Rh5AG437800

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000618
Physical Location & Seq
Reverse (-)
75213265 .. 75215167
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG437800.1

Sequence Viewer

Length: 1903 bp
ATGGCCTACTTATCGGCAGATTGGTTCGCTACCGTCGCGCTTGGAATGATCTCCACCTTCCAAGGAGATTATCAGCAGAAATCACCTACTCCAAACAGCGCTCAAGGAAGCTCCTCAAATCCAAACAGCCCGGCGATCATGGCGTTTTGGGCTCCGTTTCTTCTGGTGCACCTTGGTGGCCCGGACACCATTACTGCTTACTCGTTGGAGGACAACGAGCTGTGGCTAAGGCACCTTTTGGGTTTACTTGTTCAGGTTAGTGCCGCTTTGTACATCTTTCTAAGATCATGGACTACAAGGTCCTTACCCCTCGCTCTGCTAGCAATACCAATGTTTGTTGTTGGAATCATCAAATATGGAGAGCGGACTTGGGCCCTCTGGTCTGCTAGCAGTGAGAGACTTAGGATATCTCTGCCTCCTATTACTGCAGCTCTGACTCCCTTTAAAAATGAGAATCATGAGAGTAGTGGTCGTGTTAGACTAAACTATGCTGCTGCTATTCGTAAAGCCACACATATCCAAGAAGGTCATGCGTTATTCAAGTTGTTCAGGCATTTTTACACAGATCAGATCATTGAACAAAAGGATGTTCAACTTTCTAATACTATAATTCAGGACCATTCATTCGGAGATGTCTTCAAGCTAATTGAGATTGAGATTGGTTTTATGTATGATGTGCTGCATACCAAGGCAATCGTAGTGCATTCTCTCACGGGGTTCATGTTCCGAGCCATCTCCCTGGTTTGCTACATTTCTACATTTACGCTCTTTTGTTTTATCATTGATAAGAAGATTTATTCAACCATTGATGTACATTTGACTTACTTTTTGTGTGCTGGAGCAATTGCACTTGAGATATATGCCATCTTTGTACAAGTTTCTACAGATTGGGCATTGTACTGGTTAAGCAAGCAAGAGCAACCGCTGGCATATACCATCTACCAAGCAATCTCTTCATTTCGATCAAATCTGAGCCTTCAAAAGAGGTGGTCTGAATCCATGGGCCAATTCAATGTAATAGACTTTTGTTTCAAATTGAAACCGCCGAAGTGCACTGGAATTCCTAGGTTCCTGGCTATCTACAAAATGTATTCTAAACATCAGCACACGGTTTTGGAGGGCGTACCTATCAAAATGAAACAACTTATCTTTGAGCAACTTCAAGAAGCTAAGCTAGTTATTGATAATGCAGACCAGAATTCCAAATTTCAAGTACGCAGTCAAGTCTTGACTTGGAGAGGTGGACATGCGGCAGAAAAGAGTGGGTGTACTGACATATATATCAAACATTGTGCCGCGAATGAAGTACCGTTTGAAACCAGCATTGCTTTGTGGCATGTAGCAACAGATATATGCTTCTATAATGATGTTGACAAAAATCAAAAGGCCTCTGATCCTAATTCCAAATCCAAGGTGAGCAAGTTACTGTCAGATTATATGATGTATATTCTTGCCATCTGCCCTTTCATGTTGCCCCAAGGGATTGGACAGATTTTGTTTCGACAAATATGTGAGTCTGCCACAACATTTTTTGATGAGAGAAGGGAAACCATAAGTAAGACAGAGCGATTGGTTGGAAAAAGCGCCAGTCAGGTGTTGTACGAGATGAAGTCAGAGTTGAATCCATGGCTAGATGAGTTTGAGTCCGGAGATGGAGGAAAACTAAACAATGTAGTGTTGCTTGAGGGGTGTGTGCTTGCACATAAGTTGCAAGCCCTGGAAACGGAGGAGAGCTGGACTAATGAAGATAAATGGGGAATGATAAGTCGAGTGTGGATTGAAATGTTGTGTTATGCAGCAAGCCAATGTGGATGGACGGAGCACGGTCAACAACTTAGGCGTGGCGGGGAGCTTCTTACTCATGTCTCCCTTCTCATGGCAAATCTTGGTATCGGTGGACAGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

634

Amino Acids

71.84

Weight (kDa)

6.66

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 2 - 342 7.4e-92 Domain of unknown function (DUF4220)
