FvH4_3g37060

Domain of unknown function (DUF4220)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000618
Physical Location & Seq
Reverse (-)
31773772 .. 31775418
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g37060.t1

Sequence Viewer

Length: 1329 bp
ATGAGGACGACGTTGCAAATTATTCCCGAAAATTTGGACAAACTATGGAACGAATGGGATGTCCGGATAATGGTTCTAAGCAGCCTCTGCCTACAAATTGTTCTTGTACACTTTGGAAGCCGGAGAAAGTTCAGTAGTAGAAACTCGGTGAAAATTTTCACATGGATAGCCTACTTATCAGCGGACTGGGTTGCTACTGTCGCACTTGGGGTGATCTCAAGCTTCCGAAGAGATTGTAACCAAGGGAATTCCTCGCATCCAAACAGCCCGATGATCATGGCGTTTTGGACACCGTTTCTTCTTGTGCACCTTGGTGGCCCAGACAGCATCACTGCGTATTCACTCGAGGACAATGAGCTCTGGTTAAGGCATCTCTTGGGGTTACTAGTCCAAGTCGCGTATGGAGAGAGGACTTGGGTCCTGCGGTCTACAACCAGGGACAGATACAGAAACTTGTCGGCGCCTAATACTGATCATGGTAATGCTCATGTTAGTAGTTTCCGTAATGACGCCGAGGAAAAAGAAGTAGAGGATGATCTAAGAAGCAGGTTAAGTTTTTGGAAAATGAGCTCCGAAGATTTGGCAGAGGAGCGAAAACCTAGTGCTTTAGAAGCCACATTAATTCATCAAGCCTGTGTGATGTTCAAAAAGGTGTTCGTGCGCCTTTACGCAGATCTCACCATTGACTTTTTTGATAGTGAAAACAGTTATCCTTTGATTGTGGGAAGTTCATCAGAAGACTACTTCAAAGTAGTAGAGATTGAGCTTGGTTTTATGTATGATCTTCTATACACCAAGGCAACCATGGTATACTCTTTCAAAGGTATCATCTTCCGGTCCATCTGCATGCTTAGTTACATCTCAACATTTCTTATCTTTGGTCTCGTGATTAATAAGAAGCTCTATTTCACCATTGACATAGCCCTCACATACTTGTTGTTTGTTGGAGCTATTACTCTTGAACCATATGGCATTGCCCTACTACTTTCCACAGACTACTGGACATTATACTGGTTAAGCAGGAAAAAAAATATGCTCGCAGGTTGGATCTTCAAAGGAATGAATTCCTTACTGTCAATCCTAAGTCATCGCAAGAGGTGGTCTGAATCCATGGCACAATTTAGTCTTATCGACTTTTGTGTAAAAGAGAAACCCCTGAAGTGGCATGGATTTCTAAGGCTCCTTGGTATCTTCGAGATGTATGAAAAGTATCGACATACATCTCATGAAAAAGTCCCTTTCAGAATGAAAGAGCTTATCTTTCAGAAACTTCAAGATGCTAGAAATCATGTTAATGAAGAAAGAGATCCAGCATCAAAGTATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4220 DUF594

Protein Analysis

443

Amino Acids

51.59

Weight (kDa)

8.4

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4220 PF13968 55 - 134 3.3e-30 Domain of unknown function (DUF4220)
DUF4220 PF13968 134 - 379 2.2e-42 Domain of unknown function (DUF4220)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000618)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04580 FvH4_3g37050 FvH4_3g37060 FvH4_4g30270 FvH4_6g34780 FvH4_6g34780
malus_domestica MD11G1092500.v1.1 MD17G1025500.v1.1
prunus_persica Prupe.1G206300_v2.0.a1 Prupe.3G040700_v2.0.a1 Prupe.3G040900_v2.0.a1 Prupe.3G041300_v2.0.a1 Prupe.3G041600_v2.0.a1 Prupe.3G061600_v2.0.a1 Prupe.4G109300_v2.0.a1 Prupe.6G069600_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.6G069800_v2.0.a1 Prupe.8G014800_v2.0.a1 Prupe.8G037600_v2.0.a1
