SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 14 - 61 | 5.5e-17 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 17 - 77 | 1.9e-13 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 67 - 112 | 7.2e-18 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 70 - 115 | 1.1e-08 | Myb-like DNA-binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 776 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 883, 948 |
| AccI | GTMKAC | 1 cut(s) | 1204 |
| AciI | CCGC | 9 cut(s) | 414, 612, 615, 618, 1020, 1059, 1062, 1068, 1140 |
| AcoI | YGGCCR | 6 cut(s) | 97, 415, 538, 747, 1017, 1116 |
| AcsI | RAATTY | 1 cut(s) | 736 |
| AcuI | CTGAAG | 1 cut(s) | 530 |
| AcyI | GRCGYC | 2 cut(s) | 53, 773 |
| AfaI | GTAC | 3 cut(s) | 803, 919, 931 |
| AfeI | AGCGCT | 2 cut(s) | 466, 630 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 424, 486, 536, 663, 883, 948 |
| AflIII | ACRYGT | 1 cut(s) | 1080 |
| AgsI | TTSAA | 3 cut(s) | 37, 239, 862 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 763 |
| AjiI | CACGTC | 2 cut(s) | 624, 997 |
| AjnI | CCWGG | 3 cut(s) | 87, 485, 656 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 935, 967 |
| Alw21I | GWGCWC | 1 cut(s) | 651 |
| Alw26I | GTCTC | 4 cut(s) | 15, 687, 771, 834 |
| Ama87I | CYCGRG | 2 cut(s) | 473, 761 |
| Aor51HI | AGCGCT | 2 cut(s) | 466, 630 |
| AoxI | GGCC | 9 cut(s) | 97, 185, 415, 477, 483, 538, 747, 1017, 1116 |
| ApoI | RAATTY | 1 cut(s) | 736 |
| AspLEI | GCGC | 2 cut(s) | 467, 631 |
| AspS9I | GGNCC | 2 cut(s) | 44, 405 |
| AsuC2I | CCSGG | 2 cut(s) | 791, 1234 |
| AsuHPI | GGTGA | 3 cut(s) | 518, 1218, 1228 |
| AvaI | CYCGRG | 2 cut(s) | 473, 761 |
| AvaII | GGWCC | 2 cut(s) | 44, 405 |
| AxyI | CCTNAGG | 2 cut(s) | 57, 182 |
| BalI | TGGCCA | 2 cut(s) | 540, 749 |
| BanII | GRGCYC | 1 cut(s) | 138 |
| BbsI | GAAGAC | 1 cut(s) | 69 |
| Bbv12I | GWGCWC | 1 cut(s) | 651 |
| BccI | CCATC | 7 cut(s) | 239, 349, 561, 739, 877, 1139, 1237 |
| BceAI | ACGGC | 4 cut(s) | 112, 436, 619, 1131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 871, 905 |
| BciT130I | CCWGG | 3 cut(s) | 89, 487, 658 |
| BclI | TGATCA | 2 cut(s) | 519, 1102 |
| BcnI | CCSGG | 2 cut(s) | 791, 1234 |
| BcoDI | GTCTC | 4 cut(s) | 15, 687, 771, 834 |
| BfmI | CTRYAG | 1 cut(s) | 273 |
| BfoI | RGCGCY | 2 cut(s) | 468, 632 |
| BglII | AGATCT | 1 cut(s) | 1125 |
| Bme1390I | CCNGG | 5 cut(s) | 89, 487, 658, 791, 1234 |
| Bme18I | GGWCC | 2 cut(s) | 44, 405 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 763 |
