Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000583

Physical Location & Seq

Genomic Coordinates Forward (+)

3584456 .. 3587147

Gene Structure 2692 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1054000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1170 bp

ATGGGTCGGTCACCGTGCTGTGACAAGGTGGGTTTGAAGAAAGGACCTTGGACTCCAGAAGAAGACCAGAAGCTCTTGGCTTACATTGAAGAACACGGCCATGGCAGTTGGCGTGCACTCCCAACAAAAGCTGGTCTTCAGAGATGTGGAAAAAGCTGTAGGCTTAGATGGACTAACTATCTCAGACCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAACCATAATTCAACTCCATGCCCTATTAGGGAACAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACAGACAATGAGATAAAGAACTACTGGAATACGCATCTTAAGAAGAGGCTAGCCAAAATGGGCATCGACCCCGTCACGCACAAGCCAAAGAAGGACAACCTACTCTCTAGCGTCGACGGTCAATCCAAGAACGCCTCCAATCTCAGCCACATGGCTCAGTGGGAGAGCGCCCGGCTCGAAGCCGAGGCCCGCCTAGTCAGAGAATCAAGGCTCCGCTCCCAGAGCTCCTCATTACTCCATCAGCTCACCACCACAAACCCTAATACCTACGTTCCGGTGAATTCTTCGTCTTCGGGTTCGACATCAGCTCAGCTTCAGCTCAAGTGGCCGTCATCAAAACATTCTCATAATAGTGTTGATCTCGAGTCTCCGACATCTACGCTCACTTATAATTCCGATCAGATTAACGTTAATAATGCATCGTCCTCCGCAATGGGGGCCGCGATTATGCAGCCGGCGATGATCGAGTTTGTTGGGAGTTCAGGTTCTTCTGAGACCAAGGAAGAAGGTGGAGATAACGAACAAGATTGGAAGTCCCATTTGTCTTTTACTCCATTAGGGTTAGTTCATGATCATCATCAGAACATCTCAATGTCCATGGAAGCTGCGGGTGCATGGACTACTAATGATCATCAAGTTGGCAATGTGGCTGGTGACATGGAAGCAGCTGATCAAGAAGGGTTCACTAATCTTTTGCTTAATAACTCGGATGAGGTGCAGAGCTTGTCAGACGGGGATCGTGGCGTGGATTCTGATAACGGTGGTGGAAGCGGAAGTGGAAGGGGTAGTGACTACTACGAAGATAATAAGCATTACTGGAATAGTATTCTCAATTTGGTGAACTCTTCTCCCTCTGAATCTCCAATGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009739 GO:0009751 GO:0009753 GO:0009888 GO:0009889 GO:0009987 GO:0010026 GO:0010033 GO:0010035 GO:0010038 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0014070 GO:0016043 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0033993 GO:0035017 GO:0042221 GO:0042335 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048468 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090626 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1901957 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

390

Amino Acids

42.86

Weight (kDa)

6.24

Isoelectric Point (pI)

