Transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 15 - 62 | 2.1e-17 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 18 - 78 | 2.4e-12 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 68 - 111 | 4.7e-16 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 72 - 123 | 6.4e-09 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 805 |
| AciI | CCGC | 5 cut(s) | 15, 150, 533, 609, 654 |
| AclWI | GGATC | 3 cut(s) | 645, 693, 832 |
| AcoI | YGGCCR | 4 cut(s) | 100, 273, 351, 724 |
| AcsI | RAATTY | 1 cut(s) | 208 |
| AcuI | CTGAAG | 2 cut(s) | 81, 359 |
| AcyI | GRCGYC | 2 cut(s) | 29, 806 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 32, 64, 486 |
| AgsI | TTSAA | 4 cut(s) | 92, 242, 476, 914 |
| AhlI | ACTAGT | 2 cut(s) | 574, 932 |
| AjnI | CCWGG | 3 cut(s) | 467, 485, 681 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 222, 254, 332, 364 |
| AluBI | AGCT | 6 cut(s) | 83, 111, 134, 159, 281, 562 |
| AluI | AGCT | 6 cut(s) | 83, 111, 134, 159, 281, 562 |
| AlwI | GGATC | 3 cut(s) | 645, 693, 832 |
| AoxI | GGCC | 6 cut(s) | 100, 273, 351, 483, 679, 724 |
| ApeKI | GCWGC | 3 cut(s) | 281, 392, 656 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 629, 661 |
| AseI | ATTAAT | 1 cut(s) | 947 |
| AspLEI | GCGC | 2 cut(s) | 529, 808 |
| AspS9I | GGNCC | 3 cut(s) | 54, 737, 889 |
| AvaII | GGWCC | 3 cut(s) | 54, 737, 889 |
| BalI | TGGCCA | 1 cut(s) | 353 |
| BanI | GGYRCC | 1 cut(s) | 805 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BbvI | GCAGC | 3 cut(s) | 268, 379, 643 |
| BccI | CCATC | 4 cut(s) | 242, 778, 817, 903 |
| BceAI | ACGGC | 4 cut(s) | 115, 694, 739, 819 |
| BciT130I | CCWGG | 3 cut(s) | 469, 487, 683 |
| BclI | TGATCA | 1 cut(s) | 763 |
| BcuI | ACTAGT | 2 cut(s) | 574, 932 |
| BfaI | CTAG | 4 cut(s) | 12, 575, 599, 933 |
| BfmI | CTRYAG | 1 cut(s) | 160 |
| BfoI | RGCGCY | 1 cut(s) | 809 |
| BisI | GCNGC | 4 cut(s) | 16, 282, 393, 657 |
| BlsI | GCNGC | 4 cut(s) | 17, 283, 394, 658 |
| Bme1390I | CCNGG | 3 cut(s) | 469, 487, 683 |
| Bme18I | GGWCC | 3 cut(s) | 54, 737, 889 |
| BmgT120I | GGNCC | 3 cut(s) | 54, 737, 889 |
| BmiI | GGNNCC | 3 cut(s) | 56, 753, 807 |
| BmrFI | CCNGG | 3 cut(s) | 469, 487, 683 |
| BmsI | GCATC | 3 cut(s) | 137, 614, 913 |
| BoxI | GACNNNNGTC | 1 cut(s) | 708 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| Bpu10I | CCTNAGC | 1 cut(s) | 167 |
| Bsa29I | ATCGAT | 1 cut(s) | 827 |
| BsaAI | YACGTR | 1 cut(s) | 512 |
| BsaBI | GATNNNNATC | 4 cut(s) | 552, 555, 690, 833 |
| BsaHI | GRCGYC | 2 cut(s) | 29, 806 |
