 323, 730, 1476 |
| MvaI | CCWGG | 3 cut(s) | 56, 469, 576 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 329, 951, 1939, 1948, 1969, 1978 |
| NciI | CCSGG | 1 cut(s) | 362 |
| NcoI | CCATGG | 1 cut(s) | 1922 |
| NheI | GCTAGC | 1 cut(s) | 1715 |
| NlaIV | GGNNCC | 5 cut(s) | 53, 333, 925, 1245, 1649 |
| NmeAIII | GCCGAG | 1 cut(s) | 1918 |
| NmuCI | GTSAC | 2 cut(s) | 112, 1966 |
| NsiI | ATGCAT | 1 cut(s) | 1801 |
| NspI | RCATGY | 4 cut(s) | 100, 1803, 1937, 2056 |
| NspV | TTCGAA | 2 cut(s) | 1683, 2024 |
| PaeI | GCATGC | 2 cut(s) | 1803, 1937 |
| PaqCI | CACCTGC | 1 cut(s) | 424 |
| PctI | GAATGC | 5 cut(s) | 144, 175, 323, 730, 1476 |
| PdmI | GAANNNNTTC | 5 cut(s) | 175, 605, 1410, 1749, 2013 |
| PfeI | GAWTC | 4 cut(s) | 198, 551, 936, 1927 |
| PkrI | GCNGC | 3 cut(s) | 164, 376, 1909 |
| PleI | GAGTC | 1 cut(s) | 2048 |
| PmaCI | CACGTG | 1 cut(s) | 1659 |
| PmlI | CACGTG | 1 cut(s) | 1659 |
| PpsI | GAGTC | 1 cut(s) | 2048 |
| Ppu21I | YACGTR | 1 cut(s) | 1659 |
| PpuMI | RGGWCCY | 1 cut(s) | 1243 |
| Psp5II | RGGWCCY | 1 cut(s) | 1243 |
| Psp6I | CCWGG | 3 cut(s) | 54, 467, 574 |
| PspCI | CACGTG | 1 cut(s) | 1659 |
| PspFI | CCCAGC | 1 cut(s) | 1036 |
| PspGI | CCWGG | 3 cut(s) | 54, 467, 574 |
| PspN4I | GGNNCC | 5 cut(s) | 53, 333, 925, 1245, 1649 |
| PspPI | GGNCC | 4 cut(s) | 359, 578, 1243, 2029 |
| PspPPI | RGGWCCY | 1 cut(s) | 1243 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 999, 1031 |
| PstI | CTGCAG | 1 cut(s) | 229 |
| PstNI | CAGNNNCTG | 1 cut(s) | 831 |
| PsuI | RGATCY | 5 cut(s) | 524, 655, 827, 1059, 1366 |
| RsaI | GTAC | 2 cut(s) | 1017, 1556 |
| RsaNI | GTAC | 2 cut(s) | 1016, 1555 |
| RseI | CAYNNNNRTG | 3 cut(s) | 354, 503, 1444 |
| SaqAI | TTAA | 5 cut(s) | 486, 633, 846, 1190, 1545 |
| SatI | GCNGC | 3 cut(s) | 163, 375, 1908 |
| Sau96I | GGNCC | 4 cut(s) | 359, 578, 1243, 2029 |
| ScaI | AGTACT | 1 cut(s) | 1556 |
| SchI | GAGTC | 1 cut(s) | 2049 |
| ScrFI | CCNGG | 4 cut(s) | 56, 362, 469, 576 |
| SduI | GDGCHC | 3 cut(s) | 259, 334, 1742 |
| SfaNI | GCATC | 3 cut(s) | 1279, 1786, 1884 |
| SfcI | CTRYAG | 3 cut(s) | 225, 297, 1276 |
| SfuI | TTCGAA | 2 cut(s) | 1683, 2024 |
| SinI | GGWCC | 1 cut(s) | 1243 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 354, 503, 1444 |
| SmlI | CTYRAG | 1 cut(s) | 1730 |
| SmoI | CTYRAG | 1 cut(s) | 1730 |
| SpeI | ACTAGT | 1 cut(s) | 424 |
| SphI | GCATGC | 2 cut(s) | 1803, 1937 |
| SsiI | CCGC | 3 cut(s) | 473, 610, 1664 |
| SspI | AATATT | 1 cut(s) | 751 |
| SspMI | CTAG | 8 cut(s) | 264, 425, 494, 1055, 1601, 1716, 1964, 2037 |
| StyD4I | CCNGG | 4 cut(s) | 54, 360, 467, 574 |
| StyI | CCWWGG | 1 cut(s) | 1922 |
| TaaI | ACNGT | 4 cut(s) | 118, 244, 1224, 1559 |
| TaiI | ACGT | 1 cut(s) | 1661 |
| TaqI | TCGA | 9 cut(s) | 639, 934, 1206, 1362, 1467, 1524, 1683, 2024, 2043 |
| TatI | WGTACW | 2 cut(s) | 1015, 1554 |
| TfiI | GAWTC | 4 cut(s) | 198, 551, 936, 1927 |
| Tru1I | TTAA | 5 cut(s) | 486, 633, 846, 1190, 1545 |
| Tru9I | TTAA | 5 cut(s) | 486, 633, 846, 1190, 1545 |
| TscAI | CASTG | 4 cut(s) | 121, 541, 1678, 1747 |
| TseFI | GTSAC | 2 cut(s) | 112, 1966 |
| TseI | GCWGC | 3 cut(s) | 162, 374, 1907 |
| Tsp45I | GTSAC | 2 cut(s) | 112, 1966 |
| TspDTI | ATGAA | 8 cut(s) | 190, 338, 614, 852, 928, 1122, 1131, 1606 |
| TspGWI | ACGGA | 1 cut(s) | 98 |
| TspRI | CASTG | 4 cut(s) | 121, 541, 1678, 1747 |
| VneI | GTGCAC | 1 cut(s) | 255 |
| VpaK11BI | GGWCC | 1 cut(s) | 1243 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 573 |
| XapI | RAATTY | 6 cut(s) | 1258, 1282, 1358, 1676, 1746, 2019 |
| XceI | RCATGY | 4 cut(s) | 100, 1803, 1937, 2056 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 510 |
| XmnI | GAANNNNTTC | 5 cut(s) | 175, 605, 1410, 1749, 2013 |
| XspI | CTAG | 8 cut(s) | 264, 425, 494, 1055, 1601, 1716, 1964, 2037 |
| ZrmI | AGTACT | 1 cut(s) | 1556 |
| Zsp2I | ATGCAT | 1 cut(s) | 1801 |