52.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 61	9.2e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 77	2.2e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	67 - 112	1.3e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	70 - 116	1.6e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01140 AT3G01140 AT5G15310 AT5G15310 AT5G15310 AT5G15310
fragaria_vesca	FvH4_4g31000 FvH4_5g14660 FvH4_5g14661 FvH4_6g48110
malus_domestica	MD00G1081800.v1.1 MD06G1196400.v1.1 MD06G1196500.v1.1 MD09G1054000.v1.1 MD14G1203200.v1.1 MD16G1069000.v1.1 MD17G1051700.v1.1
prunus_persica	Prupe.1G278200_v2.0.a1 Prupe.3G264500_v2.0.a1 Prupe.5G196100_v2.0.a1 Prupe.5G196100_v2.0.a1
pyrus_communis	pycom06g17330 pycom06g17350 pycom111g04520 pycom14g16820 pycom17g04890
rosa_chinensis	RchiOBHm_Chr2g0167441 RchiOBHm_Chr3g0485421 RchiOBHm_Chr4g0439371 RchiOBHm_Chr7g0181801 RchiOBHm_Chr7g0181821
rosa_laevigata	RLG00000005171 RLG00000021717 RLG00000023151
rosa_multiflora	Rmu_co8449019.1_g000001 Rmu_sc0000168.1_g000002 Rmu_sc0001120.1_g000006 Rmu_sc0001206.1_g000043 Rmu_sc0004898.1_g000006 Rmu_sc0005291.1_g000001 Rmu_sc0009036.1_g000001 Rmu_sc0010132.1_g000030 Rmu_sc0014780.1_g000004 Rmu_sc0028983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259110 Rroxscaffold_3G00271720 Rroxscaffold_5G00380300 Rroxscaffold_6G00397030
rosa_rugosa	Rorug02G0530400 Rorug03G0218000 Rorug04G0317800 Rorug06G0443600 Rorug06G0443700 Rorug06G0443900 Rorug06G0444100 Rorug06G0444300
rosa_samantha	Rh2AG597400 Rh2BG608800 Rh2CG579600 Rh2DG620000 Rh3AG267600 Rh3BG303000 Rh3DG296900 Rh3DG297800 Rh3DG298200 Rh4AG368900 Rh4BG380700 Rh4CG395200 Rh4DG375500 Rh7AG046200 Rh7AG046400 Rh7CG046500
rosa_wichuraiana	Rw2G049710 Rw3G023700 Rw3G023800 Rw3G023810 Rw3G023860 Rw3G023870 Rw4G031470 Rw7G003820 Rw7G003840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	687
AccBSI	CCGCTC	1 cut(s)	513
AccI	GTMKAC	1 cut(s)	411
AccII	CGCG	1 cut(s)	740
AciI	CCGC	6 cut(s)	487, 511, 726, 738, 905, 1068
AclI	AACGTT	1 cut(s)	705
AclWI	GGATC	1 cut(s)	1041
AcoI	YGGCCR	3 cut(s)	97, 270, 623
AcsI	RAATTY	1 cut(s)	577
AcuI	CTGAAG	2 cut(s)	122, 596
AfiI	CCNNNNNNNGG	2 cut(s)	255, 732
AflII	CTTAAG	1 cut(s)	335
AgsI	TTSAA	3 cut(s)	37, 89, 239
AloI	GAACNNNNNNTCC	2 cut(s)	766, 798
Alw21I	GWGCWC	2 cut(s)	118, 524
Alw26I	GTCTC	2 cut(s)	669, 785
Alw44I	GTGCAC	1 cut(s)	114
AlwI	GGATC	1 cut(s)	1041
Ama87I	CYCGRG	1 cut(s)	659
AoxI	GGCC	5 cut(s)	97, 270, 483, 623, 735
ApaLI	GTGCAC	1 cut(s)	114
