Transcription factor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 19 - 66 | 2.1e-16 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 22 - 82 | 4.4e-12 | Myb-like DNA-binding domain |
| Myb_DNA-binding | PF00249 | 72 - 117 | 2.5e-17 | Myb-like DNA-binding domain |
| Myb_DNA-bind_6 | PF13921 | 75 - 127 | 2.9e-09 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 715 |
| AccIII | TCCGGA | 1 cut(s) | 754 |
| AciI | CCGC | 3 cut(s) | 127, 405, 612 |
| AclI | AACGTT | 1 cut(s) | 17 |
| AclWI | GGATC | 1 cut(s) | 374 |
| AcoI | YGGCCR | 1 cut(s) | 112 |
| AcsI | RAATTY | 1 cut(s) | 220 |
| AfaI | GTAC | 2 cut(s) | 699, 787 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 372 |
| AgsI | TTSAA | 6 cut(s) | 104, 488, 562, 665, 763, 934 |
| AjnI | CCWGG | 1 cut(s) | 825 |
| AleI | CACNNNNGTG | 1 cut(s) | 547 |
| Alw26I | GTCTC | 2 cut(s) | 502, 806 |
| AlwI | GGATC | 1 cut(s) | 374 |
| Ama87I | CYCGRG | 1 cut(s) | 137 |
| Aor13HI | TCCGGA | 1 cut(s) | 754 |
| AoxI | GGCC | 3 cut(s) | 59, 112, 395 |
| ApeKI | GCWGC | 3 cut(s) | 171, 293, 605 |
| ApoI | RAATTY | 1 cut(s) | 220 |
| AspS9I | GGNCC | 3 cut(s) | 59, 129, 396 |
| AsuHPI | GGTGA | 1 cut(s) | 528 |
| AvaI | CYCGRG | 1 cut(s) | 137 |
| AvaII | GGWCC | 1 cut(s) | 129 |
| BalI | TGGCCA | 1 cut(s) | 114 |
| BbsI | GAAGAC | 1 cut(s) | 243 |
| BbvCI | CCTCAGC | 1 cut(s) | 452 |
| BbvI | GCAGC | 3 cut(s) | 158, 280, 592 |
| BccI | CCATC | 3 cut(s) | 177, 254, 416 |
| BciT130I | CCWGG | 1 cut(s) | 827 |
| BclI | TGATCA | 1 cut(s) | 915 |
| BcoDI | GTCTC | 2 cut(s) | 502, 806 |
| BfaI | CTAG | 2 cut(s) | 480, 498 |
| BfmI | CTRYAG | 2 cut(s) | 172, 606 |
| BisI | GCNGC | 3 cut(s) | 172, 294, 606 |
| BlsI | GCNGC | 3 cut(s) | 173, 295, 607 |
| Bme1390I | CCNGG | 1 cut(s) | 827 |
| Bme18I | GGWCC | 1 cut(s) | 129 |
| BmeT110I | CYCGRG | 1 cut(s) | 137 |
| BmgT120I | GGNCC | 3 cut(s) | 59, 129, 396 |
| BmiI | GGNNCC | 1 cut(s) | 729 |
| BmrFI | CCNGG | 1 cut(s) | 827 |
| BmrI | ACTGGG | 1 cut(s) | 855 |
| BmsI | GCATC | 2 cut(s) | 542, 853 |
| BmuI | ACTGGG | 1 cut(s) | 855 |
| BpiI | GAAGAC | 1 cut(s) | 243 |
| Bpu10I | CCTNAGC | 1 cut(s) | 452 |
| BpuEI | CTTGAG | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 4 cut(s) | 62, 115, 305, 825 |
| BsaWI | WCCGGW | 1 cut(s) | 754 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 372 |
| Bse118I | RCCGGY | 1 cut(s) | 632 |
| Bse1I | ACTGG | 2 cut(s) | 341, 850 |
| BseAI | TCCGGA | 1 cut(s) | 754 |
| BseBI | CCWGG | 1 cut(s) | 827 |
| BseDI | CCNNGG | 4 cut(s) | 62, 115, 305, 825 |
| BseGI | GGATG | 2 cut(s) | 408, 868 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 372 |
