Prupe.3G040700_v2.0.a1

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000618
Physical Location & Seq
Forward (+)
2911439 .. 2914202
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G040700.1

Sequence Viewer

Length: 2004 bp
ATGCTAGTCACAATTATAAGCACCTTGCTCTTCACAAGGAGGAGGAAGGCAATGCAGCTTTTCCCAGAACGGGTGATCAAAATCTGGAGCCTGTGGGAGCTTCGTGTTGCAGTACTAATCAGCCTCGGCTTGCAAACCATCCTAATCCTGATTGGGAAATGGAGAAAGCATTCAACCAAAGACTACCTCAGAATTGTTTTGTGGCTCGCTTACTTGTTGGCTGAGTCAACTGCAACATTTTCACTCGGCGTACTCTCCAACAGCCAAGAAGACTCTCAAGGTGATTCTGTAAACCCAGACTATGTAATAACAGCATTTTGGGCACCCTTTCTTCTCTTGCATCTTGGTGGCCCAGATATTATTGCTGCTTATTCCTCAGAAGACAATGAGTTGTGGATGAGGCACTTGCTTAGGCTAGGTTCCCAGTTGCTTGTAGCTTCCAATGTCTTATTCAGAGCATGGTCTAGTGAAGCCTTGAATTTTTTGGCATTACCAATGTTCATAGTTGGGATTATAAAGTCTGGGGAGAGGACTTGGGTTTTAAGATCTGCAAGCAGTGAGCAATTTAGAGATTCTATGCTCCAAGATCCTGACCCCGGTCCGAATTATGATAGATACATGGAAGACTACAGTTCAAGGAGAGATGAGGGCTTCAGGGTGGAACTTGAAACATTCAGCGCATCCAAAGCTGCCACAGGTAGCGATCAATCACGCGAACCTGCAGCTGATGATGACAGTAGCCAAAATGATCCAATAAACAAAGCTTACACTTTCTTTGAAAGTTCAAAGAAGCTCTGTGCTGATCTCATCCTCAACTTCCATGATGTAGATAACAGCCAAAACTTCTTCCAAGCCACAAACTTTGAGAAAGCTTTTAAAGTTATTGAGATTGAGCTAGGTTTCATATATGATGTGTTTTATACTAAAGCAGTCCTCGTTTATTCTGGCCTTGGTGGCATTCTCCGTTGTATTACTTTTTTTTTAACAGTTTTAGTATTCCTAATTTTCCTTTTCACCGAGAAGCAAGCATACAGGGAAATGGATGTGATTATCACATATATTATGTTGGCAGGAGCTATCGTCCTAGAAATTTATGCTCTAATCATACTGCTTTCCTCAGACTGGACAAAGCTGTGGCTGAACAAGAACAAGAACACAAATACGGTGGCTTGTGTGGTGAACAAGAACAAGCACAAGAATGAGCACACAAATACGGTGGCTTGTGTGGTGGGTTTCTTGCATAAAACTGTTTCATACCTCCCATTGGTTAACAACAAGAGCTGGTCTAATTCCTTGGGACAATACAAGCTCATAAAATTTTGTCTTAAGACTAAGCCAGCTAAGTGCATTATTTTCAAGAAGGACTGTTATATAAATACGTATTTAGAGAAGCATCGGTACAAAAAGTACAGCAAAGTACCCATAGATTTCGTAAAGCAGTTGATATTTAAGCAGCTCCTAGAGAAATCAGCAACTGCCAAGAGTTTCAAGGATCGGAAAGAATTATGTGCTGGAAGGGGTGACAAGGTGCTCGACAAAAAAGGTCTAAAGATACTTGGCTGGACCATTAATGATGCTGAATTTGACCAGAGCATCCTTCTTTGGCATATTGCTACAGATCTATGCTACAATTCTGATCTCAATGAAGAAAACCAAAATTGTCAAACAAGGAAGAAATTGCCGAACAAAAATTGTCAAGCAAGTAGGCTATTGTCGAACTACATGTTGTACCTTTTAGTCATTTGCCCCTTCATGTTGCCAAATGGGATTGGAGAGATAAGGTATAGAGACACATGTTCTGAGGCTGAGGATTTTTTCACAGAAAGAAAATTGAAATCAGATGACAAAAATGCTCGCATAGAGCTCATGCAAGTGTGCACTGACCTCCTTCCAGCTGATGTGAAAGGTGACAAAAGCAAGTCAGTGCTATTTGATGCATATGCAGGCTCGCAAAAGATTTGCAAGCAAAGGAAAATTGGAATAAGGAGAAGAAGTGGGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

668

Amino Acids

76.43