DUF594 PF04578 579 - 631 2.7e-21 Protein of unknown function, DUF594
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 298
AccB1I GGYRCC 1 cut(s) 231
AccBSI CCGCTC 1 cut(s) 364
AccII CGCG 2 cut(s) 38, 1298
AccIII TCCGGA 1 cut(s) 1646
AciI CCGC 7 cut(s) 264, 364, 923, 1043, 1250, 1296, 1845
AclWI GGATC 1 cut(s) 1388
AcsI RAATTY 3 cut(s) 1059, 1198, 1205
AfaI GTAC 9 cut(s) 272, 813, 873, 899, 1125, 1215, 1270, 1308, 1601
AfeI AGCGCT 1 cut(s) 100
AfiI CCNNNNNNNGG 2 cut(s) 1723, 1876
AjnI CCWGG 3 cut(s) 738, 1071, 1716
AleI CACNNNNGTG 1 cut(s) 174
AluBI AGCT 8 cut(s) 111, 220, 431, 643, 1169, 1174, 1734, 1852
AluI AGCT 8 cut(s) 111, 220, 431, 643, 1169, 1174, 1734, 1852
Alw21I GWGCWC 3 cut(s) 171, 1055, 1824
Alw26I GTCTC 2 cut(s) 391, 1870
Alw44I GTGCAC 2 cut(s) 167, 1051
AlwI GGATC 1 cut(s) 1388
Aor13HI TCCGGA 1 cut(s) 1646
Aor51HI AGCGCT 1 cut(s) 100
AoxI GGCC 5 cut(s) 3, 178, 372, 1003, 1386
ApaI GGGCCC 1 cut(s) 376
ApaLI GTGCAC 2 cut(s) 167, 1051
ApeKI GCWGC 5 cut(s) 428, 491, 494, 679, 1796
ApoI RAATTY 3 cut(s) 1059, 1198, 1205
ArsI GACNNNNNNTTYG 4 cut(s) 608, 640, 811, 843
AspA2I CCTAGG 1 cut(s) 1064
AspLEI GCGC 3 cut(s) 40, 101, 1586
AspS9I GGNCC 6 cut(s) 179, 300, 372, 373, 616, 1003
AsuC2I CCSGG 2 cut(s) 131, 182
AsuHPI GGTGA 2 cut(s) 75, 1426
AsuNHI GCTAGC 2 cut(s) 319, 386
AvaII GGWCC 2 cut(s) 300, 616
AvrII CCTAGG 1 cut(s) 1064
BaeGI GKGCMC 3 cut(s) 171, 376, 1055
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 2 cut(s) 154, 376
BbsI GAAGAC 1 cut(s) 628
Bbv12I GWGCWC 3 cut(s) 171, 1055, 1824
BbvI GCAGC 5 cut(s) 440, 478, 481, 666, 1808
BccI CCATC 6 cut(s) 740, 872, 944, 1463, 1646, 1806
BciT130I CCWGG 3 cut(s) 740, 1073, 1718
BcnI CCSGG 2 cut(s) 131, 182
BcoDI GTCTC 2 cut(s) 391, 1870
BfaI CTAG 5 cut(s) 320, 387, 1065, 1175, 1631
BfmI CTRYAG 2 cut(s) 426, 882
BfoI RGCGCY 2 cut(s) 102, 1587
BisI GCNGC 8 cut(s) 264, 429, 492, 495, 680, 1251, 1296, 1797
BlnI CCTAGG 1 cut(s) 1064
BlpI GCTNAGC 1 cut(s) 1170
BlsI GCNGC 8 cut(s) 265, 430, 493, 496, 681, 1252, 1297, 1798
Bme1390I CCNGG 5 cut(s) 131, 182, 740, 1073, 1718
Bme18I GGWCC 2 cut(s) 300, 616
BmgT120I GGNCC 6 cut(s) 179, 300, 372, 373, 616, 1003
BmiI GGNNCC 4 cut(s) 153, 233, 374, 1070
BmrFI CCNGG 5 cut(s) 131, 182, 740, 1073, 1718
BmtI GCTAGC 2 cut(s) 323, 390