| BsaJI | CCNNGG | 4 cut(s) | 103, 387, 480, 706 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 32, 64, 486 |
| Bse118I | RCCGGY | 2 cut(s) | 25, 529 |
| Bse1I | ACTGG | 2 cut(s) | 329, 826 |
| Bse3DI | GCAATG | 1 cut(s) | 447 |
| Bse8I | GATNNNNATC | 4 cut(s) | 552, 555, 690, 833 |
| BseBI | CCWGG | 3 cut(s) | 469, 487, 683 |
| BseCI | ATCGAT | 1 cut(s) | 827 |
| BseDI | CCNNGG | 4 cut(s) | 103, 387, 480, 706 |
| BseGI | GGATG | 1 cut(s) | 605 |
| BseJI | GATNNNNATC | 4 cut(s) | 552, 555, 690, 833 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 32, 64, 486 |
| BseMI | GCAATG | 1 cut(s) | 447 |
| BseMII | CTCAG | 3 cut(s) | 199, 454, 467 |
| BseNI | ACTGG | 2 cut(s) | 329, 826 |
| BseXI | GCAGC | 3 cut(s) | 268, 379, 643 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| BshFI | GGCC | 6 cut(s) | 102, 275, 353, 485, 681, 726 |
| BshNI | GGYRCC | 1 cut(s) | 805 |
| BshVI | ATCGAT | 1 cut(s) | 827 |
| BsiSI | CCGG | 2 cut(s) | 26, 530 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 32, 64, 486 |
| BsmI | GAATGC | 1 cut(s) | 875 |
| BsnI | GGCC | 6 cut(s) | 102, 275, 353, 485, 681, 726 |
| Bsp143I | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| Bsp19I | CCATGG | 2 cut(s) | 103, 706 |
| BspACI | CCGC | 5 cut(s) | 15, 150, 533, 609, 654 |
| BspANI | GGCC | 6 cut(s) | 102, 275, 353, 485, 681, 726 |
| BspCNI | CTCAG | 3 cut(s) | 198, 453, 466 |
| BspDI | ATCGAT | 1 cut(s) | 827 |
| BspHI | TCATGA | 1 cut(s) | 700 |
| BspLI | GGNNCC | 3 cut(s) | 56, 753, 807 |
| BspPI | GGATC | 3 cut(s) | 645, 693, 832 |
| BspQI | GCTCTTC | 1 cut(s) | 149 |
| BspT107I | GGYRCC | 1 cut(s) | 805 |
| BsrDI | GCAATG | 1 cut(s) | 447 |
| BsrFI | RCCGGY | 2 cut(s) | 25, 529 |
| BsrI | ACTGG | 2 cut(s) | 329, 826 |
| BssAI | RCCGGY | 2 cut(s) | 25, 529 |
| BssECI | CCNNGG | 4 cut(s) | 103, 387, 480, 706 |
| BssMI | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| BssNI | GRCGYC | 2 cut(s) | 29, 806 |
| BssT1I | CCWWGG | 3 cut(s) | 103, 387, 706 |
| Bst2UI | CCWGG | 3 cut(s) | 469, 487, 683 |
| Bst4CI | ACNGT | 1 cut(s) | 585 |
| Bst6I | CTCTTC | 2 cut(s) | 57, 149 |
| BstACI | GRCGYC | 2 cut(s) | 29, 806 |
| BstBAI | YACGTR | 1 cut(s) | 512 |
| BstC8I | GCNNGC | 3 cut(s) | 113, 531, 564 |
| BstDEI | CTNAG | 4 cut(s) | 167, 185, 440, 453 |
| BstDSI | CCRYGG | 2 cut(s) | 103, 706 |
| BstF5I | GGATG | 1 cut(s) | 605 |
| BstH2I | RGCGCY | 1 cut(s) | 809 |
| BstHHI | GCGC | 2 cut(s) | 529, 808 |
| BstKTI | GATC | 5 cut(s) | 315, 653, 688, 766, 827 |
| BstMBI | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 108, 121, 156, 281, 401 |