| BmeT110I | CYCGRG | 2 cut(s) | 473, 761 |
| BmgBI | CACGTC | 2 cut(s) | 624, 997 |
| BmgT120I | GGNCC | 2 cut(s) | 44, 405 |
| BmiI | GGNNCC | 3 cut(s) | 137, 406, 1066 |
| BmrFI | CCNGG | 5 cut(s) | 89, 487, 658, 791, 1234 |
| BmrI | ACTGGG | 1 cut(s) | 1204 |
| BmsI | GCATC | 2 cut(s) | 369, 913 |
| BmuI | ACTGGG | 1 cut(s) | 1204 |
| BpiI | GAAGAC | 1 cut(s) | 69 |
| Bpu10I | CCTNAGC | 1 cut(s) | 440 |
| BpuEI | CTTGAG | 1 cut(s) | 320 |
| BpuMI | CCSGG | 2 cut(s) | 791, 1234 |
| BsaBI | GATNNNNATC | 1 cut(s) | 359 |
| BsaHI | GRCGYC | 2 cut(s) | 53, 773 |
| BsaI | GGTCTC | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 8 cut(s) | 47, 100, 418, 480, 535, 750, 947, 1074 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 424, 486, 536, 663, 883, 948 |
| Bse118I | RCCGGY | 2 cut(s) | 121, 1015 |
| Bse1I | ACTGG | 2 cut(s) | 326, 1199 |
| Bse21I | CCTNAGG | 2 cut(s) | 57, 182 |
| Bse8I | GATNNNNATC | 1 cut(s) | 359 |
| BseBI | CCWGG | 3 cut(s) | 89, 487, 658 |
| BseDI | CCNNGG | 8 cut(s) | 47, 100, 418, 480, 535, 750, 947, 1074 |
| BseGI | GGATG | 5 cut(s) | 84, 649, 928, 1150, 1229 |
| BseJI | GATNNNNATC | 1 cut(s) | 359 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 424, 486, 536, 663, 883, 948 |
| BseMII | CTCAG | 5 cut(s) | 48, 155, 173, 431, 467 |
| BseNI | ACTGG | 2 cut(s) | 326, 1199 |
| BseRI | GAGGAG | 2 cut(s) | 551, 1193 |
| BseX3I | CGGCCG | 2 cut(s) | 1017, 1116 |
| BsgI | GTGCAG | 1 cut(s) | 857 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1020, 1119 |
| BshFI | GGCC | 9 cut(s) | 99, 187, 417, 479, 485, 540, 749, 1019, 1118 |
| BsiEI | CGRYCG | 2 cut(s) | 1020, 1119 |
| BsiHKAI | GWGCWC | 1 cut(s) | 651 |
| BsiHKCI | CYCGRG | 2 cut(s) | 473, 761 |
| BsiSI | CCGG | 6 cut(s) | 122, 408, 791, 1016, 1119, 1233 |
| BslFI | GGGAC | 1 cut(s) | 1211 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 424, 486, 536, 663, 883, 948 |
| BsmAI | GTCTC | 4 cut(s) | 15, 687, 771, 834 |
| BsmFI | GGGAC | 1 cut(s) | 1211 |
| BsmI | GAATGC | 1 cut(s) | 1225 |
| BsnI | GGCC | 9 cut(s) | 99, 187, 417, 479, 485, 540, 749, 1019, 1118 |
| Bso31I | GGTCTC | 1 cut(s) | 15 |
| BsoBI | CYCGRG | 2 cut(s) | 473, 761 |
| Bsp1286I | GDGCHC | 2 cut(s) | 138, 651 |
| Bsp143I | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| Bsp19I | CCATGG | 4 cut(s) | 47, 100, 535, 750 |
| BspACI | CCGC | 9 cut(s) | 414, 612, 615, 618, 1020, 1059, 1062, 1068, 1140 |