Weight (kDa)

8.97

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 17, 515
Acc36I ACCTGC 1 cut(s) 727
AccB1I GGYRCC 1 cut(s) 322
AccII CGCG 1 cut(s) 714
AclWI GGATC 3 cut(s) 581, 743, 1500
AcsI RAATTY 4 cut(s) 478, 1089, 1316, 1580
AcuI CTGAAG 1 cut(s) 637
AfaI GTAC 6 cut(s) 114, 252, 1400, 1409, 1419, 1730
AfiI CCNNNNNNNGG 4 cut(s) 70, 596, 1122, 1264
AflII CTTAAG 1 cut(s) 1325
AflIII ACRYGT 2 cut(s) 1722, 1793
AgsI TTSAA 9 cut(s) 174, 478, 636, 668, 779, 786, 1357, 1489, 1834
AjuI GAANNNNNNNTTGG 2 cut(s) 434, 466
Alw21I GWGCWC 4 cut(s) 1206, 1533, 1866, 1880
Alw26I GTCTC 1 cut(s) 1782
Alw44I GTGCAC 1 cut(s) 1876
AlwI GGATC 3 cut(s) 581, 743, 1500
AlwNI CAGNNNCTG 1 cut(s) 1475
AoxI GGCC 2 cut(s) 349, 946
ApaLI GTGCAC 1 cut(s) 1876
ApeKI GCWGC 5 cut(s) 55, 365, 689, 722, 1453
ApoI RAATTY 4 cut(s) 478, 1089, 1316, 1580
AseI ATTAAT 1 cut(s) 1569
Asp700I GAANNNNTTC 1 cut(s) 169
AspLEI GCGC 1 cut(s) 680
AspS9I GGNCC 3 cut(s) 350, 599, 1563
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 6 cut(s) 85, 293, 1006, 1189, 1532, 1919
AvaII GGWCC 2 cut(s) 599, 1563
BaeGI GKGCMC 2 cut(s) 325, 1880
BanI GGYRCC 1 cut(s) 322
BanII GRGCYC 1 cut(s) 1866
BarI GAAGNNNNNNTAC 4 cut(s) 1013, 1045, 1382, 1414
BbsI GAAGAC 3 cut(s) 276, 387, 630
Bbv12I GWGCWC 4 cut(s) 1206, 1533, 1866, 1880
BbvCI CCTCAGC 1 cut(s) 1806
BbvI GCAGC 5 cut(s) 67, 352, 676, 734, 1465
BccI CCATC 1 cut(s) 146
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 1 cut(s) 1782
BfaI CTAG 6 cut(s) 5, 416, 465, 896, 1085, 1460
BfmI CTRYAG 3 cut(s) 628, 720, 1614
BfrI CTTAAG 1 cut(s) 1325
BfuAI ACCTGC 1 cut(s) 727
BglI GCCNNNNNGGC 1 cut(s) 954
BglII AGATCT 2 cut(s) 545, 1618
BisI GCNGC 5 cut(s) 56, 366, 690, 723, 1454
BlsI GCNGC 5 cut(s) 57, 367, 691, 724, 1455
BmcAI AGTACT 1 cut(s) 114
Bme1390I CCNGG 1 cut(s) 597
Bme18I GGWCC 2 cut(s) 599, 1563
BmgT120I GGNCC 3 cut(s) 350, 599, 1563
BmiI GGNNCC 3 cut(s) 89, 324, 421
BmrFI CCNGG 1 cut(s) 597
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 6 cut(s) 349, 689, 1402, 1564, 1602, 1924
BmuI ACTGGG 1 cut(s) 418
BoxI GACNNNNGTC 1 cut(s) 597
BpiI GAAGAC 3 cut(s) 276, 387, 630
BpmI CTGGAG 1 cut(s) 106
Bpu10I CCTNAGC 2 cut(s) 410, 1806
BpuEI CTTGAG 1 cut(s) 261
BpuMI CCSGG 1 cut(s) 597
BsaAI YACGTR 1 cut(s) 1380
BsaBI GATNNNNATC 1 cut(s) 80
BsaJI CCNNGG 4 cut(s) 124, 595, 949, 1293
