Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000583

Physical Location & Seq

Genomic Coordinates Reverse (-)

57511322 .. 57513694

Gene Structure 2373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0443700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGCCATCTAAGAGTGAGAATTCAGATAGAAACCATAGGATGGGGGTGACGGTAATATCTCCCCATTCATTGCCACAATATTTGCATTTACAGCAGTCGATACCAAACCAGAAAGCAGTAAAAACTAGTTGTTTGCTTAGCTATGGTGGACGAGGAGGAGTCTTGCTTGGTCAAAATAACCATCCAGACCCGAGTCACCCGACCACCGTTAATAGTATCACTACTCTTCCCGCCATGAAACTTAACTCATCATCATCTAGTATTGCAGCAGAGGCAACTAGTACTGGTGCCGCGGCCGCGGCCGCCGCCGACGATGTAGTGTTGGAATTGGAGCTGGGAGAGATTAAGGACAAGTACATGAAGTGGAAGTGGAAGGGTCAGTACGCCATCAACTACATCGTTTCACATCCAGAAGATGCAAATCCGAATCCAAATGCTCCTCCTATTCTTCTTGTTCACGGCTTCGGCGCCTCCGTTCCTCACTGGCGCAGAAATATTAAGACATTGGCGAAGCATTATACAGTTTATGCAATTGACCTGATTGGCTTTGGTGCCTCAGATAAGCCGATAGGCTTTTCATATACCATGGAGAAATGGGCTGAGTTAATCTTGGATTTTTTGGATGAAGTTGTTCAGAAGCCTACTGTTTTGATAGGCAACTCTGTGGGAAGCCTTGCATGTGTAATCTCTGCCTCAGAATCTAAAAAGGGACTGGTTCGAGGGCTAGTGCTTTTAAATTGCTCTGGTGGGATGAATAACAAGGCCATTGTTGATGATTGGAGGATCAAGCTGCTCTTCCCTTTGCTCTTGCTAATCGATTTCTTGTTGAAGCAACGACCTATTGCTTCCTTCATTTTTGAGCGTGTTAGACAGAGGGAAAGTTTAAGAAATATCTTATCATCTGTTTACGCCAACAAAGAATCTGTGGATGACGAATTAGTAGAGATCATAATGGAACCAACAAGTGACCCAGGTGCACTGGACGCGTTTGTCTCAATCGTAACAGGGCCACCAGGACCAAACCCGGTCCAGTTAATGCCAGGCCTCTCCCTACCGATTCTAGTCCTATGGGGCGATGAAGACCCGTTCACTCCACTCGATGGGCCTGTTGGCAAATACTTCACTTCCTTACCTTCTCAGAAATCGAATGTGAGCCTCTCCATTTTACAAGGAGTTGGGCACTGCCCCCACGATGACAGGCCCAAGTTGGTCCACGACAAACTTCTTGCCTGGTTGGATAATCTTTCTATAGAAAATCCAGTTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

422

Amino Acids

45.97

Weight (kDa)

6.18

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Abhydrolase_1	PF00561	147 - 401	2e-25	alpha/beta hydrolase fold
Abhydrolase_6	PF12697	149 - 405	2.6e-21	Alpha/beta hydrolase family
Hydrolase_4	PF12146	149 - 399	3.1e-10	Serine aminopeptidase, S33

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01140 AT3G01140 AT5G15310 AT5G15310 AT5G15310 AT5G15310
fragaria_vesca	FvH4_4g31000 FvH4_5g14660 FvH4_5g14661 FvH4_6g48110
malus_domestica	MD00G1081800.v1.1 MD06G1196400.v1.1 MD06G1196500.v1.1 MD09G1054000.v1.1 MD14G1203200.v1.1 MD16G1069000.v1.1 MD17G1051700.v1.1