| BspANI | GGCC | 9 cut(s) | 99, 187, 417, 479, 485, 540, 749, 1019, 1118 |
| BspCNI | CTCAG | 5 cut(s) | 49, 156, 174, 432, 466 |
| BspHI | TCATGA | 1 cut(s) | 516 |
| BspLI | GGNNCC | 3 cut(s) | 137, 406, 1066 |
| BspQI | GCTCTTC | 3 cut(s) | 146, 216, 255 |
| BspTNI | GGTCTC | 1 cut(s) | 15 |
| BsrFI | RCCGGY | 2 cut(s) | 121, 1015 |
| BsrI | ACTGG | 2 cut(s) | 326, 1199 |
| BssAI | RCCGGY | 2 cut(s) | 121, 1015 |
| BssECI | CCNNGG | 8 cut(s) | 47, 100, 418, 480, 535, 750, 947, 1074 |
| BssMI | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| BssNAI | GTATAC | 1 cut(s) | 1205 |
| BssNI | GRCGYC | 2 cut(s) | 53, 773 |
| BssT1I | CCWWGG | 4 cut(s) | 47, 100, 535, 750 |
| Bst1107I | GTATAC | 1 cut(s) | 1205 |
| Bst2UI | CCWGG | 3 cut(s) | 89, 487, 658 |
| Bst4CI | ACNGT | 3 cut(s) | 704, 965, 1202 |
| Bst6I | CTCTTC | 3 cut(s) | 146, 216, 255 |
| BstACI | GRCGYC | 2 cut(s) | 53, 773 |
| BstC8I | GCNNGC | 5 cut(s) | 110, 114, 123, 542, 1017 |
| BstDEI | CTNAG | 5 cut(s) | 57, 164, 182, 440, 453 |
| BstDSI | CCRYGG | 6 cut(s) | 47, 100, 418, 535, 750, 947 |
| BstF5I | GGATG | 5 cut(s) | 84, 649, 928, 1150, 1229 |
| BstH2I | RGCGCY | 2 cut(s) | 468, 632 |
| BstHHI | GCGC | 2 cut(s) | 467, 631 |
| BstKTI | GATC | 4 cut(s) | 312, 522, 1105, 1128 |
| BstMAI | GTCTC | 4 cut(s) | 15, 687, 771, 834 |
| BstMBI | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| BstMCI | CGRYCG | 2 cut(s) | 1020, 1119 |
| BstNI | CCWGG | 3 cut(s) | 89, 487, 658 |
| BstNSI | RCATGY | 1 cut(s) | 1084 |
| BstSCI | CCNGG | 5 cut(s) | 87, 485, 656, 789, 1232 |
| BstSFI | CTRYAG | 1 cut(s) | 273 |
| BstV2I | GAAGAC | 1 cut(s) | 69 |
| BstX2I | RGATCY | 1 cut(s) | 1125 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 146, 1045 |
| BstYI | RGATCY | 1 cut(s) | 1125 |
| BstZ17I | GTATAC | 1 cut(s) | 1205 |
| BstZI | CGGCCG | 2 cut(s) | 1017, 1116 |
| Bsu36I | CCTNAGG | 2 cut(s) | 57, 182 |
| BsuRI | GGCC | 9 cut(s) | 99, 187, 417, 479, 485, 540, 749, 1019, 1118 |
| BtgI | CCRYGG | 6 cut(s) | 47, 100, 418, 535, 750, 947 |
| BtrI | CACGTC | 2 cut(s) | 624, 997 |
| BtsCI | GGATG | 5 cut(s) | 84, 649, 928, 1150, 1229 |
| BtsIMutI | CAGTG | 1 cut(s) | 461 |
| Cac8I | GCNNGC | 5 cut(s) | 110, 114, 123, 542, 1017 |
| CciI | TCATGA | 1 cut(s) | 516 |
| CfoI | GCGC | 2 cut(s) | 467, 631 |
| Cfr10I | RCCGGY | 2 cut(s) | 121, 1015 |
| Cfr13I | GGNCC | 2 cut(s) | 44, 405 |
| CseI | GACGC | 2 cut(s) | 61, 437 |
