transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 14 - 61 | 3.3e-16 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 17 - 77 | 4e-12 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 67 - 112 | 1.2e-17 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 70 - 116 | 1.5e-08 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 676 |
| AccB1I | GGYRCC | 1 cut(s) | 676 |
| AccI | GTMKAC | 1 cut(s) | 160 |
| AciI | CCGC | 7 cut(s) | 432, 554, 558, 563, 566, 929, 1002 |
| AclWI | GGATC | 2 cut(s) | 359, 939 |
| AcoI | YGGCCR | 2 cut(s) | 97, 555 |
| AcsI | RAATTY | 3 cut(s) | 206, 1081, 1090 |
| AcuI | CTGAAG | 2 cut(s) | 122, 717 |
| AcyI | GRCGYC | 1 cut(s) | 393 |
| AfaI | GTAC | 3 cut(s) | 678, 789, 795 |
| AfeI | AGCGCT | 1 cut(s) | 344 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 486 |
| AgsI | TTSAA | 3 cut(s) | 239, 476, 579 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 418 |
| AjnI | CCWGG | 2 cut(s) | 467, 679 |
| AluBI | AGCT | 7 cut(s) | 73, 131, 156, 508, 538, 551, 596 |
| AluI | AGCT | 7 cut(s) | 73, 131, 156, 508, 538, 551, 596 |
| Alw26I | GTCTC | 2 cut(s) | 178, 639 |
| AlwI | GGATC | 2 cut(s) | 359, 939 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 551 |
| Aor51HI | AGCGCT | 1 cut(s) | 344 |
| AoxI | GGCC | 3 cut(s) | 97, 555, 847 |
| ApeKI | GCWGC | 6 cut(s) | 548, 551, 560, 569, 572, 912 |
| ApoI | RAATTY | 3 cut(s) | 206, 1081, 1090 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 497, 529 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 888 |
| Asp718I | GGTACC | 1 cut(s) | 676 |
| AspLEI | GCGC | 2 cut(s) | 345, 467 |
| AspS9I | GGNCC | 1 cut(s) | 44 |
| AsuC2I | CCSGG | 2 cut(s) | 487, 1033 |
| AsuHPI | GGTGA | 5 cut(s) | 3, 643, 749, 1019, 1099 |
| AvaII | GGWCC | 1 cut(s) | 44 |
| BalI | TGGCCA | 1 cut(s) | 99 |
| BanI | GGYRCC | 1 cut(s) | 676 |
| BanII | GRGCYC | 1 cut(s) | 118 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 771, 803 |
| BbsI | GAAGAC | 1 cut(s) | 69 |
| BbvCI | CCTCAGC | 1 cut(s) | 544 |
| BbvI | GCAGC | 6 cut(s) | 538, 547, 556, 559, 560, 924 |
| BccI | CCATC | 2 cut(s) | 162, 989 |
| BceAI | ACGGC | 3 cut(s) | 676, 771, 811 |
| BciT130I | CCWGG | 2 cut(s) | 469, 681 |
| BclI | TGATCA | 3 cut(s) | 739, 748, 979 |
| BcnI | CCSGG | 2 cut(s) | 487, 1033 |
| BcoDI | GTCTC | 2 cut(s) | 178, 639 |
| BfaI | CTAG | 1 cut(s) | 809 |
| BfmI | CTRYAG | 1 cut(s) | 157 |
| BfoI | RGCGCY | 2 cut(s) | 346, 468 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 563 |
| BlpI | GCTNAGC | 1 cut(s) | 346 |
| Bme1390I | CCNGG | 4 cut(s) | 469, 487, 681, 1033 |
| Bme18I | GGWCC | 1 cut(s) | 44 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 418 |
| BmgT120I | GGNCC | 1 cut(s) | 44 |