| BseMII | CTCAG | 2 cut(s) | 466, 479 |
| BseNI | ACTGG | 2 cut(s) | 341, 850 |
| BseXI | GCAGC | 3 cut(s) | 158, 280, 592 |
| BsgI | GTGCAG | 1 cut(s) | 918 |
| BshFI | GGCC | 3 cut(s) | 61, 114, 397 |
| BsiHKCI | CYCGRG | 1 cut(s) | 137 |
| BsiSI | CCGG | 2 cut(s) | 633, 755 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 372 |
| BsmAI | GTCTC | 2 cut(s) | 502, 806 |
| BsnI | GGCC | 3 cut(s) | 61, 114, 397 |
| BsoBI | CYCGRG | 1 cut(s) | 137 |
| Bsp13I | TCCGGA | 1 cut(s) | 754 |
| Bsp143I | GATC | 2 cut(s) | 379, 915 |
| Bsp19I | CCATGG | 2 cut(s) | 62, 115 |
| BspACI | CCGC | 3 cut(s) | 127, 405, 612 |
| BspANI | GGCC | 3 cut(s) | 61, 114, 397 |
| BspCNI | CTCAG | 2 cut(s) | 465, 478 |
| BspEI | TCCGGA | 1 cut(s) | 754 |
| BspHI | TCATGA | 1 cut(s) | 918 |
| BspLI | GGNNCC | 1 cut(s) | 729 |
| BspMAI | CTGCAG | 2 cut(s) | 176, 610 |
| BspPI | GGATC | 1 cut(s) | 374 |
| BspQI | GCTCTTC | 1 cut(s) | 161 |
| BsrFI | RCCGGY | 1 cut(s) | 632 |
| BsrI | ACTGG | 2 cut(s) | 341, 850 |
| BssAI | RCCGGY | 1 cut(s) | 632 |
| BssECI | CCNNGG | 4 cut(s) | 62, 115, 305, 825 |
| BssMI | GATC | 2 cut(s) | 379, 915 |
| BssT1I | CCWWGG | 3 cut(s) | 62, 115, 305 |
| Bst2UI | CCWGG | 1 cut(s) | 827 |
| Bst4CI | ACNGT | 5 cut(s) | 513, 549, 720, 782, 800 |
| Bst6I | CTCTTC | 2 cut(s) | 161, 350 |
| BstC8I | GCNNGC | 3 cut(s) | 125, 176, 610 |
| BstDEI | CTNAG | 3 cut(s) | 179, 452, 465 |
| BstDSI | CCRYGG | 2 cut(s) | 62, 115 |
| BstEII | GGTNACC | 1 cut(s) | 800 |
| BstF5I | GGATG | 2 cut(s) | 408, 868 |
| BstKTI | GATC | 2 cut(s) | 382, 918 |
| BstMAI | GTCTC | 2 cut(s) | 502, 806 |
| BstMBI | GATC | 2 cut(s) | 379, 915 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 120, 133, 293, 413, 539 |
| BstNI | CCWGG | 1 cut(s) | 827 |
| BstPI | GGTNACC | 1 cut(s) | 800 |
| BstSCI | CCNGG | 1 cut(s) | 825 |
| BstSFI | CTRYAG | 2 cut(s) | 172, 606 |
| BstV1I | GCAGC | 3 cut(s) | 158, 280, 592 |
| BstV2I | GAAGAC | 1 cut(s) | 243 |
| BsuRI | GGCC | 3 cut(s) | 61, 114, 397 |
| BtgI | CCRYGG | 2 cut(s) | 62, 115 |
| BtsCI | GGATG | 2 cut(s) | 408, 868 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 5 cut(s) | 30, 473, 554, 787, 901 |
| Cac8I | GCNNGC | 3 cut(s) | 125, 176, 610 |
| CciI | TCATGA | 1 cut(s) | 918 |
| Cfr10I | RCCGGY | 1 cut(s) | 632 |
| Cfr13I | GGNCC | 3 cut(s) | 59, 129, 396 |
| Csp6I | GTAC | 2 cut(s) | 698, 786 |
| CviAII | CATG | 7 cut(s) | 63, 110, 116, 260, 573, 647, 919 |
| CviQI | GTAC | 2 cut(s) | 698, 786 |
| DdeI | CTNAG | 3 cut(s) | 179, 452, 465 |
| DpnI | GATC | 2 cut(s) | 381, 917 |
| DpnII | GATC | 2 cut(s) | 379, 915 |