BpiI GAAGAC 1 cut(s) 628
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 1 cut(s) 227
Bpu1102I GCTNAGC 1 cut(s) 1170
BpuEI CTTGAG 3 cut(s) 87, 872, 1703
BpuMI CCSGG 2 cut(s) 131, 182
BsaWI WCCGGW 1 cut(s) 1646
Bsc4I CCNNNNNNNGG 2 cut(s) 1723, 1876
Bse1I ACTGG 3 cut(s) 905, 1060, 1587
Bse3DI GCAATG 1 cut(s) 1323
BseAI TCCGGA 1 cut(s) 1646
BseBI CCWGG 3 cut(s) 740, 1073, 1718
BseGI GGATG 2 cut(s) 592, 1817
BseLI CCNNNNNNNGG 2 cut(s) 1723, 1876
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 1 cut(s) 962
BseNI ACTGG 3 cut(s) 905, 1060, 1587
BseRI GAGGAG 2 cut(s) 103, 1742
BseSI GKGCMC 3 cut(s) 171, 376, 1055
BseXI GCAGC 5 cut(s) 440, 478, 481, 666, 1808
Bsh1236I CGCG 2 cut(s) 38, 1298
BshFI GGCC 5 cut(s) 5, 180, 374, 1005, 1388
BshNI GGYRCC 1 cut(s) 231
BsiHKAI GWGCWC 3 cut(s) 171, 1055, 1824
BsiSI CCGG 3 cut(s) 131, 182, 1647
BslI CCNNNNNNNGG 2 cut(s) 1723, 1876
BsmAI GTCTC 2 cut(s) 391, 1870
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 5 cut(s) 5, 180, 374, 1005, 1388
Bsp120I GGGCCC 1 cut(s) 372
Bsp1286I GDGCHC 5 cut(s) 154, 171, 376, 1055, 1824
Bsp13I TCCGGA 1 cut(s) 1646
Bsp1407I TGTACA 3 cut(s) 270, 811, 871
Bsp143I GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
Bsp1720I GCTNAGC 1 cut(s) 1170
Bsp19I CCATGG 2 cut(s) 999, 1625
BspACI CCGC 7 cut(s) 264, 364, 923, 1043, 1250, 1296, 1845
BspANI GGCC 5 cut(s) 5, 180, 374, 1005, 1388
BspCNI CTCAG 1 cut(s) 963
BspEI TCCGGA 1 cut(s) 1646
BspFNI CGCG 2 cut(s) 38, 1298
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 4 cut(s) 153, 233, 374, 1070
BspMAI CTGCAG 1 cut(s) 430
BspOI GCTAGC 2 cut(s) 323, 390
BspPI GGATC 1 cut(s) 1388
BspT107I GGYRCC 1 cut(s) 231
BsrBI CCGCTC 1 cut(s) 364
BsrDI GCAATG 1 cut(s) 1323
BsrGI TGTACA 3 cut(s) 270, 811, 871
BsrI ACTGG 3 cut(s) 905, 1060, 1587
BssMI GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
BssT1I CCWWGG 8 cut(s) 61, 172, 687, 999, 1064, 1410, 1477, 1625
Bst2UI CCWGG 3 cut(s) 740, 1073, 1718
Bst4CI ACNGT 5 cut(s) 34, 1111, 1311, 1428, 1826
Bst6I CTCTTC 1 cut(s) 958
BstAUI TGTACA 3 cut(s) 270, 811, 871
BstC8I GCNNGC 7 cut(s) 321, 388, 911, 927, 1698, 1713, 1801
BstDEI CTNAG 6 cut(s) 227, 281, 401, 971, 1170, 1835
BstDSI CCRYGG 2 cut(s) 999, 1625
BstF5I GGATG 2 cut(s) 592, 1817
BstFNI CGCG 2 cut(s) 38, 1298
BstH2I RGCGCY 2 cut(s) 102, 1587