prunus_persica	Prupe.1G278200_v2.0.a1 Prupe.3G264500_v2.0.a1 Prupe.5G196100_v2.0.a1 Prupe.5G196100_v2.0.a1
pyrus_communis	pycom06g17330 pycom06g17350 pycom111g04520 pycom14g16820 pycom17g04890
rosa_chinensis	RchiOBHm_Chr2g0167441 RchiOBHm_Chr3g0485421 RchiOBHm_Chr4g0439371 RchiOBHm_Chr7g0181801 RchiOBHm_Chr7g0181821
rosa_laevigata	RLG00000005171 RLG00000021717 RLG00000023151
rosa_multiflora	Rmu_co8449019.1_g000001 Rmu_sc0000168.1_g000002 Rmu_sc0001120.1_g000006 Rmu_sc0001206.1_g000043 Rmu_sc0004898.1_g000006 Rmu_sc0005291.1_g000001 Rmu_sc0009036.1_g000001 Rmu_sc0010132.1_g000030 Rmu_sc0014780.1_g000004 Rmu_sc0028983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259110 Rroxscaffold_3G00271720 Rroxscaffold_5G00380300 Rroxscaffold_6G00397030
rosa_rugosa	Rorug02G0530400 Rorug03G0218000 Rorug04G0317800 Rorug06G0443600 Rorug06G0443700 Rorug06G0443900 Rorug06G0444100 Rorug06G0444300
rosa_samantha	Rh2AG597400 Rh2BG608800 Rh2CG579600 Rh2DG620000 Rh3AG267600 Rh3BG303000 Rh3DG296900 Rh3DG297800 Rh3DG298200 Rh4AG368900 Rh4BG380700 Rh4CG395200 Rh4DG375500 Rh7AG046200 Rh7AG046400 Rh7CG046500
rosa_wichuraiana	Rw2G049710 Rw3G023700 Rw3G023800 Rw3G023810 Rw3G023860 Rw3G023870 Rw4G031470 Rw7G003820 Rw7G003840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	989
AccB1I	GGYRCC	3 cut(s)	287, 467, 551
AccB7I	CCANNNNNTGG	2 cut(s)	40, 1100
AccII	CGCG	3 cut(s)	293, 299, 986
AciI	CCGC	7 cut(s)	231, 291, 293, 297, 299, 303, 306
AclWI	GGATC	1 cut(s)	791
AcoI	YGGCCR	2 cut(s)	294, 300
AcsI	RAATTY	1 cut(s)	19
AcyI	GRCGYC	1 cut(s)	468
AfaI	GTAC	3 cut(s)	283, 356, 383
AfiI	CCNNNNNNNGG	2 cut(s)	40, 1100
AflIII	ACRYGT	1 cut(s)	984
AgsI	TTSAA	1 cut(s)	829
AhlI	ACTAGT	2 cut(s)	125, 278
AjnI	CCWGG	4 cut(s)	970, 1012, 1039, 1229
AluBI	AGCT	3 cut(s)	141, 334, 790
AluI	AGCT	3 cut(s)	141, 334, 790
Alw21I	GWGCWC	1 cut(s)	979
Alw26I	GTCTC	1 cut(s)	997
Alw44I	GTGCAC	1 cut(s)	975
AlwI	GGATC	1 cut(s)	791
Ama87I	CYCGRG	1 cut(s)	190
AoxI	GGCC	7 cut(s)	294, 300, 762, 1007, 1042, 1103, 1199
ApaLI	GTGCAC	1 cut(s)	975
ApeKI	GCWGC	2 cut(s)	266, 790
ApoI	RAATTY	1 cut(s)	19