| EaeI | YGGCCR | 1 cut(s) | 112 |
| Eam1104I | CTCTTC | 2 cut(s) | 161, 350 |
| EarI | CTCTTC | 2 cut(s) | 161, 350 |
| Eco130I | CCWWGG | 3 cut(s) | 62, 115, 305 |
| Eco32I | GATATC | 1 cut(s) | 892 |
| Eco47I | GGWCC | 1 cut(s) | 129 |
| Eco88I | CYCGRG | 1 cut(s) | 137 |
| Eco91I | GGTNACC | 1 cut(s) | 800 |
| EcoO65I | GGTNACC | 1 cut(s) | 800 |
| EcoRII | CCWGG | 1 cut(s) | 825 |
| EcoRV | GATATC | 1 cut(s) | 892 |
| EcoT14I | CCWWGG | 3 cut(s) | 62, 115, 305 |
| ErhI | CCWWGG | 3 cut(s) | 62, 115, 305 |
| FaeI | CATG | 7 cut(s) | 66, 113, 119, 263, 576, 650, 922 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 74, 106 |
| FatI | CATG | 7 cut(s) | 62, 109, 115, 259, 572, 646, 918 |
| FbaI | TGATCA | 1 cut(s) | 915 |
| FblI | GTMKAC | 1 cut(s) | 715 |
| Fnu4HI | GCNGC | 3 cut(s) | 172, 294, 606 |
| FokI | GGATG | 2 cut(s) | 395, 875 |
| Fsp4HI | GCNGC | 3 cut(s) | 172, 294, 606 |
| FspBI | CTAG | 2 cut(s) | 480, 498 |
| GluI | GCNGC | 3 cut(s) | 172, 294, 606 |
| HaeIII | GGCC | 3 cut(s) | 61, 114, 397 |
| HapII | CCGG | 2 cut(s) | 633, 755 |
| Hin1II | CATG | 7 cut(s) | 66, 113, 119, 263, 576, 650, 922 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 67 |
| HpaI | GTTAAC | 1 cut(s) | 21 |
| HpaII | CCGG | 2 cut(s) | 633, 755 |
| HphI | GGTGA | 1 cut(s) | 528 |
| Hpy166II | GTNNAC | 4 cut(s) | 21, 152, 698, 716 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 775 |
| Hpy188III | TCNNGA | 6 cut(s) | 12, 74, 211, 665, 755, 919 |
| Hpy8I | GTNNAC | 4 cut(s) | 21, 152, 698, 716 |
| Hpy99I | CGWCG | 1 cut(s) | 629 |
| HpyCH4III | ACNGT | 5 cut(s) | 513, 549, 720, 782, 800 |
| HpyCH4IV | ACGT | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 6 cut(s) | 174, 232, 263, 608, 650, 899 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 120, 133, 293, 413, 539 |
| HpyF3I | CTNAG | 3 cut(s) | 179, 452, 465 |
| HpySE526I | ACGT | 1 cut(s) | 17 |
| Hsp92II | CATG | 7 cut(s) | 66, 113, 119, 263, 576, 650, 922 |
| Kpn2I | TCCGGA | 1 cut(s) | 754 |
| Ksp22I | TGATCA | 1 cut(s) | 915 |
| KspAI | GTTAAC | 1 cut(s) | 21 |
| Kzo9I | GATC | 2 cut(s) | 379, 915 |
| LguI | GCTCTTC | 1 cut(s) | 161 |
| LmnI | GCTCC | 1 cut(s) | 733 |
| Lsp1109I | GCAGC | 3 cut(s) | 158, 280, 592 |
| LweI | GCATC | 2 cut(s) | 542, 853 |
| MaeI | CTAG | 2 cut(s) | 480, 498 |
| MaeII | ACGT | 1 cut(s) | 17 |
| MaeIII | GTNAC | 2 cut(s) | 385, 800 |
| MalI | GATC | 2 cut(s) | 381, 917 |
| MboI | GATC | 2 cut(s) | 379, 915 |
| MboII | GAAGA | 4 cut(s) | 178, 248, 367, 448 |
| MlsI | TGGCCA | 1 cut(s) | 114 |
| MluCI | AATT | 4 cut(s) | 220, 562, 685, 734 |