ApeKI	GCWGC	3 cut(s)	748, 902, 962
ApoI	RAATTY	1 cut(s)	577
AspLEI	GCGC	1 cut(s)	467
AspS9I	GGNCC	3 cut(s)	44, 484, 735
AsuC2I	CCSGG	1 cut(s)	469
AsuHPI	GGTGA	5 cut(s)	3, 535, 586, 962, 1147
AsuNHI	GCTAGC	1 cut(s)	346
AvaI	CYCGRG	1 cut(s)	659
AvaII	GGWCC	1 cut(s)	44
BaeGI	GKGCMC	1 cut(s)	118
BanII	GRGCYC	1 cut(s)	524
BbsI	GAAGAC	3 cut(s)	69, 128, 579
Bbv12I	GWGCWC	2 cut(s)	118, 524
BbvI	GCAGC	3 cut(s)	760, 889, 974
BccI	CCATC	2 cut(s)	162, 543
BceAI	ACGGC	2 cut(s)	112, 610
BclI	TGATCA	3 cut(s)	868, 925, 967
BcnI	CCSGG	1 cut(s)	469
BcoDI	GTCTC	2 cut(s)	669, 785
BfaI	CTAG	3 cut(s)	347, 405, 491
BfmI	CTRYAG	1 cut(s)	157
BfoI	RGCGCY	1 cut(s)	468
BfrI	CTTAAG	1 cut(s)	335
BisI	GCNGC	4 cut(s)	738, 749, 903, 963
BlpI	GCTNAGC	1 cut(s)	606
BlsI	GCNGC	4 cut(s)	739, 750, 904, 964
Bme1390I	CCNGG	1 cut(s)	469
Bme18I	GGWCC	1 cut(s)	44
BmeT110I	CYCGRG	1 cut(s)	659
BmgT120I	GGNCC	3 cut(s)	44, 484, 735
BmiI	GGNNCC	2 cut(s)	509, 736
BmrFI	CCNGG	1 cut(s)	469
BmsI	GCATC	3 cut(s)	340, 369, 725
BmtI	GCTAGC	1 cut(s)	350
BpiI	GAAGAC	3 cut(s)	69, 128, 579
BpmI	CTGGAG	1 cut(s)	39
Bpu1102I	GCTNAGC	1 cut(s)	606
BpuEI	CTTGAG	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	469
BsaBI	GATNNNNATC	1 cut(s)	873
BsaI	GGTCTC	1 cut(s)	785
BsaJI	CCNNGG	5 cut(s)	47, 100, 480, 795, 894
BsaWI	WCCGGW	1 cut(s)	571
BsaXI	ACNNNNNCTCC	2 cut(s)	766, 796
Bsc4I	CCNNNNNNNGG	2 cut(s)	255, 732
Bse118I	RCCGGY	1 cut(s)	751
Bse1I	ACTGG	2 cut(s)	326, 1118
Bse3DI	GCAATG	2 cut(s)	735, 946
Bse8I	GATNNNNATC	1 cut(s)	873
BseDI	CCNNGG	5 cut(s)	47, 100, 480, 795, 894
BseGI	GGATG	1 cut(s)	1012
BseJI	GATNNNNATC	1 cut(s)	873
BseLI	CCNNNNNNNGG	2 cut(s)	255, 732
BseMI	GCAATG	2 cut(s)	735, 946
BseMII	CTCAG	5 cut(s)	196, 454, 467, 620, 780
BseNI	ACTGG	2 cut(s)	326, 1118
BseRI	GAGGAG	1 cut(s)	514
BseSI	GKGCMC	1 cut(s)	118
BseXI	GCAGC	3 cut(s)	760, 889, 974
BsgI	GTGCAG	1 cut(s)	1034
Bsh1236I	CGCG	1 cut(s)	740
BshFI	GGCC	5 cut(s)	99, 272, 485, 625, 737
BsiHKAI	GWGCWC	2 cut(s)	118, 524
BsiHKCI	CYCGRG	1 cut(s)	659
BsiSI	CCGG	3 cut(s)	469, 572, 752
BslFI	GGGAC	1 cut(s)	817
BslI	CCNNNNNNNGG	2 cut(s)	255, 732
BsmAI	GTCTC	2 cut(s)	669, 785
BsmFI	GGGAC	1 cut(s)	817
BsnI	GGCC	5 cut(s)	99, 272, 485, 625, 737
Bso31I	GGTCTC	1 cut(s)	785
BsoBI	CYCGRG	1 cut(s)	659
Bsp1286I	GDGCHC	2 cut(s)	118, 524
Bsp143I	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
Bsp1720I	GCTNAGC	1 cut(s)	606
Bsp19I	CCATGG	2 cut(s)	100, 894
BspACI	CCGC	6 cut(s)	487, 511, 726, 738, 905, 1068
BspANI	GGCC	5 cut(s)	99, 272, 485, 625, 737