BsaXI ACNNNNNCTCC 3 cut(s) 1065, 1095, 1978
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 596, 1122, 1264
Bse1I ACTGG 2 cut(s) 424, 1127
Bse3DI GCAATG 1 cut(s) 57
Bse8I GATNNNNATC 1 cut(s) 80
BseDI CCNNGG 4 cut(s) 124, 595, 949, 1293
BseGI GGATG 6 cut(s) 138, 402, 680, 807, 1048, 1593
BseJI GATNNNNATC 1 cut(s) 80
BseLI CCNNNNNNNGG 4 cut(s) 70, 596, 1122, 1264
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 6 cut(s) 202, 213, 390, 1131, 1791, 1797
BseNI ACTGG 2 cut(s) 424, 1127
BseRI GAGGAG 1 cut(s) 55
BseSI GKGCMC 2 cut(s) 325, 1880
BseXI GCAGC 5 cut(s) 67, 352, 676, 734, 1465
Bsh1236I CGCG 1 cut(s) 714
BshFI GGCC 2 cut(s) 351, 948
BshNI GGYRCC 1 cut(s) 322
BsiHKAI GWGCWC 4 cut(s) 1206, 1533, 1866, 1880
BsiSI CCGG 1 cut(s) 597
BslFI GGGAC 1 cut(s) 1311
BslI CCNNNNNNNGG 4 cut(s) 70, 596, 1122, 1264
BsmAI GTCTC 1 cut(s) 1782
BsmFI GGGAC 1 cut(s) 1311
BsmI GAATGC 2 cut(s) 169, 957
BsnI GGCC 2 cut(s) 351, 948
Bsp1286I GDGCHC 5 cut(s) 325, 1206, 1533, 1866, 1880
Bsp143I GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
BspANI GGCC 2 cut(s) 351, 948
BspCNI CTCAG 6 cut(s) 201, 214, 389, 1130, 1792, 1798
BspFNI CGCG 1 cut(s) 714
BspLI GGNNCC 3 cut(s) 89, 324, 421
BspMAI CTGCAG 1 cut(s) 724
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 3 cut(s) 581, 743, 1500
BspQI GCTCTTC 1 cut(s) 35
BspT107I GGYRCC 1 cut(s) 322
BspTI CTTAAG 1 cut(s) 1325
BsrDI GCAATG 1 cut(s) 57
BsrI ACTGG 2 cut(s) 424, 1127
BssECI CCNNGG 4 cut(s) 124, 595, 949, 1293
BssMI GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
BssT1I CCWWGG 2 cut(s) 949, 1293
Bst4CI ACNGT 7 cut(s) 632, 737, 988, 1165, 1216, 1249, 1367
Bst6I CTCTTC 1 cut(s) 35
BstAFI CTTAAG 1 cut(s) 1325
BstBAI YACGTR 1 cut(s) 1380
BstC8I GCNNGC 9 cut(s) 131, 207, 553, 1026, 1338, 1855, 1945, 1949, 1964
BstDEI CTNAG 9 cut(s) 188, 222, 376, 410, 1117, 1332, 1341, 1800, 1806
BstF5I GGATG 6 cut(s) 138, 402, 680, 807, 1048, 1593
BstFNI CGCG 1 cut(s) 714
BstHHI GCGC 1 cut(s) 680
BstKTI GATC 9 cut(s) 78, 548, 589, 706, 751, 805, 1495, 1621, 1639
BstMAI GTCTC 1 cut(s) 1782
BstMBI GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
BstMWI GCNNNNNNNGC 3 cut(s) 320, 686, 954
BstNSI RCATGY 2 cut(s) 1726, 1797
BstPAI GACNNNNGTC 1 cut(s) 597
BstSCI CCNGG 1 cut(s) 595
BstSFI CTRYAG 3 cut(s) 628, 720, 1614