| MluNI | TGGCCA | 1 cut(s) | 114 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| Mox20I | TGGCCA | 1 cut(s) | 114 |
| MroI | TCCGGA | 1 cut(s) | 754 |
| MscI | TGGCCA | 1 cut(s) | 114 |
| MseI | TTAA | 3 cut(s) | 20, 566, 737 |
| MslI | CAYNNNNRTG | 2 cut(s) | 114, 547 |
| Msp20I | TGGCCA | 1 cut(s) | 114 |
| MspI | CCGG | 2 cut(s) | 633, 755 |
| MspR9I | CCNGG | 1 cut(s) | 827 |
| MvaI | CCWGG | 1 cut(s) | 827 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 120, 133, 293, 413, 539 |
| NcoI | CCATGG | 2 cut(s) | 62, 115 |
| NdeII | GATC | 2 cut(s) | 379, 915 |
| NlaIII | CATG | 7 cut(s) | 66, 113, 119, 263, 576, 650, 922 |
| NlaIV | GGNNCC | 1 cut(s) | 729 |
| NmeAIII | GCCGAG | 1 cut(s) | 249 |
| OliI | CACNNNNGTG | 1 cut(s) | 547 |
| PagI | TCATGA | 1 cut(s) | 918 |
| PciSI | GCTCTTC | 1 cut(s) | 161 |
| PkrI | GCNGC | 3 cut(s) | 173, 295, 607 |
| PleI | GAGTC | 1 cut(s) | 75 |
| PpsI | GAGTC | 1 cut(s) | 75 |
| Psp1406I | AACGTT | 1 cut(s) | 17 |
| Psp6I | CCWGG | 1 cut(s) | 825 |
| PspEI | GGTNACC | 1 cut(s) | 800 |
| PspGI | CCWGG | 1 cut(s) | 825 |
| PspN4I | GGNNCC | 1 cut(s) | 729 |
| PspPI | GGNCC | 3 cut(s) | 59, 129, 396 |
| PstI | CTGCAG | 2 cut(s) | 176, 610 |
| RsaI | GTAC | 2 cut(s) | 699, 787 |
| RsaNI | GTAC | 2 cut(s) | 698, 786 |
| RseI | CAYNNNNRTG | 2 cut(s) | 114, 547 |
| SapI | GCTCTTC | 1 cut(s) | 161 |
| SaqAI | TTAA | 3 cut(s) | 20, 566, 737 |
| SatI | GCNGC | 3 cut(s) | 172, 294, 606 |
| Sau3AI | GATC | 2 cut(s) | 379, 915 |
| Sau96I | GGNCC | 3 cut(s) | 59, 129, 396 |
| SchI | GAGTC | 1 cut(s) | 76 |
| ScrFI | CCNGG | 1 cut(s) | 827 |
| SfaNI | GCATC | 2 cut(s) | 542, 853 |
| SfcI | CTRYAG | 2 cut(s) | 172, 606 |
| SinI | GGWCC | 1 cut(s) | 129 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 114, 547 |
| SmlI | CTYRAG | 1 cut(s) | 72 |
| SmoI | CTYRAG | 1 cut(s) | 72 |
| Sse9I | AATT | 4 cut(s) | 220, 562, 685, 734 |
| SsiI | CCGC | 3 cut(s) | 127, 405, 612 |
| SspMI | CTAG | 2 cut(s) | 480, 498 |
| StyD4I | CCNGG | 1 cut(s) | 825 |
| StyI | CCWWGG | 3 cut(s) | 62, 115, 305 |
| TaaI | ACNGT | 5 cut(s) | 513, 549, 720, 782, 800 |
| TaiI | ACGT | 1 cut(s) | 20 |
| TasI | AATT | 4 cut(s) | 220, 562, 685, 734 |
| TatI | WGTACW | 1 cut(s) | 697 |
| Tru1I | TTAA | 3 cut(s) | 20, 566, 737 |
| Tru9I | TTAA | 3 cut(s) | 20, 566, 737 |
| TscAI | CASTG | 5 cut(s) | 37, 473, 554, 787, 901 |
| TseI | GCWGC | 3 cut(s) | 171, 293, 605 |
| TspDTI | ATGAA | 5 cut(s) | 88, 248, 666, 780, 807 |
| TspRI | CASTG | 5 cut(s) | 37, 473, 554, 787, 901 |
| VpaK11BI | GGWCC | 1 cut(s) | 129 |
| XapI | RAATTY | 1 cut(s) | 220 |
| XmiI | GTMKAC | 1 cut(s) | 715 |
| XspI | CTAG | 2 cut(s) | 480, 498 |