| Csp6I | GTAC | 3 cut(s) | 802, 918, 930 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 650, 685, 685, 720 |
| CviQI | GTAC | 3 cut(s) | 802, 918, 930 |
| DdeI | CTNAG | 5 cut(s) | 57, 164, 182, 440, 453 |
| DpnI | GATC | 4 cut(s) | 311, 521, 1104, 1127 |
| DpnII | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| DriI | GACNNNNNGTC | 1 cut(s) | 763 |
| EaeI | YGGCCR | 6 cut(s) | 97, 415, 538, 747, 1017, 1116 |
| EagI | CGGCCG | 2 cut(s) | 1017, 1116 |
| Eam1104I | CTCTTC | 3 cut(s) | 146, 216, 255 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 763 |
| EarI | CTCTTC | 3 cut(s) | 146, 216, 255 |
| EciI | GGCGGA | 1 cut(s) | 1077 |
| EclXI | CGGCCG | 2 cut(s) | 1017, 1116 |
| Eco130I | CCWWGG | 4 cut(s) | 47, 100, 535, 750 |
| Eco147I | AGGCCT | 1 cut(s) | 187 |
| Eco24I | GRGCYC | 1 cut(s) | 138 |
| Eco31I | GGTCTC | 1 cut(s) | 15 |
| Eco32I | GATATC | 1 cut(s) | 193 |
| Eco47I | GGWCC | 2 cut(s) | 44, 405 |
| Eco47III | AGCGCT | 2 cut(s) | 466, 630 |
| Eco52I | CGGCCG | 2 cut(s) | 1017, 1116 |
| Eco57I | CTGAAG | 1 cut(s) | 530 |
| Eco81I | CCTNAGG | 2 cut(s) | 57, 182 |
| Eco88I | CYCGRG | 2 cut(s) | 473, 761 |
| EcoRII | CCWGG | 3 cut(s) | 87, 485, 656 |
| EcoRV | GATATC | 1 cut(s) | 193 |
| EcoT14I | CCWWGG | 4 cut(s) | 47, 100, 535, 750 |
| EcoT22I | ATGCAT | 1 cut(s) | 907 |
| EcoT38I | GRGCYC | 1 cut(s) | 138 |
| ErhI | CCWWGG | 4 cut(s) | 47, 100, 535, 750 |
| FaqI | GGGAC | 1 cut(s) | 1211 |
| FauI | CCCGC | 1 cut(s) | 1133 |
| FbaI | TGATCA | 2 cut(s) | 519, 1102 |
| FblI | GTMKAC | 1 cut(s) | 1204 |
| FokI | GGATG | 5 cut(s) | 71, 656, 935, 1157, 1216 |
| FriOI | GRGCYC | 1 cut(s) | 138 |
| GlaI | GCGC | 2 cut(s) | 466, 630 |
| HaeII | RGCGCY | 2 cut(s) | 468, 632 |
| HaeIII | GGCC | 9 cut(s) | 99, 187, 417, 479, 485, 540, 749, 1019, 1118 |
| HapII | CCGG | 6 cut(s) | 122, 408, 791, 1016, 1119, 1233 |
| HgaI | GACGC | 2 cut(s) | 61, 437 |
| HhaI | GCGC | 2 cut(s) | 467, 631 |
| Hin1I | GRCGYC | 2 cut(s) | 53, 773 |
| Hin6I | GCGC | 2 cut(s) | 465, 629 |
| HinP1I | GCGC | 2 cut(s) | 465, 629 |
| HinfI | GANTC | 2 cut(s) | 500, 764 |
| HpaII | CCGG | 6 cut(s) | 122, 408, 791, 1016, 1119, 1233 |
| HphI | GGTGA | 3 cut(s) | 518, 1218, 1228 |
| Hpy166II | GTNNAC | 4 cut(s) | 171, 777, 1090, 1205 |
| Hpy188I | TCNGA | 8 cut(s) | 497, 692, 771, 856, 1078, 1099, 1107, 1132 |
| Hpy188III | TCNNGA | 4 cut(s) | 313, 337, 517, 641 |
| Hpy8I | GTNNAC | 4 cut(s) | 171, 777, 1090, 1205 |
| Hpy99I | CGWCG | 2 cut(s) | 775, 965 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 3 cut(s) | 704, 965, 1202 |