BstSLI GKGCMC 2 cut(s) 325, 1880
BstSNI TACGTA 1 cut(s) 1380
BstUI CGCG 1 cut(s) 714
BstV1I GCAGC 5 cut(s) 67, 352, 676, 734, 1465
BstV2I GAAGAC 3 cut(s) 276, 387, 630
BstX2I RGATCY 3 cut(s) 545, 586, 1618
BstYI RGATCY 3 cut(s) 545, 586, 1618
BsuRI GGCC 2 cut(s) 351, 948
BtsCI GGATG 6 cut(s) 138, 402, 680, 807, 1048, 1593
BtsI GCAGTG 1 cut(s) 562
BtsIMutI CAGTG 3 cut(s) 562, 1878, 1929
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 9 cut(s) 131, 207, 553, 1026, 1338, 1855, 1945, 1949, 1964
CaiI CAGNNNCTG 1 cut(s) 1475
CfoI GCGC 1 cut(s) 680
Cfr13I GGNCC 3 cut(s) 350, 599, 1563
CpoI CGGWCCG 1 cut(s) 599
Csp6I GTAC 6 cut(s) 113, 251, 1399, 1408, 1418, 1729
CspCI CAANNNNNGTGG 6 cut(s) 844, 879, 1146, 1181, 1197, 1232
CspI CGGWCCG 1 cut(s) 599
CviAII CATG 7 cut(s) 459, 619, 821, 1723, 1753, 1794, 1867
CviQI GTAC 6 cut(s) 113, 251, 1399, 1408, 1418, 1729
DdeI CTNAG 9 cut(s) 188, 222, 376, 410, 1117, 1332, 1341, 1800, 1806
DpnI GATC 9 cut(s) 77, 547, 588, 705, 750, 804, 1494, 1620, 1638
DpnII GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
DraI TTTAAA 1 cut(s) 877
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Ecl136II GAGCTC 1 cut(s) 1864
Eco105I TACGTA 1 cut(s) 1380
Eco130I CCWWGG 2 cut(s) 949, 1293
Eco24I GRGCYC 1 cut(s) 1866
Eco47I GGWCC 2 cut(s) 599, 1563
Eco53kI GAGCTC 1 cut(s) 1864
Eco57I CTGAAG 1 cut(s) 637
EcoICRI GAGCTC 1 cut(s) 1864
EcoT14I CCWWGG 2 cut(s) 949, 1293
EcoT22I ATGCAT 1 cut(s) 1939
EcoT38I GRGCYC 1 cut(s) 1866
ErhI CCWWGG 2 cut(s) 949, 1293
FaeI CATG 7 cut(s) 462, 622, 824, 1726, 1756, 1797, 1870
FaqI GGGAC 1 cut(s) 1311
FatI CATG 7 cut(s) 458, 618, 820, 1722, 1752, 1793, 1866
FauNDI CATATG 1 cut(s) 1939
FbaI TGATCA 1 cut(s) 75
Fnu4HI GCNGC 5 cut(s) 56, 366, 690, 723, 1454
FokI GGATG 6 cut(s) 125, 409, 667, 794, 1055, 1580
FriOI GRGCYC 1 cut(s) 1866
Fsp4HI GCNGC 5 cut(s) 56, 366, 690, 723, 1454
FspBI CTAG 6 cut(s) 5, 416, 465, 896, 1085, 1460
GlaI GCGC 1 cut(s) 679
GluI GCNGC 5 cut(s) 56, 366, 690, 723, 1454
GsuI CTGGAG 1 cut(s) 106
HaeIII GGCC 2 cut(s) 351, 948
HapII CCGG 1 cut(s) 597
HhaI GCGC 1 cut(s) 680
Hin1II CATG 7 cut(s) 462, 622, 824, 1726, 1756, 1797, 1870
Hin6I GCGC 1 cut(s) 678
HinP1I GCGC 1 cut(s) 678
HincII GTYRAC 2 cut(s) 228, 1270
HindII GTYRAC 2 cut(s) 228, 1270
HindIII AAGCTT 2 cut(s) 762, 870
HinfI GANTC 4 cut(s) 224, 272, 284, 572