pyrus_communis pycom09g10050 pycom17g16040
rosa_chinensis RchiOBHm_Chr2g0145601 RchiOBHm_Chr5g0066461 RchiOBHm_Chr5g0066471 RchiOBHm_Chr5g0066481
rosa_laevigata RLG00000019691 RLG00000020148 RLG00000020153 RLG00000035869 RLG00000035878 RLG00000035880
rosa_multiflora Rmu_co8287763.1_g000001 Rmu_co8480723.1_g000001 Rmu_co8493537.1_g000001 Rmu_sc0002170.1_g000044 Rmu_sc0002599.1_g000001 Rmu_sc0002718.1_g000013 Rmu_sc0003046.1_g000008 Rmu_sc0007761.1_g000002
rosa_roxburghii Rroxscaffold_152G00434590 Rroxscaffold_1G00014400 Rroxscaffold_1G00014410 Rroxscaffold_1G00014570 Rroxscaffold_2G00100650 Rroxscaffold_2G00106640
rosa_rugosa Rorug02G0392200 Rorug02G0392400 Rorug05G0378500 Rorug05G0378500 Rorug05G0378500
rosa_samantha Rh2AG446400 Rh2AG446500 Rh2BG457100 Rh2BG457200 Rh2BG457300 Rh2BG458200 Rh2CG432200 Rh2CG433100 Rh2CG433200 Rh2DG466800 Rh2DG466900 Rh2DG467000 Rh2DG467800 Rh3DG193900 Rh5AG437600 Rh5AG437700 Rh5AG437800 Rh5BG453700 Rh5DG468800 Rh7AG352500 Rh7CG369800 Rh7DG349000
rosa_wichuraiana Rw2G036410 Rw2G036460 Rw3G014910 Rw5G040940 Rw7G029760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 537, 1031
AccB1I GGYRCC 1 cut(s) 460
AccI GTMKAC 2 cut(s) 428, 810
AccII CGCG 1 cut(s) 398
AccIII TCCGGA 1 cut(s) 63
AciI CCGC 2 cut(s) 182, 424
AclWI GGATC 2 cut(s) 1055, 1301
AcsI RAATTY 4 cut(s) 31, 153, 247, 1063
AcuI CTGAAG 1 cut(s) 1178
AcyI GRCGYC 2 cut(s) 461, 510
AfaI GTAC 1 cut(s) 108
AfiI CCNNNNNNNGG 2 cut(s) 70, 1161
AgsI TTSAA 6 cut(s) 646, 748, 820, 962, 1054, 1274
AhlI ACTAGT 1 cut(s) 385
AjnI CCWGG 1 cut(s) 434
AleI CACNNNNGTG 1 cut(s) 312
AluBI AGCT 7 cut(s) 222, 358, 570, 766, 901, 950, 1255
AluI AGCT 7 cut(s) 222, 358, 570, 766, 901, 950, 1255
Alw21I GWGCWC 3 cut(s) 309, 360, 572
Alw26I GTCTC 1 cut(s) 887
Alw44I GTGCAC 1 cut(s) 305
AlwI GGATC 2 cut(s) 1055, 1301
AlwNI CAGNNNCTG 1 cut(s) 87
Ama87I CYCGRG 1 cut(s) 344
Aor13HI TCCGGA 1 cut(s) 63
AoxI GGCC 1 cut(s) 316
ApaLI GTGCAC 1 cut(s) 305
ApeKI GCWGC 1 cut(s) 81
ApoI RAATTY 4 cut(s) 31, 153, 247, 1063
ArsI GACNNNNNNTTYG 2 cut(s) 45, 77
AseI ATTAAT 2 cut(s) 620, 891
Asp700I GAANNNNTTC 2 cut(s) 155, 1063
AspLEI GCGC 2 cut(s) 463, 663
AspS9I GGNCC 3 cut(s) 317, 418, 837
AsuHPI GGTGA 4 cut(s) 160, 223, 670, 901
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 2 cut(s) 418, 837
BaeGI GKGCMC 1 cut(s) 309
BanI GGYRCC 1 cut(s) 460
BanII GRGCYC 2 cut(s) 360, 572
BauI CACGAG 1 cut(s) 884
BbsI GAAGAC 1 cut(s) 744
Bbv12I GWGCWC 3 cut(s) 309, 360, 572
BbvI GCAGC 1 cut(s) 93