BspCNI	CTCAG	5 cut(s)	195, 453, 466, 619, 781
BspFNI	CGCG	1 cut(s)	740
BspHI	TCATGA	1 cut(s)	865
BspLI	GGNNCC	2 cut(s)	509, 736
BspOI	GCTAGC	1 cut(s)	350
BspPI	GGATC	1 cut(s)	1041
BspTI	CTTAAG	1 cut(s)	335
BspTNI	GGTCTC	1 cut(s)	785
BsrBI	CCGCTC	1 cut(s)	513
BsrDI	GCAATG	2 cut(s)	735, 946
BsrFI	RCCGGY	1 cut(s)	751
BsrI	ACTGG	2 cut(s)	326, 1118
BssAI	RCCGGY	1 cut(s)	751
BssECI	CCNNGG	5 cut(s)	47, 100, 480, 795, 894
BssMI	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
BssT1I	CCWWGG	4 cut(s)	47, 100, 795, 894
Bst4CI	ACNGT	3 cut(s)	15, 416, 1058
Bst6I	CTCTTC	2 cut(s)	335, 1147
BstAFI	CTTAAG	1 cut(s)	335
BstC8I	GCNNGC	4 cut(s)	114, 348, 487, 753
BstDEI	CTNAG	6 cut(s)	164, 182, 440, 453, 606, 789
BstDSI	CCRYGG	2 cut(s)	100, 894
BstEII	GGTNACC	1 cut(s)	9
BstF5I	GGATG	1 cut(s)	1012
BstFNI	CGCG	1 cut(s)	740
BstH2I	RGCGCY	1 cut(s)	468
BstHHI	GCGC	1 cut(s)	467
BstKTI	GATC	7 cut(s)	658, 697, 762, 871, 928, 970, 1036
BstMAI	GTCTC	2 cut(s)	669, 785
BstMBI	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
BstMWI	GCNNNNNNNGC	4 cut(s)	519, 622, 734, 908
BstPI	GGTNACC	1 cut(s)	9
BstSCI	CCNGG	1 cut(s)	467
BstSFI	CTRYAG	1 cut(s)	157
BstSLI	GKGCMC	1 cut(s)	118
BstUI	CGCG	1 cut(s)	740
BstV1I	GCAGC	3 cut(s)	760, 889, 974
BstV2I	GAAGAC	3 cut(s)	69, 128, 579
BsuRI	GGCC	5 cut(s)	99, 272, 485, 625, 737
BtgI	CCRYGG	2 cut(s)	100, 894
BtgZI	GCGATG	1 cut(s)	770
BtsCI	GGATG	1 cut(s)	1012
BtsIMutI	CAGTG	1 cut(s)	461
Cac8I	GCNNGC	4 cut(s)	114, 348, 487, 753
CciI	TCATGA	1 cut(s)	865
CfoI	GCGC	1 cut(s)	467
Cfr10I	RCCGGY	1 cut(s)	751
Cfr13I	GGNCC	3 cut(s)	44, 484, 735
CseI	GACGC	1 cut(s)	397
CviAII	CATG	7 cut(s)	101, 245, 448, 866, 895, 912, 955
DdeI	CTNAG	6 cut(s)	164, 182, 440, 453, 606, 789
DpnI	GATC	7 cut(s)	657, 696, 761, 870, 927, 969, 1035
DpnII	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
EaeI	YGGCCR	3 cut(s)	97, 270, 623
Eam1104I	CTCTTC	2 cut(s)	335, 1147
EarI	CTCTTC	2 cut(s)	335, 1147
Ecl136II	GAGCTC	1 cut(s)	522
Eco130I	CCWWGG	4 cut(s)	47, 100, 795, 894
Eco24I	GRGCYC	1 cut(s)	524
Eco31I	GGTCTC	1 cut(s)	785
Eco47I	GGWCC	1 cut(s)	44
Eco53kI	GAGCTC	1 cut(s)	522
Eco57I	CTGAAG	2 cut(s)	122, 596
Eco88I	CYCGRG	1 cut(s)	659
Eco91I	GGTNACC	1 cut(s)	9
EcoICRI	GAGCTC	1 cut(s)	522
EcoO109I	RGGNCCY	1 cut(s)	44
EcoO65I	GGTNACC	1 cut(s)	9
EcoRI	GAATTC	1 cut(s)	577
EcoT14I	CCWWGG	4 cut(s)	47, 100, 795, 894
EcoT22I	ATGCAT	1 cut(s)	718
EcoT38I	GRGCYC	1 cut(s)	524
ErhI	CCWWGG	4 cut(s)	47, 100, 795, 894
FaeI	CATG	7 cut(s)	104, 248, 451, 869, 898, 915, 958