| BstNI | CCWGG | 3 cut(s) | 469, 487, 683 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 708 |
| BstSCI | CCNGG | 3 cut(s) | 467, 485, 681 |
| BstSFI | CTRYAG | 1 cut(s) | 160 |
| BstSNI | TACGTA | 1 cut(s) | 512 |
| BstV1I | GCAGC | 3 cut(s) | 268, 379, 643 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BstX2I | RGATCY | 1 cut(s) | 650 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 134, 734 |
| BstYI | RGATCY | 1 cut(s) | 650 |
| Bsu15I | ATCGAT | 1 cut(s) | 827 |
| BsuRI | GGCC | 6 cut(s) | 102, 275, 353, 485, 681, 726 |
| BsuTUI | ATCGAT | 1 cut(s) | 827 |
| BtgI | CCRYGG | 2 cut(s) | 103, 706 |
| BtsCI | GGATG | 1 cut(s) | 605 |
| BtsI | GCAGTG | 1 cut(s) | 880 |
| BtsIMutI | CAGTG | 4 cut(s) | 461, 590, 819, 880 |
| Cac8I | GCNNGC | 3 cut(s) | 113, 531, 564 |
| CciI | TCATGA | 1 cut(s) | 700 |
| CfoI | GCGC | 2 cut(s) | 529, 808 |
| Cfr10I | RCCGGY | 2 cut(s) | 25, 529 |
| Cfr13I | GGNCC | 3 cut(s) | 54, 737, 889 |
| ClaI | ATCGAT | 1 cut(s) | 827 |
| CseI | GACGC | 1 cut(s) | 18 |
| CviAII | CATG | 9 cut(s) | 51, 104, 248, 518, 612, 631, 695, 701, 707 |
| DdeI | CTNAG | 4 cut(s) | 167, 185, 440, 453 |
| DinI | GGCGCC | 1 cut(s) | 807 |
| DpnI | GATC | 5 cut(s) | 314, 652, 687, 765, 826 |
| DpnII | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| EaeI | YGGCCR | 4 cut(s) | 100, 273, 351, 724 |
| Eam1104I | CTCTTC | 2 cut(s) | 57, 149 |
| EarI | CTCTTC | 2 cut(s) | 57, 149 |
| Eco105I | TACGTA | 1 cut(s) | 512 |
| Eco130I | CCWWGG | 3 cut(s) | 103, 387, 706 |
| Eco47I | GGWCC | 3 cut(s) | 54, 737, 889 |
| Eco57I | CTGAAG | 2 cut(s) | 81, 359 |
| EcoRII | CCWGG | 3 cut(s) | 467, 485, 681 |
| EcoT14I | CCWWGG | 3 cut(s) | 103, 387, 706 |
| EcoT22I | ATGCAT | 1 cut(s) | 519 |
| EgeI | GGCGCC | 1 cut(s) | 807 |
| EheI | GGCGCC | 1 cut(s) | 807 |
| ErhI | CCWWGG | 3 cut(s) | 103, 387, 706 |
| FaeI | CATG | 9 cut(s) | 54, 107, 251, 521, 615, 634, 698, 704, 710 |
| FatI | CATG | 9 cut(s) | 50, 103, 247, 517, 611, 630, 694, 700, 706 |
| FauI | CCCGC | 1 cut(s) | 143 |
| FbaI | TGATCA | 1 cut(s) | 763 |
| Fnu4HI | GCNGC | 4 cut(s) | 16, 282, 393, 657 |
| FokI | GGATG | 1 cut(s) | 592 |
| Fsp4HI | GCNGC | 4 cut(s) | 16, 282, 393, 657 |
| FspBI | CTAG | 4 cut(s) | 12, 575, 599, 933 |
| GlaI | GCGC | 2 cut(s) | 528, 807 |
| GluI | GCNGC | 4 cut(s) | 16, 282, 393, 657 |
| HaeII | RGCGCY | 1 cut(s) | 809 |
| HaeIII | GGCC | 6 cut(s) | 102, 275, 353, 485, 681, 726 |
| HapII | CCGG | 2 cut(s) | 26, 530 |
| HgaI | GACGC | 1 cut(s) | 18 |
| HhaI | GCGC | 2 cut(s) | 529, 808 |
| Hin1I | GRCGYC | 2 cut(s) | 29, 806 |