BccI CCATC 1 cut(s) 848
BciT130I CCWGG 1 cut(s) 436
BclI TGATCA 2 cut(s) 273, 472
BcoDI GTCTC 1 cut(s) 887
BcuI ACTAGT 1 cut(s) 385
BfaI CTAG 3 cut(s) 386, 600, 1281
BfoI RGCGCY 1 cut(s) 464
BfuAI ACCTGC 2 cut(s) 537, 1031
BglII AGATCT 1 cut(s) 673
BisI GCNGC 1 cut(s) 82
BlsI GCNGC 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 436
Bme18I GGWCC 2 cut(s) 418, 837
BmeT110I CYCGRG 1 cut(s) 344
BmgT120I GGNCC 3 cut(s) 317, 418, 837
BmiI GGNNCC 3 cut(s) 419, 462, 1181
BmrFI CCNGG 1 cut(s) 436
BmrI ACTGGG 1 cut(s) 196
BmsI GCATC 5 cut(s) 265, 336, 379, 1267, 1322
BmuI ACTGGG 1 cut(s) 196
BoxI GACNNNNGTC 1 cut(s) 416
BpiI GAAGAC 1 cut(s) 744
BpuEI CTTGAG 1 cut(s) 202
BsaHI GRCGYC 2 cut(s) 461, 510
BsaI GGTCTC 1 cut(s) 887
BsaJI CCNNGG 8 cut(s) 241, 310, 435, 513, 795, 804, 1110, 1183
BsaWI WCCGGW 2 cut(s) 63, 834
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 1161
Bse1I ACTGG 3 cut(s) 191, 1004, 1016
Bse3DI GCAATG 1 cut(s) 972
BseAI TCCGGA 1 cut(s) 63
BseBI CCWGG 1 cut(s) 436
BseDI CCNNGG 8 cut(s) 241, 310, 435, 513, 795, 804, 1110, 1183
BseGI GGATG 3 cut(s) 64, 256, 538
BseLI CCNNNNNNNGG 2 cut(s) 70, 1161
BseMI GCAATG 1 cut(s) 972
BseNI ACTGG 3 cut(s) 191, 1004, 1016
BseRI GAGGAG 1 cut(s) 602
BseSI GKGCMC 1 cut(s) 309
BseXI GCAGC 1 cut(s) 93
Bsh1236I CGCG 1 cut(s) 398
BshFI GGCC 1 cut(s) 318
BshNI GGYRCC 1 cut(s) 460
BsiHKAI GWGCWC 3 cut(s) 309, 360, 572
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 3 cut(s) 64, 121, 835
BslFI GGGAC 2 cut(s) 452, 1220
BslI CCNNNNNNNGG 2 cut(s) 70, 1161
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 2 cut(s) 452, 1220
BsnI GGCC 1 cut(s) 318
Bso31I GGTCTC 1 cut(s) 887
BsoBI CYCGRG 1 cut(s) 344
Bsp1286I GDGCHC 3 cut(s) 309, 360, 572
Bsp13I TCCGGA 1 cut(s) 63
Bsp1407I TGTACA 1 cut(s) 106
Bsp143I GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
Bsp19I CCATGG 2 cut(s) 804, 1110
BspACI CCGC 2 cut(s) 182, 424
BspANI GGCC 1 cut(s) 318
BspEI TCCGGA 1 cut(s) 63
BspFNI CGCG 1 cut(s) 398
BspHI TCATGA 1 cut(s) 1225
BspLI GGNNCC 3 cut(s) 419, 462, 1181
BspMI ACCTGC 2 cut(s) 537, 1031
BspPI GGATC 2 cut(s) 1055, 1301
BspT107I GGYRCC 1 cut(s) 460
BspTNI GGTCTC 1 cut(s) 887
BsrDI GCAATG 1 cut(s) 972
BsrGI TGTACA 1 cut(s) 106
BsrI ACTGG 3 cut(s) 191, 1004, 1016
BssECI CCNNGG 8 cut(s) 241, 310, 435, 513, 795, 804, 1110, 1183
BssMI GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
BssNAI GTATAC 1 cut(s) 811
BssNI GRCGYC 2 cut(s) 461, 510