Asp700I	GAANNNNTTC	1 cut(s)	630
AspLEI	GCGC	2 cut(s)	470, 489
AspS9I	GGNCC	6 cut(s)	1007, 1016, 1027, 1103, 1200, 1210
AsuC2I	CCSGG	1 cut(s)	1025
AsuHPI	GGTGA	2 cut(s)	58, 188
AvaI	CYCGRG	1 cut(s)	190
AvaII	GGWCC	3 cut(s)	1016, 1027, 1210
BaeGI	GKGCMC	2 cut(s)	979, 1182
BanI	GGYRCC	3 cut(s)	287, 467, 551
BarI	GAAGNNNNNNTAC	2 cut(s)	365, 397
BbsI	GAAGAC	1 cut(s)	1086
Bbv12I	GWGCWC	1 cut(s)	979
BbvI	GCAGC	2 cut(s)	278, 777
BccI	CCATC	5 cut(s)	13, 34, 189, 395, 1094
BceAI	ACGGC	1 cut(s)	475
BciT130I	CCWGG	4 cut(s)	972, 1014, 1041, 1231
BcnI	CCSGG	1 cut(s)	1025
BcoDI	GTCTC	1 cut(s)	997
BcuI	ACTAGT	2 cut(s)	125, 278
BfaI	CTAG	5 cut(s)	126, 258, 279, 725, 1061
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	1 cut(s)	471
BisI	GCNGC	8 cut(s)	267, 291, 294, 297, 300, 303, 306, 791
BlpI	GCTNAGC	1 cut(s)	137
BlsI	GCNGC	8 cut(s)	268, 292, 295, 298, 301, 304, 307, 792
BmcAI	AGTACT	1 cut(s)	283
Bme1390I	CCNGG	5 cut(s)	972, 1014, 1025, 1041, 1231
Bme18I	GGWCC	3 cut(s)	1016, 1027, 1210
BmeT110I	CYCGRG	1 cut(s)	190
BmgT120I	GGNCC	6 cut(s)	1007, 1016, 1027, 1103, 1200, 1210
BmiI	GGNNCC	4 cut(s)	289, 469, 553, 957
BmrFI	CCNGG	5 cut(s)	972, 1014, 1025, 1041, 1231
BmsI	GCATC	1 cut(s)	406
BoxI	GACNNNNGTC	1 cut(s)	192
BpiI	GAAGAC	1 cut(s)	1086
Bpu1102I	GCTNAGC	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	1025
Bsa29I	ATCGAT	1 cut(s)	816
BsaBI	GATNNNNATC	1 cut(s)	420
BsaHI	GRCGYC	1 cut(s)	468
BsaJI	CCNNGG	4 cut(s)	291, 297, 585, 970
Bsc4I	CCNNNNNNNGG	2 cut(s)	40, 1100
Bse1I	ACTGG	6 cut(s)	289, 488, 717, 984, 1030, 1259
Bse3DI	GCAATG	1 cut(s)	68
Bse8I	GATNNNNATC	1 cut(s)	420
BseBI	CCWGG	4 cut(s)	972, 1014, 1041, 1231
BseCI	ATCGAT	1 cut(s)	816
BseDI	CCNNGG	4 cut(s)	291, 297, 585, 970
BseGI	GGATG	6 cut(s)	45, 181, 406, 628, 756, 934
BseJI	GATNNNNATC	1 cut(s)	420
BseLI	CCNNNNNNNGG	2 cut(s)	40, 1100
BseMI	GCAATG	1 cut(s)	68
BseMII	CTCAG	4 cut(s)	570, 591, 708, 1151
BseNI	ACTGG	6 cut(s)	289, 488, 717, 984, 1030, 1259
BseRI	GAGGAG	3 cut(s)	168, 171, 429
BseSI	GKGCMC	2 cut(s)	979, 1182
BseX3I	CGGCCG	2 cut(s)	294, 300
BseXI	GCAGC	2 cut(s)	278, 777
BseYI	CCCAGC	1 cut(s)	334
Bsh1236I	CGCG	3 cut(s)	293, 299, 986