FalI	AAGNNNNNCTT	2 cut(s)	120, 152
FaqI	GGGAC	1 cut(s)	817
FatI	CATG	7 cut(s)	100, 244, 447, 865, 894, 911, 954
FauI	CCCGC	2 cut(s)	494, 898
FbaI	TGATCA	3 cut(s)	868, 925, 967
FblI	GTMKAC	1 cut(s)	411
Fnu4HI	GCNGC	4 cut(s)	738, 749, 903, 963
FokI	GGATG	1 cut(s)	1019
FriOI	GRGCYC	1 cut(s)	524
Fsp4HI	GCNGC	4 cut(s)	738, 749, 903, 963
FspBI	CTAG	3 cut(s)	347, 405, 491
GlaI	GCGC	1 cut(s)	466
GluI	GCNGC	4 cut(s)	738, 749, 903, 963
GsuI	CTGGAG	1 cut(s)	39
HaeII	RGCGCY	1 cut(s)	468
HaeIII	GGCC	5 cut(s)	99, 272, 485, 625, 737
HapII	CCGG	3 cut(s)	469, 572, 752
HgaI	GACGC	1 cut(s)	397
HhaI	GCGC	1 cut(s)	467
Hin1II	CATG	7 cut(s)	104, 248, 451, 869, 898, 915, 958
Hin6I	GCGC	1 cut(s)	465
HinP1I	GCGC	1 cut(s)	465
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HinfI	GANTC	5 cut(s)	52, 500, 662, 1046, 1154
HpaII	CCGG	3 cut(s)	469, 572, 752
HphI	GGTGA	5 cut(s)	3, 535, 586, 962, 1147
Hpy166II	GTNNAC	4 cut(s)	116, 412, 981, 1138
Hpy188III	TCNNGA	4 cut(s)	56, 659, 866, 971
Hpy8I	GTNNAC	4 cut(s)	116, 412, 981, 1138
Hpy99I	CGWCG	2 cut(s)	413, 416
HpyAV	CCTTC	4 cut(s)	382, 797, 968, 1071
HpyCH4III	ACNGT	3 cut(s)	15, 416, 1058
HpyCH4IV	ACGT	2 cut(s)	567, 705
HpyCH4V	TGCA	6 cut(s)	116, 217, 716, 748, 911, 1015
HpyF10VI	GCNNNNNNNGC	4 cut(s)	519, 622, 734, 908
HpyF3I	CTNAG	6 cut(s)	164, 182, 440, 453, 606, 789
HpySE526I	ACGT	2 cut(s)	567, 705
Hsp92II	CATG	7 cut(s)	104, 248, 451, 869, 898, 915, 958
HspAI	GCGC	1 cut(s)	465
KroI	GCCGGC	1 cut(s)	751
KroNI	GCCGGC	1 cut(s)	753
Ksp22I	TGATCA	3 cut(s)	868, 925, 967
Kzo9I	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
LmnI	GCTCC	3 cut(s)	513, 518, 527
Lsp1109I	GCAGC	3 cut(s)	760, 889, 974
LweI	GCATC	3 cut(s)	340, 369, 725
MaeI	CTAG	3 cut(s)	347, 405, 491
MaeII	ACGT	2 cut(s)	567, 705
MaeIII	GTNAC	5 cut(s)	9, 20, 370, 950, 1085
MalI	GATC	7 cut(s)	657, 696, 761, 870, 927, 969, 1035
MbiI	CCGCTC	1 cut(s)	513
MboI	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
MhlI	GDGCHC	2 cut(s)	118, 524
MluCI	AATT	4 cut(s)	234, 577, 688, 1129
MlyI	GAGTC	2 cut(s)	46, 671
MmeI	TCCRAC	1 cut(s)	692
MnlI	CCTC	8 cut(s)	192, 336, 442, 475, 535, 733, 1003, 1159
Mph1103I	ATGCAT	1 cut(s)	718
MroNI	GCCGGC	1 cut(s)	751
MseI	TTAA	5 cut(s)	195, 336, 702, 708, 996
MslI	CAYNNNNRTG	3 cut(s)	99, 648, 887
MspA1I	CMGCKG	1 cut(s)	965
MspCI	CTTAAG	1 cut(s)	335
MspI	CCGG	3 cut(s)	469, 572, 752
MspR9I	CCNGG	1 cut(s)	469
MvnI	CGCG	1 cut(s)	740
MwoI	GCNNNNNNNGC	4 cut(s)	519, 622, 734, 908
NaeI	GCCGGC	1 cut(s)	753
NciI	CCSGG	1 cut(s)	469