| Hin1II | CATG | 9 cut(s) | 54, 107, 251, 521, 615, 634, 698, 704, 710 |
| Hin6I | GCGC | 2 cut(s) | 527, 806 |
| HinP1I | GCGC | 2 cut(s) | 527, 806 |
| HinfI | GANTC | 3 cut(s) | 500, 521, 914 |
| HpaII | CCGG | 2 cut(s) | 26, 530 |
| Hpy188I | TCNGA | 4 cut(s) | 188, 339, 763, 919 |
| Hpy188III | TCNNGA | 3 cut(s) | 316, 648, 701 |
| HpyCH4III | ACNGT | 1 cut(s) | 585 |
| HpyCH4IV | ACGT | 1 cut(s) | 511 |
| HpyCH4V | TGCA | 6 cut(s) | 220, 251, 284, 410, 517, 873 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 108, 121, 156, 281, 401 |
| HpyF3I | CTNAG | 4 cut(s) | 167, 185, 440, 453 |
| HpySE526I | ACGT | 1 cut(s) | 511 |
| Hsp92I | GRCGYC | 2 cut(s) | 29, 806 |
| Hsp92II | CATG | 9 cut(s) | 54, 107, 251, 521, 615, 634, 698, 704, 710 |
| HspAI | GCGC | 2 cut(s) | 527, 806 |
| KasI | GGCGCC | 1 cut(s) | 805 |
| KroI | GCCGGC | 1 cut(s) | 529 |
| KroNI | GCCGGC | 1 cut(s) | 531 |
| Ksp22I | TGATCA | 1 cut(s) | 763 |
| Kzo9I | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| LguI | GCTCTTC | 1 cut(s) | 149 |
| LmnI | GCTCC | 1 cut(s) | 571 |
| Lsp1109I | GCAGC | 3 cut(s) | 268, 379, 643 |
| LweI | GCATC | 3 cut(s) | 137, 614, 913 |
| MaeI | CTAG | 4 cut(s) | 12, 575, 599, 933 |
| MaeII | ACGT | 1 cut(s) | 511 |
| MaeIII | GTNAC | 1 cut(s) | 373 |
| MalI | GATC | 5 cut(s) | 314, 652, 687, 765, 826 |
| MboI | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| MboII | GAAGA | 5 cut(s) | 74, 166, 236, 352, 932 |
| MflI | RGATCY | 1 cut(s) | 650 |
| MlsI | TGGCCA | 1 cut(s) | 353 |
| MluCI | AATT | 5 cut(s) | 208, 742, 770, 878, 944 |
| MluNI | TGGCCA | 1 cut(s) | 353 |
| Mly113I | GGCGCC | 1 cut(s) | 806 |
| MnlI | CCTC | 6 cut(s) | 58, 194, 195, 415, 475, 902 |
| Mox20I | TGGCCA | 1 cut(s) | 353 |
| Mph1103I | ATGCAT | 1 cut(s) | 519 |
| MreI | CGCCGGCG | 1 cut(s) | 529 |
| MroNI | GCCGGC | 1 cut(s) | 529 |
| MscI | TGGCCA | 1 cut(s) | 353 |
| MseI | TTAA | 3 cut(s) | 198, 714, 947 |
| MslI | CAYNNNNRTG | 5 cut(s) | 102, 610, 693, 699, 705 |
| Msp20I | TGGCCA | 1 cut(s) | 353 |
| MspA1I | CMGCKG | 1 cut(s) | 656 |
| MspI | CCGG | 2 cut(s) | 26, 530 |
| MspR9I | CCNGG | 3 cut(s) | 469, 487, 683 |
| Mva1269I | GAATGC | 1 cut(s) | 875 |
| MvaI | CCWGG | 3 cut(s) | 469, 487, 683 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 108, 121, 156, 281, 401 |
| NaeI | GCCGGC | 1 cut(s) | 531 |
| NarI | GGCGCC | 1 cut(s) | 806 |
| NcoI | CCATGG | 2 cut(s) | 103, 706 |
| NdeII | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| NgoMIV | GCCGGC | 1 cut(s) | 529 |