| BmiI | GGNNCC | 1 cut(s) | 678 |
| BmrFI | CCNGG | 4 cut(s) | 469, 487, 681, 1033 |
| BpiI | GAAGAC | 1 cut(s) | 69 |
| BpmI | CTGGAG | 1 cut(s) | 39 |
| Bpu10I | CCTNAGC | 1 cut(s) | 544 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 346 |
| BpuEI | CTTGAG | 2 cut(s) | 320, 650 |
| BpuMI | CCSGG | 2 cut(s) | 487, 1033 |
| Bsa29I | ATCGAT | 1 cut(s) | 363 |
| BsaBI | GATNNNNATC | 1 cut(s) | 978 |
| BsaHI | GRCGYC | 1 cut(s) | 393 |
| BsaI | GGTCTC | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 3 cut(s) | 47, 100, 680 |
| BsaWI | WCCGGW | 3 cut(s) | 367, 510, 722 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 486 |
| Bse1I | ACTGG | 2 cut(s) | 326, 1070 |
| Bse8I | GATNNNNATC | 1 cut(s) | 978 |
| BseBI | CCWGG | 2 cut(s) | 469, 681 |
| BseCI | ATCGAT | 1 cut(s) | 363 |
| BseDI | CCNNGG | 3 cut(s) | 47, 100, 680 |
| BseGI | GGATG | 2 cut(s) | 584, 1000 |
| BseJI | GATNNNNATC | 1 cut(s) | 978 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 486 |
| BseMII | CTCAG | 6 cut(s) | 155, 173, 454, 467, 558, 657 |
| BseNI | ACTGG | 2 cut(s) | 326, 1070 |
| BseX3I | CGGCCG | 1 cut(s) | 555 |
| BseXI | GCAGC | 6 cut(s) | 538, 547, 556, 559, 560, 924 |
| BseYI | CCCAGC | 1 cut(s) | 131 |
| Bsh1285I | CGRYCG | 2 cut(s) | 515, 558 |
| BshFI | GGCC | 3 cut(s) | 99, 557, 849 |
| BshNI | GGYRCC | 1 cut(s) | 676 |
| BshVI | ATCGAT | 1 cut(s) | 363 |
| BsiEI | CGRYCG | 2 cut(s) | 515, 558 |
| BsiSI | CCGG | 5 cut(s) | 368, 487, 511, 723, 1032 |
| BslFI | GGGAC | 1 cut(s) | 797 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 486 |
| BsmAI | GTCTC | 2 cut(s) | 178, 639 |
| BsmFI | GGGAC | 1 cut(s) | 797 |
| BsnI | GGCC | 3 cut(s) | 99, 557, 849 |
| Bso31I | GGTCTC | 1 cut(s) | 178 |
| Bsp1286I | GDGCHC | 1 cut(s) | 118 |
| Bsp143I | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 346 |
| Bsp19I | CCATGG | 1 cut(s) | 100 |
| BspACI | CCGC | 7 cut(s) | 432, 554, 558, 563, 566, 929, 1002 |
| BspANI | GGCC | 3 cut(s) | 99, 557, 849 |
| BspCNI | CTCAG | 6 cut(s) | 156, 174, 453, 466, 557, 658 |
| BspDI | ATCGAT | 1 cut(s) | 363 |
| BspHI | TCATGA | 5 cut(s) | 612, 745, 853, 895, 1105 |
| BspLI | GGNNCC | 1 cut(s) | 678 |
| BspPI | GGATC | 2 cut(s) | 359, 939 |
| BspT107I | GGYRCC | 1 cut(s) | 676 |
| BspTNI | GGTCTC | 1 cut(s) | 178 |
| BsrI | ACTGG | 2 cut(s) | 326, 1070 |
| BssECI | CCNNGG | 3 cut(s) | 47, 100, 680 |
| BssMI | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| BssNI | GRCGYC | 1 cut(s) | 393 |
| BssT1I | CCWWGG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 2 cut(s) | 469, 681 |
| Bst4CI | ACNGT | 4 cut(s) | 15, 416, 1022, 1073 |
| Bst6I | CTCTTC | 1 cut(s) | 287 |
| BstACI | GRCGYC | 1 cut(s) | 393 |