BstHHI GCGC 3 cut(s) 40, 101, 1586
BstKTI GATC 7 cut(s) 51, 138, 287, 568, 573, 965, 1396
BstMAI GTCTC 2 cut(s) 391, 1870
BstMBI GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
BstMWI GCNNNNNNNGC 4 cut(s) 35, 140, 149, 320
BstNI CCWGG 3 cut(s) 740, 1073, 1718
BstNSI RCATGY 2 cut(s) 1250, 1340
BstSCI CCNGG 5 cut(s) 129, 180, 738, 1071, 1716
BstSFI CTRYAG 2 cut(s) 426, 882
BstSLI GKGCMC 3 cut(s) 171, 376, 1055
BstUI CGCG 2 cut(s) 38, 1298
BstV1I GCAGC 5 cut(s) 440, 478, 481, 666, 1808
BstV2I GAAGAC 1 cut(s) 628
BstXI CCANNNNNNTGG 2 cut(s) 739, 1484
BsuRI GGCC 5 cut(s) 5, 180, 374, 1005, 1388
BtgI CCRYGG 2 cut(s) 999, 1625
BtsCI GGATG 2 cut(s) 592, 1817
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 2 cut(s) 397, 1053
Cac8I GCNNGC 7 cut(s) 321, 388, 911, 927, 1698, 1713, 1801
CciI TCATGA 1 cut(s) 457
CfoI GCGC 3 cut(s) 40, 101, 1586
Cfr13I GGNCC 6 cut(s) 179, 300, 372, 373, 616, 1003
Csp6I GTAC 9 cut(s) 271, 812, 872, 898, 1124, 1214, 1269, 1307, 1600
CspCI CAANNNNNGTGG 2 cut(s) 968, 1003
CviQI GTAC 9 cut(s) 271, 812, 872, 898, 1124, 1214, 1269, 1307, 1600
DdeI CTNAG 6 cut(s) 227, 281, 401, 971, 1170, 1835
DpnI GATC 7 cut(s) 50, 137, 286, 567, 572, 964, 1395
DpnII GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
DraI TTTAAA 1 cut(s) 445
DrdI GACNNNNNNGTC 1 cut(s) 298
DseDI GACNNNNNNGTC 1 cut(s) 298
Eam1104I CTCTTC 1 cut(s) 958
EarI CTCTTC 1 cut(s) 958
Eco130I CCWWGG 8 cut(s) 61, 172, 687, 999, 1064, 1410, 1477, 1625
Eco147I AGGCCT 1 cut(s) 1388
Eco24I GRGCYC 2 cut(s) 154, 376
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 2 cut(s) 300, 616
Eco47III AGCGCT 1 cut(s) 100
EcoO109I RGGNCCY 2 cut(s) 300, 373
EcoRI GAATTC 2 cut(s) 1059, 1198
EcoRII CCWGG 3 cut(s) 738, 1071, 1716
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 8 cut(s) 61, 172, 687, 999, 1064, 1410, 1477, 1625
EcoT38I GRGCYC 2 cut(s) 154, 376
ErhI CCWWGG 8 cut(s) 61, 172, 687, 999, 1064, 1410, 1477, 1625
FauI CCCGC 1 cut(s) 1838
Fnu4HI GCNGC 8 cut(s) 264, 429, 492, 495, 680, 1251, 1296, 1797
FokI GGATG 2 cut(s) 599, 1824
FriOI GRGCYC 2 cut(s) 154, 376
Fsp4HI GCNGC 8 cut(s) 264, 429, 492, 495, 680, 1251, 1296, 1797
FspBI CTAG 5 cut(s) 320, 387, 1065, 1175, 1631
GlaI GCGC 3 cut(s) 39, 100, 1585
GluI GCNGC 8 cut(s) 264, 429, 492, 495, 680, 1251, 1296, 1797