HpaI GTTAAC 1 cut(s) 1270
HpaII CCGG 1 cut(s) 597
HphI GGTGA 6 cut(s) 85, 293, 1006, 1189, 1532, 1919
Hpy166II GTNNAC 5 cut(s) 228, 292, 1180, 1270, 1878
Hpy188I TCNGA 9 cut(s) 191, 379, 455, 603, 1120, 1497, 1636, 1801, 1840
Hpy188III TCNNGA 4 cut(s) 85, 148, 590, 1357
Hpy8I GTNNAC 5 cut(s) 228, 292, 1180, 1270, 1878
HpyAV CCTTC 6 cut(s) 40, 1354, 1509, 1607, 1759, 1898
HpyCH4III ACNGT 7 cut(s) 632, 737, 988, 1165, 1216, 1249, 1367
HpyCH4IV ACGT 1 cut(s) 1379
HpyF10VI GCNNNNNNNGC 3 cut(s) 320, 686, 954
HpyF3I CTNAG 9 cut(s) 188, 222, 376, 410, 1117, 1332, 1341, 1800, 1806
HpySE526I ACGT 1 cut(s) 1379
Hsp92II CATG 7 cut(s) 462, 622, 824, 1726, 1756, 1797, 1870
HspAI GCGC 1 cut(s) 678
Ksp22I TGATCA 1 cut(s) 75
KspAI GTTAAC 1 cut(s) 1270
Kzo9I GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 6 cut(s) 87, 97, 585, 1073, 1461, 1998
Lsp1109I GCAGC 5 cut(s) 67, 352, 676, 734, 1465
LweI GCATC 6 cut(s) 349, 689, 1402, 1564, 1602, 1924
MaeI CTAG 6 cut(s) 5, 416, 465, 896, 1085, 1460
MaeII ACGT 1 cut(s) 1379
MaeIII GTNAC 3 cut(s) 7, 1520, 1907
MalI GATC 9 cut(s) 77, 547, 588, 705, 750, 804, 1494, 1620, 1638
MboI GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
MboII GAAGA 9 cut(s) 22, 281, 323, 392, 635, 838, 1658, 1684, 2001
MflI RGATCY 3 cut(s) 545, 586, 1618
MhlI GDGCHC 5 cut(s) 325, 1206, 1533, 1866, 1880
MlyI GAGTC 2 cut(s) 233, 266
MmeI TCCRAC 1 cut(s) 282
Mph1103I ATGCAT 1 cut(s) 1939
MroXI GAANNNNTTC 1 cut(s) 169
MseI TTAA 7 cut(s) 542, 876, 983, 1269, 1326, 1449, 1569
MslI CAYNNNNRTG 3 cut(s) 345, 1197, 1871
MspA1I CMGCKG 2 cut(s) 725, 1895
MspCI CTTAAG 1 cut(s) 1325
MspI CCGG 1 cut(s) 597
MspR9I CCNGG 1 cut(s) 597
Mva1269I GAATGC 2 cut(s) 169, 957
MvnI CGCG 1 cut(s) 714
MwoI GCNNNNNNNGC 3 cut(s) 320, 686, 954
NciI CCSGG 1 cut(s) 597
NdeI CATATG 1 cut(s) 1939
NdeII GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
NlaIII CATG 7 cut(s) 462, 622, 824, 1726, 1756, 1797, 1870
NlaIV GGNNCC 3 cut(s) 89, 324, 421
NmeAIII GCCGAG 2 cut(s) 105, 225
NmuCI GTSAC 3 cut(s) 7, 1520, 1907
NsiI ATGCAT 1 cut(s) 1939
NspI RCATGY 2 cut(s) 1726, 1797
PciI ACATGT 2 cut(s) 1722, 1793
PciSI GCTCTTC 1 cut(s) 35
PctI GAATGC 2 cut(s) 169, 957
PdmI GAANNNNTTC 1 cut(s) 169
PfeI GAWTC 2 cut(s) 284, 572
PkrI GCNGC 5 cut(s) 57, 367, 691, 724, 1455
PleI GAGTC 2 cut(s) 232, 266