| HpyCH4IV | ACGT | 5 cut(s) | 623, 773, 779, 996, 1005 |
| HpyCH4V | TGCA | 6 cut(s) | 217, 826, 874, 892, 905, 926 |
| HpyF3I | CTNAG | 5 cut(s) | 57, 164, 182, 440, 453 |
| HpySE526I | ACGT | 5 cut(s) | 623, 773, 779, 996, 1005 |
| Hsp92I | GRCGYC | 2 cut(s) | 53, 773 |
| HspAI | GCGC | 2 cut(s) | 465, 629 |
| KroI | GCCGGC | 2 cut(s) | 121, 1015 |
| KroNI | GCCGGC | 2 cut(s) | 123, 1017 |
| Ksp22I | TGATCA | 2 cut(s) | 519, 1102 |
| Kzo9I | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| LguI | GCTCTTC | 3 cut(s) | 146, 216, 255 |
| LmnI | GCTCC | 5 cut(s) | 78, 141, 564, 1064, 1188 |
| LweI | GCATC | 2 cut(s) | 369, 913 |
| MaeII | ACGT | 5 cut(s) | 623, 773, 779, 996, 1005 |
| MaeIII | GTNAC | 1 cut(s) | 370 |
| MalI | GATC | 4 cut(s) | 311, 521, 1104, 1127 |
| MboI | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| MboII | GAAGA | 4 cut(s) | 74, 163, 233, 242 |
| MflI | RGATCY | 1 cut(s) | 1125 |
| MhlI | GDGCHC | 2 cut(s) | 138, 651 |
| MlsI | TGGCCA | 2 cut(s) | 540, 749 |
| MluCI | AATT | 1 cut(s) | 736 |
| MluNI | TGGCCA | 2 cut(s) | 540, 749 |
| MlyI | GAGTC | 1 cut(s) | 773 |
| MmeI | TCCRAC | 1 cut(s) | 794 |
| Mox20I | TGGCCA | 2 cut(s) | 540, 749 |
| Mph1103I | ATGCAT | 1 cut(s) | 907 |
| MroNI | GCCGGC | 2 cut(s) | 121, 1015 |
| MscI | TGGCCA | 2 cut(s) | 540, 749 |
| MseI | TTAA | 2 cut(s) | 834, 1249 |
| Msp20I | TGGCCA | 2 cut(s) | 540, 749 |
| MspA1I | CMGCKG | 2 cut(s) | 414, 1022 |
| MspI | CCGG | 6 cut(s) | 122, 408, 791, 1016, 1119, 1233 |
| MspR9I | CCNGG | 5 cut(s) | 89, 487, 658, 791, 1234 |
| Mva1269I | GAATGC | 1 cut(s) | 1225 |
| MvaI | CCWGG | 3 cut(s) | 89, 487, 658 |
| NaeI | GCCGGC | 2 cut(s) | 123, 1017 |
| NciI | CCSGG | 2 cut(s) | 791, 1234 |
| NcoI | CCATGG | 4 cut(s) | 47, 100, 535, 750 |
| NdeII | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| NgoMIV | GCCGGC | 2 cut(s) | 121, 1015 |
| NlaIV | GGNNCC | 3 cut(s) | 137, 406, 1066 |
| NmeAIII | GCCGAG | 2 cut(s) | 448, 505 |
| NmuCI | GTSAC | 1 cut(s) | 370 |
| NsiI | ATGCAT | 1 cut(s) | 907 |
| NspI | RCATGY | 1 cut(s) | 1084 |
| PaeR7I | CTCGAG | 2 cut(s) | 473, 761 |
| PagI | TCATGA | 1 cut(s) | 516 |
| PceI | AGGCCT | 1 cut(s) | 187 |
| PciI | ACATGT | 1 cut(s) | 1080 |
| PciSI | GCTCTTC | 3 cut(s) | 146, 216, 255 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 680, 1002 |
| PctI | GAATGC | 1 cut(s) | 1225 |
| PdiI | GCCGGC | 2 cut(s) | 123, 1017 |