GsuI CTGGAG 1 cut(s) 858
HaeII RGCGCY 2 cut(s) 102, 1587
HaeIII GGCC 5 cut(s) 5, 180, 374, 1005, 1388
HapII CCGG 3 cut(s) 131, 182, 1647
HhaI GCGC 3 cut(s) 40, 101, 1586
Hin6I GCGC 3 cut(s) 38, 99, 1584
HinP1I GCGC 3 cut(s) 38, 99, 1584
HincII GTYRAC 2 cut(s) 1372, 1829
HindII GTYRAC 2 cut(s) 1372, 1829
HinfI GANTC 7 cut(s) 345, 436, 454, 995, 1514, 1621, 1643
HpaII CCGG 3 cut(s) 131, 182, 1647
HphI GGTGA 2 cut(s) 75, 1426
Hpy166II GTNNAC 8 cut(s) 169, 245, 1053, 1244, 1269, 1372, 1829, 1898
Hpy188I TCNGA 9 cut(s) 435, 570, 629, 728, 972, 994, 1393, 1432, 1615
Hpy188III TCNNGA 5 cut(s) 458, 614, 1163, 1228, 1647
Hpy8I GTNNAC 8 cut(s) 169, 245, 1053, 1244, 1269, 1372, 1829, 1898
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 5 cut(s) 67, 518, 986, 1536, 1880
HpyCH4III ACNGT 5 cut(s) 34, 1111, 1311, 1428, 1826
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 140, 149, 320
HpyF3I CTNAG 6 cut(s) 227, 281, 401, 971, 1170, 1835
HspAI GCGC 3 cut(s) 38, 99, 1584
Kpn2I TCCGGA 1 cut(s) 1646
Kzo9I GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
LmnI GCTCC 5 cut(s) 116, 157, 839, 1819, 1849
Lsp1109I GCAGC 5 cut(s) 440, 478, 481, 666, 1808
MaeI CTAG 5 cut(s) 320, 387, 1065, 1175, 1631
MaeIII GTNAC 1 cut(s) 1422
MalI GATC 7 cut(s) 50, 137, 286, 567, 572, 964, 1395
MbiI CCGCTC 1 cut(s) 364
MboI GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
MboII GAAGA 5 cut(s) 152, 628, 802, 945, 1757
MfeI CAATTG 1 cut(s) 843
MhlI GDGCHC 5 cut(s) 154, 171, 376, 1055, 1824
MluCI AATT 9 cut(s) 609, 645, 843, 1007, 1034, 1059, 1198, 1205, 1399
MlyI GAGTC 3 cut(s) 430, 1523, 1652
MmeI TCCRAC 3 cut(s) 186, 322, 1555
MroI TCCGGA 1 cut(s) 1646
MseI TTAA 2 cut(s) 444, 905
MslI CAYNNNNRTG 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 925
MspI CCGG 3 cut(s) 131, 182, 1647
MspR9I CCNGG 5 cut(s) 131, 182, 740, 1073, 1718
MunI CAATTG 1 cut(s) 843
Mva1269I GAATGC 1 cut(s) 703
MvaI CCWGG 3 cut(s) 740, 1073, 1718
MvnI CGCG 2 cut(s) 38, 1298
MwoI GCNNNNNNNGC 4 cut(s) 35, 140, 149, 320
NciI CCSGG 2 cut(s) 131, 182
NcoI CCATGG 2 cut(s) 999, 1625
NdeII GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
NheI GCTAGC 2 cut(s) 319, 386
NlaIV GGNNCC 4 cut(s) 153, 233, 374, 1070
NspI RCATGY 2 cut(s) 1250, 1340
OliI CACNNNNGTG 1 cut(s) 174
PagI TCATGA 1 cut(s) 457
PceI AGGCCT 1 cut(s) 1388