PpsI GAGTC 2 cut(s) 232, 266
Ppu21I YACGTR 1 cut(s) 1380
PscI ACATGT 2 cut(s) 1722, 1793
PshAI GACNNNNGTC 1 cut(s) 597
PshBI ATTAAT 1 cut(s) 1569
PsiI TTATAA 2 cut(s) 17, 515
Psp124BI GAGCTC 1 cut(s) 1866
PspN4I GGNNCC 3 cut(s) 89, 324, 421
PspPI GGNCC 3 cut(s) 350, 599, 1563
PstI CTGCAG 1 cut(s) 724
PstNI CAGNNNCTG 1 cut(s) 1475
PsuI RGATCY 3 cut(s) 545, 586, 1618
PvuII CAGCTG 2 cut(s) 725, 1895
RsaI GTAC 6 cut(s) 114, 252, 1400, 1409, 1419, 1730
RsaNI GTAC 6 cut(s) 113, 251, 1399, 1408, 1418, 1729
RseI CAYNNNNRTG 3 cut(s) 345, 1197, 1871
Rsr2I CGGWCCG 1 cut(s) 599
RsrII CGGWCCG 1 cut(s) 599
SacI GAGCTC 1 cut(s) 1866
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 7 cut(s) 542, 876, 983, 1269, 1326, 1449, 1569
SatI GCNGC 5 cut(s) 56, 366, 690, 723, 1454
Sau3AI GATC 9 cut(s) 75, 545, 586, 703, 748, 802, 1492, 1618, 1636
Sau96I GGNCC 3 cut(s) 350, 599, 1563
ScaI AGTACT 1 cut(s) 114
SchI GAGTC 2 cut(s) 233, 266
ScrFI CCNGG 1 cut(s) 597
SduI GDGCHC 5 cut(s) 325, 1206, 1533, 1866, 1880
SfaNI GCATC 6 cut(s) 349, 689, 1402, 1564, 1602, 1924
SfcI CTRYAG 3 cut(s) 628, 720, 1614
SinI GGWCC 2 cut(s) 599, 1563
SmiMI CAYNNNNRTG 3 cut(s) 345, 1197, 1871
SmlI CTYRAG 2 cut(s) 276, 1325
SmoI CTYRAG 2 cut(s) 276, 1325
SnaBI TACGTA 1 cut(s) 1380
SspMI CTAG 6 cut(s) 5, 416, 465, 896, 1085, 1460
SstI GAGCTC 1 cut(s) 1866
StyD4I CCNGG 1 cut(s) 595
StyI CCWWGG 2 cut(s) 949, 1293
TaaI ACNGT 7 cut(s) 632, 737, 988, 1165, 1216, 1249, 1367
TaiI ACGT 1 cut(s) 1382
TaqI TCGA 2 cut(s) 1533, 1715
TatI WGTACW 2 cut(s) 112, 1407
TfiI GAWTC 2 cut(s) 284, 572
Tru1I TTAA 7 cut(s) 542, 876, 983, 1269, 1326, 1449, 1569
Tru9I TTAA 7 cut(s) 542, 876, 983, 1269, 1326, 1449, 1569
TscAI CASTG 3 cut(s) 562, 1885, 1929
TseFI GTSAC 3 cut(s) 7, 1520, 1907
TseI GCWGC 5 cut(s) 55, 365, 689, 722, 1453
Tsp45I GTSAC 3 cut(s) 7, 1520, 1907
TspDTI ATGAA 5 cut(s) 490, 892, 1242, 1659, 1741
TspGWI ACGGA 1 cut(s) 953
TspRI CASTG 3 cut(s) 562, 1885, 1929
Vha464I CTTAAG 1 cut(s) 1325
VneI GTGCAC 1 cut(s) 1876
VpaK11BI GGWCC 2 cut(s) 599, 1563
VspI ATTAAT 1 cut(s) 1569
XapI RAATTY 4 cut(s) 478, 1089, 1316, 1580
XceI RCATGY 2 cut(s) 1726, 1797
XmnI GAANNNNTTC 1 cut(s) 169
XspI CTAG 6 cut(s) 5, 416, 465, 896, 1085, 1460
ZrmI AGTACT 1 cut(s) 114
Zsp2I ATGCAT 1 cut(s) 1939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.