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 6 cut(s) 241, 310, 795, 804, 1110, 1183
Bst1107I GTATAC 1 cut(s) 811
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 1 cut(s) 436
Bst4CI ACNGT 4 cut(s) 199, 294, 707, 1074
Bst6I CTCTTC 1 cut(s) 223
BstACI GRCGYC 2 cut(s) 461, 510
BstAPI GCANNNNNTGC 1 cut(s) 87
BstAUI TGTACA 1 cut(s) 106
BstC8I GCNNGC 2 cut(s) 848, 1038
BstDEI CTNAG 5 cut(s) 77, 539, 851, 1082, 1175
BstDSI CCRYGG 2 cut(s) 804, 1110
BstF5I GGATG 3 cut(s) 64, 256, 538
BstFNI CGCG 1 cut(s) 398
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 2 cut(s) 463, 663
BstKTI GATC 8 cut(s) 216, 276, 475, 538, 676, 784, 1050, 1309
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
BstMWI GCNNNNNNNGC 4 cut(s) 87, 200, 324, 611
BstNI CCWGG 1 cut(s) 436
BstNSI RCATGY 1 cut(s) 850
BstPAI GACNNNNGTC 1 cut(s) 416
BstSCI CCNGG 1 cut(s) 434
BstSLI GKGCMC 1 cut(s) 309
BstUI CGCG 1 cut(s) 398
BstV1I GCAGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 3 cut(s) 673, 1047, 1306
BstYI RGATCY 3 cut(s) 673, 1047, 1306
BstZ17I GTATAC 1 cut(s) 811
BsuRI GGCC 1 cut(s) 318
BtgI CCRYGG 2 cut(s) 804, 1110
BtgZI GCGATG 1 cut(s) 1073
BtsCI GGATG 3 cut(s) 64, 256, 538
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 1 cut(s) 330
BveI ACCTGC 2 cut(s) 537, 1031
Cac8I GCNNGC 2 cut(s) 848, 1038
CaiI CAGNNNCTG 1 cut(s) 87
CciI TCATGA 1 cut(s) 1225
CfoI GCGC 2 cut(s) 463, 663
Cfr13I GGNCC 3 cut(s) 317, 418, 837
CseI GACGC 1 cut(s) 518
Csp6I GTAC 1 cut(s) 107
CviQI GTAC 1 cut(s) 107
DdeI CTNAG 5 cut(s) 77, 539, 851, 1082, 1175
DinI GGCGCC 1 cut(s) 462
DpnI GATC 8 cut(s) 215, 275, 474, 537, 675, 783, 1049, 1308
DpnII GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
Eam1104I CTCTTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 223
Ecl136II GAGCTC 2 cut(s) 358, 570
Eco130I CCWWGG 6 cut(s) 241, 310, 795, 804, 1110, 1183
Eco24I GRGCYC 2 cut(s) 360, 572
Eco31I GGTCTC 1 cut(s) 887
Eco47I GGWCC 2 cut(s) 418, 837
Eco53kI GAGCTC 2 cut(s) 358, 570
Eco57I CTGAAG 1 cut(s) 1178
Eco88I CYCGRG 1 cut(s) 344
EcoICRI GAGCTC 2 cut(s) 358, 570
EcoO109I RGGNCCY 1 cut(s) 418
EcoRI GAATTC 2 cut(s) 247, 1063
EcoRII CCWGG 1 cut(s) 434
EcoT14I CCWWGG 6 cut(s) 241, 310, 795, 804, 1110, 1183
EcoT38I GRGCYC 2 cut(s) 360, 572
EgeI GGCGCC 1 cut(s) 462
EheI GGCGCC 1 cut(s) 462
ErhI CCWWGG 6 cut(s) 241, 310, 795, 804, 1110, 1183
FaqI GGGAC 2 cut(s) 452, 1220
FauNDI CATATG 1 cut(s) 967
FbaI TGATCA 2 cut(s) 273, 472
FblI GTMKAC 2 cut(s) 428, 810
Fnu4HI GCNGC 1 cut(s) 82