| PfeI | GAWTC | 1 cut(s) | 500 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 883, 948 |
| PfoI | TCCNGGA | 1 cut(s) | 87 |
| PleI | GAGTC | 1 cut(s) | 772 |
| PpsI | GAGTC | 1 cut(s) | 772 |
| PscI | ACATGT | 1 cut(s) | 1080 |
| Psp6I | CCWGG | 3 cut(s) | 87, 485, 656 |
| PspGI | CCWGG | 3 cut(s) | 87, 485, 656 |
| PspN4I | GGNNCC | 3 cut(s) | 137, 406, 1066 |
| PspPI | GGNCC | 2 cut(s) | 44, 405 |
| PspXI | VCTCGAGB | 2 cut(s) | 473, 761 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1175, 1207 |
| PsuI | RGATCY | 1 cut(s) | 1125 |
| RsaI | GTAC | 3 cut(s) | 803, 919, 931 |
| RsaNI | GTAC | 3 cut(s) | 802, 918, 930 |
| SapI | GCTCTTC | 3 cut(s) | 146, 216, 255 |
| SaqAI | TTAA | 2 cut(s) | 834, 1249 |
| Sau3AI | GATC | 4 cut(s) | 309, 519, 1102, 1125 |
| Sau96I | GGNCC | 2 cut(s) | 44, 405 |
| SchI | GAGTC | 1 cut(s) | 773 |
| ScrFI | CCNGG | 5 cut(s) | 89, 487, 658, 791, 1234 |
| SduI | GDGCHC | 2 cut(s) | 138, 651 |
| SfaNI | GCATC | 2 cut(s) | 369, 913 |
| SfcI | CTRYAG | 1 cut(s) | 273 |
| Sfr274I | CTCGAG | 2 cut(s) | 473, 761 |
| SinI | GGWCC | 2 cut(s) | 44, 405 |
| SlaI | CTCGAG | 2 cut(s) | 473, 761 |
| SmlI | CTYRAG | 3 cut(s) | 335, 473, 761 |
| SmoI | CTYRAG | 3 cut(s) | 335, 473, 761 |
| Sse9I | AATT | 1 cut(s) | 736 |
| SseBI | AGGCCT | 1 cut(s) | 187 |
| SsiI | CCGC | 9 cut(s) | 414, 612, 615, 618, 1020, 1059, 1062, 1068, 1140 |
| StuI | AGGCCT | 1 cut(s) | 187 |
| StyD4I | CCNGG | 5 cut(s) | 87, 485, 656, 789, 1232 |
| StyI | CCWWGG | 4 cut(s) | 47, 100, 535, 750 |
| TaaI | ACNGT | 3 cut(s) | 704, 965, 1202 |
| TaiI | ACGT | 5 cut(s) | 626, 776, 782, 999, 1008 |
| TaqI | TCGA | 4 cut(s) | 363, 474, 762, 881 |
| TasI | AATT | 1 cut(s) | 736 |
| TatI | WGTACW | 1 cut(s) | 929 |
| TauI | GCSGC | 7 cut(s) | 417, 614, 617, 620, 1022, 1062, 1070 |
| TfiI | GAWTC | 1 cut(s) | 500 |
| Tru1I | TTAA | 2 cut(s) | 834, 1249 |
| Tru9I | TTAA | 2 cut(s) | 834, 1249 |
| TscAI | CASTG | 1 cut(s) | 461 |
| TseFI | GTSAC | 1 cut(s) | 370 |
| Tsp45I | GTSAC | 1 cut(s) | 370 |
| TspDTI | ATGAA | 2 cut(s) | 749, 890 |
| TspGWI | ACGGA | 2 cut(s) | 606, 935 |
| TspRI | CASTG | 1 cut(s) | 461 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 883, 948 |
| VpaK11BI | GGWCC | 2 cut(s) | 44, 405 |
| XapI | RAATTY | 1 cut(s) | 736 |
| XceI | RCATGY | 1 cut(s) | 1084 |
| XhoI | CTCGAG | 2 cut(s) | 473, 761 |
| XmiI | GTMKAC | 1 cut(s) | 1204 |
| ZraI | GACGTC | 1 cut(s) | 774 |
| Zsp2I | ATGCAT | 1 cut(s) | 907 |