| BstDEI | CTNAG | 8 cut(s) | 164, 182, 253, 346, 440, 453, 544, 666 |
| BstDSI | CCRYGG | 2 cut(s) | 47, 100 |
| BstEII | GGTNACC | 2 cut(s) | 9, 370 |
| BstF5I | GGATG | 2 cut(s) | 584, 1000 |
| BstH2I | RGCGCY | 2 cut(s) | 346, 468 |
| BstHHI | GCGC | 2 cut(s) | 345, 467 |
| BstKTI | GATC | 7 cut(s) | 367, 742, 751, 901, 934, 976, 982 |
| BstMAI | GTCTC | 2 cut(s) | 178, 639 |
| BstMBI | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| BstMCI | CGRYCG | 2 cut(s) | 515, 558 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 514, 554, 557, 560, 563, 566, 569, 572 |
| BstNI | CCWGG | 2 cut(s) | 469, 681 |
| BstPI | GGTNACC | 2 cut(s) | 9, 370 |
| BstSCI | CCNGG | 4 cut(s) | 467, 485, 679, 1031 |
| BstSFI | CTRYAG | 1 cut(s) | 157 |
| BstV1I | GCAGC | 6 cut(s) | 538, 547, 556, 559, 560, 924 |
| BstV2I | GAAGAC | 1 cut(s) | 69 |
| BstZI | CGGCCG | 1 cut(s) | 555 |
| Bsu15I | ATCGAT | 1 cut(s) | 363 |
| BsuRI | GGCC | 3 cut(s) | 99, 557, 849 |
| BsuTUI | ATCGAT | 1 cut(s) | 363 |
| BtgI | CCRYGG | 2 cut(s) | 47, 100 |
| BtsCI | GGATG | 2 cut(s) | 584, 1000 |
| BtsIMutI | CAGTG | 1 cut(s) | 461 |
| CaiI | CAGNNNCTG | 1 cut(s) | 551 |
| CciI | TCATGA | 5 cut(s) | 612, 745, 853, 895, 1105 |
| CciNI | GCGGCCGC | 1 cut(s) | 555 |
| CfoI | GCGC | 2 cut(s) | 345, 467 |
| Cfr13I | GGNCC | 1 cut(s) | 44 |
| ClaI | ATCGAT | 1 cut(s) | 363 |
| CseI | GACGC | 1 cut(s) | 401 |
| Csp6I | GTAC | 3 cut(s) | 677, 788, 794 |
| CviQI | GTAC | 3 cut(s) | 677, 788, 794 |
| DdeI | CTNAG | 8 cut(s) | 164, 182, 253, 346, 440, 453, 544, 666 |
| DpnI | GATC | 7 cut(s) | 366, 741, 750, 900, 933, 975, 981 |
| DpnII | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| DriI | GACNNNNNGTC | 1 cut(s) | 418 |
| EaeI | YGGCCR | 2 cut(s) | 97, 555 |
| EagI | CGGCCG | 1 cut(s) | 555 |
| Eam1104I | CTCTTC | 1 cut(s) | 287 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 418 |
| EarI | CTCTTC | 1 cut(s) | 287 |
| EciI | GGCGGA | 1 cut(s) | 944 |
| EclXI | CGGCCG | 1 cut(s) | 555 |
| Eco130I | CCWWGG | 1 cut(s) | 100 |
| Eco24I | GRGCYC | 1 cut(s) | 118 |
| Eco31I | GGTCTC | 1 cut(s) | 178 |
| Eco47I | GGWCC | 1 cut(s) | 44 |
| Eco47III | AGCGCT | 1 cut(s) | 344 |
| Eco52I | CGGCCG | 1 cut(s) | 555 |
| Eco57I | CTGAAG | 2 cut(s) | 122, 717 |
| Eco91I | GGTNACC | 2 cut(s) | 9, 370 |
| EcoO65I | GGTNACC | 2 cut(s) | 9, 370 |
| EcoRI | GAATTC | 1 cut(s) | 1090 |
| EcoRII | CCWGG | 2 cut(s) | 467, 679 |
| EcoT14I | CCWWGG | 1 cut(s) | 100 |
| EcoT38I | GRGCYC | 1 cut(s) | 118 |
| ErhI | CCWWGG | 1 cut(s) | 100 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 120, 152, 329, 361 |
| FaqI | GGGAC | 1 cut(s) | 797 |
| FbaI | TGATCA | 3 cut(s) | 739, 748, 979 |
| FblI | GTMKAC | 1 cut(s) | 160 |