NcoI	CCATGG	2 cut(s)	100, 894
NdeII	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
NgoMIV	GCCGGC	1 cut(s)	751
NheI	GCTAGC	1 cut(s)	346
NlaIII	CATG	7 cut(s)	104, 248, 451, 869, 898, 915, 958
NlaIV	GGNNCC	2 cut(s)	509, 736
NmeAIII	GCCGAG	1 cut(s)	505
NmuCI	GTSAC	5 cut(s)	9, 20, 370, 950, 1085
NsiI	ATGCAT	1 cut(s)	718
PaeR7I	CTCGAG	1 cut(s)	659
PagI	TCATGA	1 cut(s)	865
PdiI	GCCGGC	1 cut(s)	753
PfeI	GAWTC	3 cut(s)	500, 1046, 1154
PflFI	GACNNNGTC	1 cut(s)	368
PkrI	GCNGC	4 cut(s)	739, 750, 904, 964
PleI	GAGTC	2 cut(s)	46, 670
PpsI	GAGTC	2 cut(s)	46, 670
PpuMI	RGGWCCY	1 cut(s)	44
PsiI	TTATAA	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	524
Psp1406I	AACGTT	1 cut(s)	705
Psp5II	RGGWCCY	1 cut(s)	44
PspEI	GGTNACC	1 cut(s)	9
PspN4I	GGNNCC	2 cut(s)	509, 736
PspPI	GGNCC	3 cut(s)	44, 484, 735
PspPPI	RGGWCCY	1 cut(s)	44
PsyI	GACNNNGTC	1 cut(s)	368
PvuII	CAGCTG	1 cut(s)	965
RseI	CAYNNNNRTG	3 cut(s)	99, 648, 887
SacI	GAGCTC	1 cut(s)	524
SalI	GTCGAC	1 cut(s)	410
SaqAI	TTAA	5 cut(s)	195, 336, 702, 708, 996
SatI	GCNGC	4 cut(s)	738, 749, 903, 963
Sau3AI	GATC	7 cut(s)	655, 694, 759, 868, 925, 967, 1033
Sau96I	GGNCC	3 cut(s)	44, 484, 735
SchI	GAGTC	2 cut(s)	46, 671
ScrFI	CCNGG	1 cut(s)	469
SduI	GDGCHC	2 cut(s)	118, 524
SfaNI	GCATC	3 cut(s)	340, 369, 725
SfcI	CTRYAG	1 cut(s)	157
Sfr274I	CTCGAG	1 cut(s)	659
SgrDI	CGTCGACG	1 cut(s)	410
SinI	GGWCC	1 cut(s)	44
SlaI	CTCGAG	1 cut(s)	659
SmiMI	CAYNNNNRTG	3 cut(s)	99, 648, 887
SmlI	CTYRAG	3 cut(s)	335, 617, 659
SmoI	CTYRAG	3 cut(s)	335, 617, 659
Sse9I	AATT	4 cut(s)	234, 577, 688, 1129
SsiI	CCGC	6 cut(s)	487, 511, 726, 738, 905, 1068
SspMI	CTAG	3 cut(s)	347, 405, 491
SstI	GAGCTC	1 cut(s)	524
StyD4I	CCNGG	1 cut(s)	467
StyI	CCWWGG	4 cut(s)	47, 100, 795, 894
TaaI	ACNGT	3 cut(s)	15, 416, 1058
TaiI	ACGT	2 cut(s)	570, 708
TaqI	TCGA	6 cut(s)	363, 411, 474, 596, 660, 762
TasI	AATT	4 cut(s)	234, 577, 688, 1129
TauI	GCSGC	1 cut(s)	740
TfiI	GAWTC	3 cut(s)	500, 1046, 1154
Tru1I	TTAA	5 cut(s)	195, 336, 702, 708, 996
Tru9I	TTAA	5 cut(s)	195, 336, 702, 708, 996
TscAI	CASTG	1 cut(s)	461
TseFI	GTSAC	5 cut(s)	9, 20, 370, 950, 1085
TseI	GCWGC	3 cut(s)	748, 902, 962
Tsp45I	GTSAC	5 cut(s)	9, 20, 370, 950, 1085
TspDTI	ATGAA	1 cut(s)	854
TspRI	CASTG	1 cut(s)	461
Tth111I	GACNNNGTC	1 cut(s)	368
Vha464I	CTTAAG	1 cut(s)	335
VneI	GTGCAC	1 cut(s)	114
VpaK11BI	GGWCC	1 cut(s)	44
XapI	RAATTY	1 cut(s)	577
XhoI	CTCGAG	1 cut(s)	659
XmiI	GTMKAC	1 cut(s)	411
XspI	CTAG	3 cut(s)	347, 405, 491
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.