Bsh1285I	CGRYCG	2 cut(s)	297, 303
BshFI	GGCC	7 cut(s)	296, 302, 764, 1009, 1044, 1105, 1201
BshNI	GGYRCC	3 cut(s)	287, 467, 551
BshVI	ATCGAT	1 cut(s)	816
BsiEI	CGRYCG	2 cut(s)	297, 303
BsiHKAI	GWGCWC	1 cut(s)	979
BsiHKCI	CYCGRG	1 cut(s)	190
BsiSI	CCGG	1 cut(s)	1025
BslFI	GGGAC	1 cut(s)	723
BslI	CCNNNNNNNGG	2 cut(s)	40, 1100
BsmAI	GTCTC	1 cut(s)	997
BsmFI	GGGAC	1 cut(s)	723
BsnI	GGCC	7 cut(s)	296, 302, 764, 1009, 1044, 1105, 1201
BsoBI	CYCGRG	1 cut(s)	190
Bsp1286I	GDGCHC	2 cut(s)	979, 1182
Bsp143I	GATC	2 cut(s)	783, 945
Bsp1720I	GCTNAGC	1 cut(s)	137
Bsp19I	CCATGG	1 cut(s)	585
BspACI	CCGC	7 cut(s)	231, 291, 293, 297, 299, 303, 306
BspANI	GGCC	7 cut(s)	296, 302, 764, 1009, 1044, 1105, 1201
BspCNI	CTCAG	4 cut(s)	569, 592, 707, 1150
BspDI	ATCGAT	1 cut(s)	816
BspFNI	CGCG	3 cut(s)	293, 299, 986
BspLI	GGNNCC	4 cut(s)	289, 469, 553, 957
BspPI	GGATC	1 cut(s)	791
BspQI	GCTCTTC	1 cut(s)	800
BspT107I	GGYRCC	3 cut(s)	287, 467, 551
BsrDI	GCAATG	1 cut(s)	68
BsrI	ACTGG	6 cut(s)	289, 488, 717, 984, 1030, 1259
BssECI	CCNNGG	4 cut(s)	291, 297, 585, 970
BssMI	GATC	2 cut(s)	783, 945
BssNI	GRCGYC	1 cut(s)	468
BssT1I	CCWWGG	1 cut(s)	585
Bst2UI	CCWGG	4 cut(s)	972, 1014, 1041, 1231
Bst4CI	ACNGT	4 cut(s)	52, 208, 523, 646
Bst6I	CTCTTC	2 cut(s)	231, 800
BstACI	GRCGYC	1 cut(s)	468
BstDEI	CTNAG	6 cut(s)	9, 137, 556, 600, 694, 1137
BstDSI	CCRYGG	3 cut(s)	291, 297, 585
BstF5I	GGATG	6 cut(s)	45, 181, 406, 628, 756, 934
BstFNI	CGCG	3 cut(s)	293, 299, 986
BstH2I	RGCGCY	1 cut(s)	471
BstHHI	GCGC	2 cut(s)	470, 489
BstKTI	GATC	2 cut(s)	786, 948
BstMAI	GTCTC	1 cut(s)	997
BstMBI	GATC	2 cut(s)	783, 945
BstMCI	CGRYCG	2 cut(s)	297, 303
BstMWI	GCNNNNNNNGC	7 cut(s)	91, 272, 296, 299, 302, 305, 983
BstNI	CCWGG	4 cut(s)	972, 1014, 1041, 1231
BstNSI	RCATGY	1 cut(s)	681
BstPAI	GACNNNNGTC	1 cut(s)	192
BstSCI	CCNGG	5 cut(s)	970, 1012, 1023, 1039, 1229
BstSFI	CTRYAG	1 cut(s)	1248
BstSLI	GKGCMC	2 cut(s)	979, 1182
BstUI	CGCG	3 cut(s)	293, 299, 986
BstV1I	GCAGC	2 cut(s)	278, 777
BstV2I	GAAGAC	1 cut(s)	1086
BstZI	CGGCCG	2 cut(s)	294, 300
Bsu15I	ATCGAT	1 cut(s)	816
BsuRI	GGCC	7 cut(s)	296, 302, 764, 1009, 1044, 1105, 1201
BsuTUI	ATCGAT	1 cut(s)	816