| FokI | GGATG | 2 cut(s) | 571, 1007 |
| FriOI | GRGCYC | 1 cut(s) | 118 |
| FspBI | CTAG | 1 cut(s) | 809 |
| GlaI | GCGC | 2 cut(s) | 344, 466 |
| GsaI | CCCAGC | 1 cut(s) | 135 |
| GsuI | CTGGAG | 1 cut(s) | 39 |
| HaeII | RGCGCY | 2 cut(s) | 346, 468 |
| HaeIII | GGCC | 3 cut(s) | 99, 557, 849 |
| HapII | CCGG | 5 cut(s) | 368, 487, 511, 723, 1032 |
| HgaI | GACGC | 1 cut(s) | 401 |
| HhaI | GCGC | 2 cut(s) | 345, 467 |
| Hin1I | GRCGYC | 1 cut(s) | 393 |
| Hin6I | GCGC | 2 cut(s) | 343, 465 |
| HinP1I | GCGC | 2 cut(s) | 343, 465 |
| HinfI | GANTC | 6 cut(s) | 52, 360, 500, 632, 1010, 1112 |
| HpaII | CCGG | 5 cut(s) | 368, 487, 511, 723, 1032 |
| HphI | GGTGA | 5 cut(s) | 3, 643, 749, 1019, 1099 |
| Hpy166II | GTNNAC | 3 cut(s) | 51, 161, 945 |
| Hpy188I | TCNGA | 8 cut(s) | 141, 183, 667, 753, 984, 994, 1015, 1080 |
| Hpy8I | GTNNAC | 3 cut(s) | 51, 161, 945 |
| Hpy99I | CGWCG | 3 cut(s) | 395, 416, 697 |
| HpyAV | CCTTC | 4 cut(s) | 610, 773, 860, 932 |
| HpyCH4III | ACNGT | 4 cut(s) | 15, 416, 1022, 1073 |
| HpyCH4IV | ACGT | 2 cut(s) | 786, 822 |
| HpyCH4V | TGCA | 1 cut(s) | 217 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 514, 554, 557, 560, 563, 566, 569, 572 |
| HpyF3I | CTNAG | 8 cut(s) | 164, 182, 253, 346, 440, 453, 544, 666 |
| HpySE526I | ACGT | 2 cut(s) | 786, 822 |
| Hsp92I | GRCGYC | 1 cut(s) | 393 |
| HspAI | GCGC | 2 cut(s) | 343, 465 |
| KpnI | GGTACC | 1 cut(s) | 680 |
| Ksp22I | TGATCA | 3 cut(s) | 739, 748, 979 |
| Kzo9I | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| LmnI | GCTCC | 1 cut(s) | 513 |
| Lsp1109I | GCAGC | 6 cut(s) | 538, 547, 556, 559, 560, 924 |
| MaeI | CTAG | 1 cut(s) | 809 |
| MaeII | ACGT | 2 cut(s) | 786, 822 |
| MaeIII | GTNAC | 5 cut(s) | 9, 20, 370, 862, 1037 |
| MalI | GATC | 7 cut(s) | 366, 741, 750, 900, 933, 975, 981 |
| MboI | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| MhlI | GDGCHC | 1 cut(s) | 118 |
| MlsI | TGGCCA | 1 cut(s) | 99 |
| MluCI | AATT | 7 cut(s) | 175, 206, 762, 906, 1060, 1081, 1090 |
| MluNI | TGGCCA | 1 cut(s) | 99 |
| MlyI | GAGTC | 2 cut(s) | 46, 641 |
| MmeI | TCCRAC | 3 cut(s) | 89, 662, 972 |
| MnlI | CCTC | 9 cut(s) | 128, 192, 260, 536, 553, 598, 916, 992, 1111 |
| Mox20I | TGGCCA | 1 cut(s) | 99 |
| MroXI | GAANNNNTTC | 1 cut(s) | 888 |
| MscI | TGGCCA | 1 cut(s) | 99 |
| MseI | TTAA | 3 cut(s) | 35, 765, 960 |
| MslI | CAYNNNNRTG | 2 cut(s) | 99, 858 |
| Msp20I | TGGCCA | 1 cut(s) | 99 |
| MspA1I | CMGCKG | 3 cut(s) | 538, 551, 560 |
| MspI | CCGG | 5 cut(s) | 368, 487, 511, 723, 1032 |
| MspR9I | CCNGG | 4 cut(s) | 469, 487, 681, 1033 |
| MvaI | CCWGG | 2 cut(s) | 469, 681 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 514, 554, 557, 560, 563, 566, 569, 572 |