PctI GAATGC 1 cut(s) 703
PfeI GAWTC 4 cut(s) 345, 454, 995, 1621
PkrI GCNGC 8 cut(s) 265, 430, 493, 496, 681, 1252, 1297, 1798
PleI GAGTC 3 cut(s) 430, 1522, 1651
PpsI GAGTC 3 cut(s) 430, 1522, 1651
PpuMI RGGWCCY 1 cut(s) 300
Psp5II RGGWCCY 1 cut(s) 300
Psp6I CCWGG 3 cut(s) 738, 1071, 1716
PspGI CCWGG 3 cut(s) 738, 1071, 1716
PspN4I GGNNCC 4 cut(s) 153, 233, 374, 1070
PspOMI GGGCCC 1 cut(s) 372
PspPI GGNCC 6 cut(s) 179, 300, 372, 373, 616, 1003
PspPPI RGGWCCY 1 cut(s) 300
PstI CTGCAG 1 cut(s) 430
RsaI GTAC 9 cut(s) 272, 813, 873, 899, 1125, 1215, 1270, 1308, 1601
RsaNI GTAC 9 cut(s) 271, 812, 872, 898, 1124, 1214, 1269, 1307, 1600
RseI CAYNNNNRTG 1 cut(s) 174
SaqAI TTAA 2 cut(s) 444, 905
SatI GCNGC 8 cut(s) 264, 429, 492, 495, 680, 1251, 1296, 1797
Sau3AI GATC 7 cut(s) 48, 135, 284, 565, 570, 962, 1393
Sau96I GGNCC 6 cut(s) 179, 300, 372, 373, 616, 1003
SchI GAGTC 3 cut(s) 430, 1523, 1652
ScrFI CCNGG 5 cut(s) 131, 182, 740, 1073, 1718
SduI GDGCHC 5 cut(s) 154, 171, 376, 1055, 1824
SfcI CTRYAG 2 cut(s) 426, 882
SinI GGWCC 2 cut(s) 300, 616
SmiMI CAYNNNNRTG 1 cut(s) 174
SmlI CTYRAG 3 cut(s) 102, 851, 1682
SmoI CTYRAG 3 cut(s) 102, 851, 1682
Sse9I AATT 9 cut(s) 609, 645, 843, 1007, 1034, 1059, 1198, 1205, 1399
SseBI AGGCCT 1 cut(s) 1388
SsiI CCGC 7 cut(s) 264, 364, 923, 1043, 1250, 1296, 1845
SspMI CTAG 5 cut(s) 320, 387, 1065, 1175, 1631
StuI AGGCCT 1 cut(s) 1388
StyD4I CCNGG 5 cut(s) 129, 180, 738, 1071, 1716
StyI CCWWGG 8 cut(s) 61, 172, 687, 999, 1064, 1410, 1477, 1625
TaaI ACNGT 5 cut(s) 34, 1111, 1311, 1428, 1826
TaqI TCGA 3 cut(s) 961, 1501, 1768
TasI AATT 9 cut(s) 609, 645, 843, 1007, 1034, 1059, 1198, 1205, 1399
TatI WGTACW 5 cut(s) 270, 811, 871, 897, 1268
TauI GCSGC 3 cut(s) 266, 1253, 1298
TfiI GAWTC 4 cut(s) 345, 454, 995, 1621
Tru1I TTAA 2 cut(s) 444, 905
Tru9I TTAA 2 cut(s) 444, 905
TscAI CASTG 2 cut(s) 397, 1060
TseI GCWGC 5 cut(s) 428, 491, 494, 679, 1796
TspDTI ATGAA 8 cut(s) 612, 709, 945, 1151, 1317, 1456, 1622, 1758
TspGWI ACGGA 3 cut(s) 144, 1739, 1832
TspRI CASTG 2 cut(s) 397, 1060
VneI GTGCAC 2 cut(s) 167, 1051
VpaK11BI GGWCC 2 cut(s) 300, 616
XapI RAATTY 3 cut(s) 1059, 1198, 1205
XceI RCATGY 2 cut(s) 1250, 1340
XmaJI CCTAGG 1 cut(s) 1064
XspI CTAG 5 cut(s) 320, 387, 1065, 1175, 1631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.