FokI GGATG 3 cut(s) 71, 243, 545
FriOI GRGCYC 2 cut(s) 360, 572
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 3 cut(s) 386, 600, 1281
GlaI GCGC 2 cut(s) 462, 662
GluI GCNGC 1 cut(s) 82
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 1 cut(s) 318
HapII CCGG 3 cut(s) 64, 121, 835
HgaI GACGC 1 cut(s) 518
HhaI GCGC 2 cut(s) 463, 663
Hin1I GRCGYC 2 cut(s) 461, 510
Hin6I GCGC 2 cut(s) 461, 661
HinP1I GCGC 2 cut(s) 461, 661
HindIII AAGCTT 1 cut(s) 220
HinfI GANTC 1 cut(s) 1106
HpaII CCGG 3 cut(s) 64, 121, 835
HphI GGTGA 4 cut(s) 160, 223, 670, 901
Hpy166II GTNNAC 4 cut(s) 109, 307, 429, 811
Hpy188I TCNGA 6 cut(s) 227, 574, 736, 1105, 1244, 1266
Hpy188III TCNNGA 7 cut(s) 26, 64, 886, 959, 1195, 1226, 1274
Hpy8I GTNNAC 4 cut(s) 109, 307, 429, 811
Hpy99I CGWCG 1 cut(s) 13
HpyCH4III ACNGT 4 cut(s) 199, 294, 707, 1074
HpyCH4IV ACGT 1 cut(s) 11
HpyCH4V TGCA 3 cut(s) 16, 307, 846
HpyF10VI GCNNNNNNNGC 4 cut(s) 87, 200, 324, 611
HpyF3I CTNAG 5 cut(s) 77, 539, 851, 1082, 1175
HpySE526I ACGT 1 cut(s) 11
Hsp92I GRCGYC 2 cut(s) 461, 510
HspAI GCGC 2 cut(s) 461, 661
KasI GGCGCC 1 cut(s) 460
Kpn2I TCCGGA 1 cut(s) 63
Ksp22I TGATCA 2 cut(s) 273, 472
Kzo9I GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
LmnI GCTCC 4 cut(s) 575, 589, 947, 1185
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 5 cut(s) 265, 336, 379, 1267, 1322
MaeI CTAG 3 cut(s) 386, 600, 1281
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 3 cut(s) 236, 381, 854
MalI GATC 8 cut(s) 215, 275, 474, 537, 675, 783, 1049, 1308
MboI GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
MboII GAAGA 9 cut(s) 240, 290, 587, 749, 776, 823, 1042, 1183, 1310
MflI RGATCY 3 cut(s) 673, 1047, 1306
MhlI GDGCHC 3 cut(s) 309, 360, 572
MluCI AATT 8 cut(s) 18, 31, 96, 153, 247, 621, 1063, 1118
Mly113I GGCGCC 1 cut(s) 461
MmeI TCCRAC 2 cut(s) 925, 1025
MnlI CCTC 9 cut(s) 95, 262, 340, 402, 508, 523, 580, 935, 1089
MroI TCCGGA 1 cut(s) 63
MroXI GAANNNNTTC 2 cut(s) 155, 1063
MseI TTAA 7 cut(s) 365, 551, 620, 891, 1016, 1293, 1327
MslI CAYNNNNRTG 4 cut(s) 312, 480, 845, 1293
MspA1I CMGCKG 1 cut(s) 182
MspI CCGG 3 cut(s) 64, 121, 835
MspR9I CCNGG 1 cut(s) 436
MvaI CCWGG 1 cut(s) 436
MvnI CGCG 1 cut(s) 398
MwoI GCNNNNNNNGC 4 cut(s) 87, 200, 324, 611
NarI GGCGCC 1 cut(s) 461
NcoI CCATGG 2 cut(s) 804, 1110
NdeI CATATG 1 cut(s) 967
NdeII GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
NlaIV GGNNCC 3 cut(s) 419, 462, 1181
NmeAIII GCCGAG 1 cut(s) 538
NspI RCATGY 1 cut(s) 850