BtgI	CCRYGG	3 cut(s)	291, 297, 585
BtgZI	GCGATG	1 cut(s)	1089
BtsCI	GGATG	6 cut(s)	45, 181, 406, 628, 756, 934
BtsI	GCAGTG	1 cut(s)	1180
BtsIMutI	CAGTG	3 cut(s)	481, 977, 1180
CciNI	GCGGCCGC	2 cut(s)	294, 300
CfoI	GCGC	2 cut(s)	470, 489
Cfr13I	GGNCC	6 cut(s)	1007, 1016, 1027, 1103, 1200, 1210
Cfr42I	CCGCGG	2 cut(s)	294, 300
ClaI	ATCGAT	1 cut(s)	816
CseI	GACGC	1 cut(s)	992
Csp6I	GTAC	3 cut(s)	282, 355, 382
CspCI	CAANNNNNGTGG	2 cut(s)	63, 98
CviAII	CATG	4 cut(s)	235, 358, 586, 678
CviQI	GTAC	3 cut(s)	282, 355, 382
DdeI	CTNAG	6 cut(s)	9, 137, 556, 600, 694, 1137
DinI	GGCGCC	1 cut(s)	469
DpnI	GATC	2 cut(s)	785, 947
DpnII	GATC	2 cut(s)	783, 945
DraI	TTTAAA	1 cut(s)	735
DrdI	GACNNNNNNGTC	1 cut(s)	989
DseDI	GACNNNNNNGTC	1 cut(s)	989
EaeI	YGGCCR	2 cut(s)	294, 300
EagI	CGGCCG	2 cut(s)	294, 300
Eam1104I	CTCTTC	2 cut(s)	231, 800
EarI	CTCTTC	2 cut(s)	231, 800
EclXI	CGGCCG	2 cut(s)	294, 300
Eco130I	CCWWGG	1 cut(s)	585
Eco147I	AGGCCT	1 cut(s)	1044
Eco47I	GGWCC	3 cut(s)	1016, 1027, 1210
Eco52I	CGGCCG	2 cut(s)	294, 300
Eco88I	CYCGRG	1 cut(s)	190
EcoRI	GAATTC	1 cut(s)	19
EcoRII	CCWGG	4 cut(s)	970, 1012, 1039, 1229
EcoT14I	CCWWGG	1 cut(s)	585
EgeI	GGCGCC	1 cut(s)	469
EheI	GGCGCC	1 cut(s)	469
ErhI	CCWWGG	1 cut(s)	585
FaeI	CATG	4 cut(s)	238, 361, 589, 681
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	1 cut(s)	723
FatI	CATG	4 cut(s)	234, 357, 585, 677
FauI	CCCGC	1 cut(s)	238
Fnu4HI	GCNGC	8 cut(s)	267, 291, 294, 297, 300, 303, 306, 791
FokI	GGATG	6 cut(s)	52, 168, 393, 635, 763, 941
Fsp4HI	GCNGC	8 cut(s)	267, 291, 294, 297, 300, 303, 306, 791
FspBI	CTAG	5 cut(s)	126, 258, 279, 725, 1061
GlaI	GCGC	2 cut(s)	469, 488
GluI	GCNGC	8 cut(s)	267, 291, 294, 297, 300, 303, 306, 791
GsaI	CCCAGC	1 cut(s)	338
HaeII	RGCGCY	1 cut(s)	471
HaeIII	GGCC	7 cut(s)	296, 302, 764, 1009, 1044, 1105, 1201
HapII	CCGG	1 cut(s)	1025
HgaI	GACGC	1 cut(s)	992
HhaI	GCGC	2 cut(s)	470, 489
Hin1I	GRCGYC	1 cut(s)	468
Hin1II	CATG	4 cut(s)	238, 361, 589, 681
Hin6I	GCGC	2 cut(s)	468, 487
HinP1I	GCGC	2 cut(s)	468, 487
HinfI	GANTC	6 cut(s)	159, 193, 427, 698, 920, 1057
HpaII	CCGG	1 cut(s)	1025
HphI	GGTGA	2 cut(s)	58, 188
Hpy166II	GTNNAC	6 cut(s)	149, 457, 907, 977, 1089, 1213