| NciI | CCSGG | 2 cut(s) | 487, 1033 |
| NcoI | CCATGG | 1 cut(s) | 100 |
| NdeII | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| NlaIV | GGNNCC | 1 cut(s) | 678 |
| NmuCI | GTSAC | 4 cut(s) | 9, 20, 862, 1037 |
| NotI | GCGGCCGC | 1 cut(s) | 555 |
| PagI | TCATGA | 5 cut(s) | 612, 745, 853, 895, 1105 |
| PdmI | GAANNNNTTC | 1 cut(s) | 888 |
| PfeI | GAWTC | 4 cut(s) | 360, 500, 1010, 1112 |
| PflFI | GACNNNGTC | 1 cut(s) | 26 |
| PleI | GAGTC | 2 cut(s) | 46, 640 |
| PpsI | GAGTC | 2 cut(s) | 46, 640 |
| Psp6I | CCWGG | 2 cut(s) | 467, 679 |
| PspEI | GGTNACC | 2 cut(s) | 9, 370 |
| PspFI | CCCAGC | 1 cut(s) | 131 |
| PspGI | CCWGG | 2 cut(s) | 467, 679 |
| PspN4I | GGNNCC | 1 cut(s) | 678 |
| PspPI | GGNCC | 1 cut(s) | 44 |
| PstNI | CAGNNNCTG | 1 cut(s) | 551 |
| PsyI | GACNNNGTC | 1 cut(s) | 26 |
| PvuII | CAGCTG | 2 cut(s) | 538, 551 |
| RsaI | GTAC | 3 cut(s) | 678, 789, 795 |
| RsaNI | GTAC | 3 cut(s) | 677, 788, 794 |
| RseI | CAYNNNNRTG | 2 cut(s) | 99, 858 |
| SaqAI | TTAA | 3 cut(s) | 35, 765, 960 |
| Sau3AI | GATC | 7 cut(s) | 364, 739, 748, 898, 931, 973, 979 |
| Sau96I | GGNCC | 1 cut(s) | 44 |
| SchI | GAGTC | 2 cut(s) | 46, 641 |
| ScrFI | CCNGG | 4 cut(s) | 469, 487, 681, 1033 |
| SduI | GDGCHC | 1 cut(s) | 118 |
| SfcI | CTRYAG | 1 cut(s) | 157 |
| SinI | GGWCC | 1 cut(s) | 44 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 99, 858 |
| SmlI | CTYRAG | 2 cut(s) | 335, 629 |
| SmoI | CTYRAG | 2 cut(s) | 335, 629 |
| Sse9I | AATT | 7 cut(s) | 175, 206, 762, 906, 1060, 1081, 1090 |
| SsiI | CCGC | 7 cut(s) | 432, 554, 558, 563, 566, 929, 1002 |
| SspMI | CTAG | 1 cut(s) | 809 |
| StyD4I | CCNGG | 4 cut(s) | 467, 485, 679, 1031 |
| StyI | CCWWGG | 1 cut(s) | 100 |
| TaaI | ACNGT | 4 cut(s) | 15, 416, 1022, 1073 |
| TaiI | ACGT | 2 cut(s) | 789, 825 |
| TaqI | TCGA | 2 cut(s) | 87, 363 |
| TasI | AATT | 7 cut(s) | 175, 206, 762, 906, 1060, 1081, 1090 |
| TatI | WGTACW | 1 cut(s) | 793 |
| TauI | GCSGC | 5 cut(s) | 434, 557, 560, 566, 569 |
| TfiI | GAWTC | 4 cut(s) | 360, 500, 1010, 1112 |
| Tru1I | TTAA | 3 cut(s) | 35, 765, 960 |
| Tru9I | TTAA | 3 cut(s) | 35, 765, 960 |
| TscAI | CASTG | 1 cut(s) | 461 |
| TseFI | GTSAC | 4 cut(s) | 9, 20, 862, 1037 |
| TseI | GCWGC | 6 cut(s) | 548, 551, 560, 569, 572, 912 |
| Tsp45I | GTSAC | 4 cut(s) | 9, 20, 862, 1037 |
| TspDTI | ATGAA | 7 cut(s) | 573, 601, 629, 842, 881, 897, 1062 |
| TspGWI | ACGGA | 2 cut(s) | 36, 958 |
| TspRI | CASTG | 1 cut(s) | 461 |
| Tth111I | GACNNNGTC | 1 cut(s) | 26 |
| VpaK11BI | GGWCC | 1 cut(s) | 44 |
| XapI | RAATTY | 3 cut(s) | 206, 1081, 1090 |
| XmiI | GTMKAC | 1 cut(s) | 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 888 |
| XspI | CTAG | 1 cut(s) | 809 |