OliI CACNNNNGTG 1 cut(s) 312
PaeI GCATGC 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 344
PagI TCATGA 1 cut(s) 1225
PdmI GAANNNNTTC 2 cut(s) 155, 1063
PfeI GAWTC 1 cut(s) 1106
PkrI GCNGC 1 cut(s) 83
PluTI GGCGCC 1 cut(s) 464
PpuMI RGGWCCY 1 cut(s) 418
PshAI GACNNNNGTC 1 cut(s) 416
PshBI ATTAAT 2 cut(s) 620, 891
Psp124BI GAGCTC 2 cut(s) 360, 572
Psp5II RGGWCCY 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 434
PspGI CCWGG 1 cut(s) 434
PspN4I GGNNCC 3 cut(s) 419, 462, 1181
PspPI GGNCC 3 cut(s) 317, 418, 837
PspPPI RGGWCCY 1 cut(s) 418
PspXI VCTCGAGB 1 cut(s) 344
PstNI CAGNNNCTG 1 cut(s) 87
PsuI RGATCY 3 cut(s) 673, 1047, 1306
RsaI GTAC 1 cut(s) 108
RsaNI GTAC 1 cut(s) 107
RseI CAYNNNNRTG 4 cut(s) 312, 480, 845, 1293
SacI GAGCTC 2 cut(s) 360, 572
SaqAI TTAA 7 cut(s) 365, 551, 620, 891, 1016, 1293, 1327
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 8 cut(s) 213, 273, 472, 535, 673, 781, 1047, 1306
Sau96I GGNCC 3 cut(s) 317, 418, 837
ScrFI CCNGG 1 cut(s) 436
SduI GDGCHC 3 cut(s) 309, 360, 572
SfaNI GCATC 5 cut(s) 265, 336, 379, 1267, 1322
SfoI GGCGCC 1 cut(s) 462
Sfr274I CTCGAG 1 cut(s) 344
SinI GGWCC 2 cut(s) 418, 837
SlaI CTCGAG 1 cut(s) 344
SmiMI CAYNNNNRTG 4 cut(s) 312, 480, 845, 1293
SmlI CTYRAG 2 cut(s) 217, 344
SmoI CTYRAG 2 cut(s) 217, 344
SpeI ACTAGT 1 cut(s) 385
SphI GCATGC 1 cut(s) 850
Sse9I AATT 8 cut(s) 18, 31, 96, 153, 247, 621, 1063, 1118
SsiI CCGC 2 cut(s) 182, 424
SspDI GGCGCC 1 cut(s) 460
SspMI CTAG 3 cut(s) 386, 600, 1281
SstI GAGCTC 2 cut(s) 360, 572
StyD4I CCNGG 1 cut(s) 434
StyI CCWWGG 6 cut(s) 241, 310, 795, 804, 1110, 1183
TaaI ACNGT 4 cut(s) 199, 294, 707, 1074
TaiI ACGT 1 cut(s) 14
TaqI TCGA 4 cut(s) 345, 1131, 1194, 1213
TasI AATT 8 cut(s) 18, 31, 96, 153, 247, 621, 1063, 1118
TatI WGTACW 1 cut(s) 106
TfiI GAWTC 1 cut(s) 1106
Tru1I TTAA 7 cut(s) 365, 551, 620, 891, 1016, 1293, 1327
Tru9I TTAA 7 cut(s) 365, 551, 620, 891, 1016, 1293, 1327
TscAI CASTG 1 cut(s) 337
TseI GCWGC 1 cut(s) 81
TspDTI ATGAA 7 cut(s) 614, 720, 1076, 1218, 1242, 1262, 1311
TspGWI ACGGA 1 cut(s) 491
TspRI CASTG 1 cut(s) 337
VneI GTGCAC 1 cut(s) 305
VpaK11BI GGWCC 2 cut(s) 418, 837
VspI ATTAAT 2 cut(s) 620, 891
XapI RAATTY 4 cut(s) 31, 153, 247, 1063
XceI RCATGY 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 2 cut(s) 398, 802
XhoI CTCGAG 1 cut(s) 344
XmiI GTMKAC 2 cut(s) 428, 810
XmnI GAANNNNTTC 2 cut(s) 155, 1063
XspI CTAG 3 cut(s) 386, 600, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.