Hpy188I	TCNGA	6 cut(s)	25, 426, 559, 636, 697, 1140
Hpy188III	TCNNGA	2 cut(s)	185, 410
Hpy8I	GTNNAC	6 cut(s)	149, 457, 907, 977, 1089, 1213
Hpy99I	CGWCG	1 cut(s)	314
HpyAV	CCTTC	3 cut(s)	367, 859, 1143
HpyCH4III	ACNGT	4 cut(s)	52, 208, 523, 646
HpyCH4V	TGCA	6 cut(s)	85, 266, 419, 530, 677, 977
HpyF10VI	GCNNNNNNNGC	7 cut(s)	91, 272, 296, 299, 302, 305, 983
HpyF3I	CTNAG	6 cut(s)	9, 137, 556, 600, 694, 1137
Hsp92I	GRCGYC	1 cut(s)	468
Hsp92II	CATG	4 cut(s)	238, 361, 589, 681
HspAI	GCGC	2 cut(s)	468, 487
KasI	GGCGCC	1 cut(s)	467
KspI	CCGCGG	2 cut(s)	294, 300
Kzo9I	GATC	2 cut(s)	783, 945
LguI	GCTCTTC	1 cut(s)	800
LmnI	GCTCC	2 cut(s)	331, 442
Lsp1109I	GCAGC	2 cut(s)	278, 777
LweI	GCATC	1 cut(s)	406
MaeI	CTAG	5 cut(s)	126, 258, 279, 725, 1061
MaeIII	GTNAC	4 cut(s)	46, 194, 965, 1000
MalI	GATC	2 cut(s)	785, 947
MboI	GATC	2 cut(s)	783, 945
MboII	GAAGA	5 cut(s)	218, 425, 440, 787, 1091
MfeI	CAATTG	1 cut(s)	531
MhlI	GDGCHC	2 cut(s)	979, 1182
MluCI	AATT	5 cut(s)	19, 326, 531, 736, 935
MluI	ACGCGT	1 cut(s)	984
Mly113I	GGCGCC	1 cut(s)	468
MlyI	GAGTC	2 cut(s)	168, 202
MmeI	TCCRAC	2 cut(s)	303, 1215
MroXI	GAANNNNTTC	1 cut(s)	630
MseI	TTAA	8 cut(s)	210, 243, 345, 498, 605, 734, 884, 1034
MspA1I	CMGCKG	2 cut(s)	293, 299
MspI	CCGG	1 cut(s)	1025
MspR9I	CCNGG	5 cut(s)	972, 1014, 1025, 1041, 1231
MunI	CAATTG	1 cut(s)	531
MvaI	CCWGG	4 cut(s)	972, 1014, 1041, 1231
MvnI	CGCG	3 cut(s)	293, 299, 986
MwoI	GCNNNNNNNGC	7 cut(s)	91, 272, 296, 299, 302, 305, 983
NarI	GGCGCC	1 cut(s)	468
NciI	CCSGG	1 cut(s)	1025
NcoI	CCATGG	1 cut(s)	585
NdeII	GATC	2 cut(s)	783, 945
NlaIII	CATG	4 cut(s)	238, 361, 589, 681
NlaIV	GGNNCC	4 cut(s)	289, 469, 553, 957
NmuCI	GTSAC	3 cut(s)	46, 194, 965
NotI	GCGGCCGC	2 cut(s)	294, 300
NspI	RCATGY	1 cut(s)	681
PceI	AGGCCT	1 cut(s)	1044
PciSI	GCTCTTC	1 cut(s)	800
PcsI	WCGNNNNNNNCGW	1 cut(s)	471
PdmI	GAANNNNTTC	1 cut(s)	630
PfeI	GAWTC	4 cut(s)	427, 698, 920, 1057
PflMI	CCANNNNNTGG	2 cut(s)	40, 1100
PkrI	GCNGC	8 cut(s)	268, 292, 295, 298, 301, 304, 307, 792
PleI	GAGTC	2 cut(s)	167, 201
PluTI	GGCGCC	1 cut(s)	471
PpsI	GAGTC	2 cut(s)	167, 201
PshAI	GACNNNNGTC	1 cut(s)	192
Psp6I	CCWGG	4 cut(s)	970, 1012, 1039, 1229