| NlaIII | CATG | 9 cut(s) | 54, 107, 251, 521, 615, 634, 698, 704, 710 |
| NlaIV | GGNNCC | 3 cut(s) | 56, 753, 807 |
| NmeAIII | GCCGAG | 1 cut(s) | 505 |
| NsiI | ATGCAT | 1 cut(s) | 519 |
| PagI | TCATGA | 1 cut(s) | 700 |
| PciSI | GCTCTTC | 1 cut(s) | 149 |
| PctI | GAATGC | 1 cut(s) | 875 |
| PdiI | GCCGGC | 1 cut(s) | 531 |
| PfeI | GAWTC | 3 cut(s) | 500, 521, 914 |
| PkrI | GCNGC | 4 cut(s) | 17, 283, 394, 658 |
| PluTI | GGCGCC | 1 cut(s) | 809 |
| Ppu21I | YACGTR | 1 cut(s) | 512 |
| PshAI | GACNNNNGTC | 1 cut(s) | 708 |
| PshBI | ATTAAT | 1 cut(s) | 947 |
| Psp6I | CCWGG | 3 cut(s) | 467, 485, 681 |
| PspGI | CCWGG | 3 cut(s) | 467, 485, 681 |
| PspN4I | GGNNCC | 3 cut(s) | 56, 753, 807 |
| PspPI | GGNCC | 3 cut(s) | 54, 737, 889 |
| PsuI | RGATCY | 1 cut(s) | 650 |
| RseI | CAYNNNNRTG | 5 cut(s) | 102, 610, 693, 699, 705 |
| SapI | GCTCTTC | 1 cut(s) | 149 |
| SaqAI | TTAA | 3 cut(s) | 198, 714, 947 |
| SatI | GCNGC | 4 cut(s) | 16, 282, 393, 657 |
| Sau3AI | GATC | 5 cut(s) | 312, 650, 685, 763, 824 |
| Sau96I | GGNCC | 3 cut(s) | 54, 737, 889 |
| ScrFI | CCNGG | 3 cut(s) | 469, 487, 683 |
| SfaNI | GCATC | 3 cut(s) | 137, 614, 913 |
| SfcI | CTRYAG | 1 cut(s) | 160 |
| SfoI | GGCGCC | 1 cut(s) | 807 |
| SgrAI | CRCCGGYG | 2 cut(s) | 25, 529 |
| SinI | GGWCC | 3 cut(s) | 54, 737, 889 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 102, 610, 693, 699, 705 |
| SnaBI | TACGTA | 1 cut(s) | 512 |
| SpeI | ACTAGT | 2 cut(s) | 574, 932 |
| Sse9I | AATT | 5 cut(s) | 208, 742, 770, 878, 944 |
| SsiI | CCGC | 5 cut(s) | 15, 150, 533, 609, 654 |
| SspDI | GGCGCC | 1 cut(s) | 805 |
| SspI | AATATT | 1 cut(s) | 857 |
| SspMI | CTAG | 4 cut(s) | 12, 575, 599, 933 |
| StyD4I | CCNGG | 3 cut(s) | 467, 485, 681 |
| StyI | CCWWGG | 3 cut(s) | 103, 387, 706 |
| TaaI | ACNGT | 1 cut(s) | 585 |
| TaiI | ACGT | 1 cut(s) | 514 |
| TaqI | TCGA | 2 cut(s) | 546, 827 |
| TaqII | GACCGA | 1 cut(s) | 839 |
| TasI | AATT | 5 cut(s) | 208, 742, 770, 878, 944 |
| TauI | GCSGC | 1 cut(s) | 18 |
| TfiI | GAWTC | 3 cut(s) | 500, 521, 914 |
| Tru1I | TTAA | 3 cut(s) | 198, 714, 947 |
| Tru9I | TTAA | 3 cut(s) | 198, 714, 947 |
| TscAI | CASTG | 4 cut(s) | 461, 590, 826, 880 |
| TseI | GCWGC | 3 cut(s) | 281, 392, 656 |
| TspDTI | ATGAA | 8 cut(s) | 39, 534, 689, 734, 810, 845, 855, 882 |
| TspRI | CASTG | 4 cut(s) | 461, 590, 826, 880 |
| VpaK11BI | GGWCC | 3 cut(s) | 54, 737, 889 |
| VspI | ATTAAT | 1 cut(s) | 947 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 254 |
| XspI | CTAG | 4 cut(s) | 12, 575, 599, 933 |
| Zsp2I | ATGCAT | 1 cut(s) | 519 |