PspFI	CCCAGC	1 cut(s)	334
PspGI	CCWGG	4 cut(s)	970, 1012, 1039, 1229
PspN4I	GGNNCC	4 cut(s)	289, 469, 553, 957
PspPI	GGNCC	6 cut(s)	1007, 1016, 1027, 1103, 1200, 1210
RsaI	GTAC	3 cut(s)	283, 356, 383
RsaNI	GTAC	3 cut(s)	282, 355, 382
SacII	CCGCGG	2 cut(s)	294, 300
SapI	GCTCTTC	1 cut(s)	800
SaqAI	TTAA	8 cut(s)	210, 243, 345, 498, 605, 734, 884, 1034
SatI	GCNGC	8 cut(s)	267, 291, 294, 297, 300, 303, 306, 791
Sau3AI	GATC	2 cut(s)	783, 945
Sau96I	GGNCC	6 cut(s)	1007, 1016, 1027, 1103, 1200, 1210
ScaI	AGTACT	1 cut(s)	283
SchI	GAGTC	2 cut(s)	168, 202
ScrFI	CCNGG	5 cut(s)	972, 1014, 1025, 1041, 1231
SduI	GDGCHC	2 cut(s)	979, 1182
SetI	ASST	7 cut(s)	143, 336, 540, 792, 841, 976, 1135
SfaNI	GCATC	1 cut(s)	406
SfcI	CTRYAG	1 cut(s)	1248
SfoI	GGCGCC	1 cut(s)	469
Sfr303I	CCGCGG	2 cut(s)	294, 300
SgrBI	CCGCGG	2 cut(s)	294, 300
SinI	GGWCC	3 cut(s)	1016, 1027, 1210
SpeI	ACTAGT	2 cut(s)	125, 278
Sse9I	AATT	5 cut(s)	19, 326, 531, 736, 935
SseBI	AGGCCT	1 cut(s)	1044
SsiI	CCGC	7 cut(s)	231, 291, 293, 297, 299, 303, 306
SspDI	GGCGCC	1 cut(s)	467
SspI	AATATT	2 cut(s)	80, 496
SspMI	CTAG	5 cut(s)	126, 258, 279, 725, 1061
StuI	AGGCCT	1 cut(s)	1044
StyD4I	CCNGG	5 cut(s)	970, 1012, 1023, 1039, 1229
StyI	CCWWGG	1 cut(s)	585
TaaI	ACNGT	4 cut(s)	52, 208, 523, 646
TaqI	TCGA	5 cut(s)	98, 718, 816, 1098, 1145
TasI	AATT	5 cut(s)	19, 326, 531, 736, 935
TatI	WGTACW	2 cut(s)	281, 354
TauI	GCSGC	6 cut(s)	293, 296, 299, 302, 305, 308
TfiI	GAWTC	4 cut(s)	427, 698, 920, 1057
Tru1I	TTAA	8 cut(s)	210, 243, 345, 498, 605, 734, 884, 1034
Tru9I	TTAA	8 cut(s)	210, 243, 345, 498, 605, 734, 884, 1034
TscAI	CASTG	3 cut(s)	488, 984, 1187
TseFI	GTSAC	3 cut(s)	46, 194, 965
TseI	GCWGC	2 cut(s)	266, 790
Tsp45I	GTSAC	3 cut(s)	46, 194, 965
TspDTI	ATGAA	8 cut(s)	57, 251, 374, 567, 639, 767, 841, 1092
TspGWI	ACGGA	1 cut(s)	463
TspRI	CASTG	3 cut(s)	488, 984, 1187
Van91I	CCANNNNNTGG	2 cut(s)	40, 1100
VneI	GTGCAC	1 cut(s)	975
VpaK11BI	GGWCC	3 cut(s)	1016, 1027, 1210
XapI	RAATTY	1 cut(s)	19
XceI	RCATGY	1 cut(s)	681
XmnI	GAANNNNTTC	1 cut(s)	630
XspI	CTAG	5 cut(s)	126, 258, 279, 725, 1061
ZrmI	AGTACT	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.