FvH4_6g22260

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
15898209 .. 15901900
3692 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g22260.t3

Sequence Viewer

Length: 1227 bp
ATGGCGAAGCGGTACCGGAGCCTGTACTTCATAGCGATTCTCGTCGCCGTGTTCGTGTCGGCACCGCCGGCCGTAGCTTTTACTGATCTGCTTGACGTCGTGGCTCTTCGAGATCTTTACAAGACCCTCAACCAACCGCCACAGCTAAAGGGTTGGAGCCTGGATAGTGGAGACGATCCATGCGAGTTGTGGTATAGGGTCAGCTGTTTAAACTACTCGGTAGTGGAACTTGATCTCAATGGACTAAACCTCTCCGGGTATATTACTCCCGAGATGTATAATCTCTATAATTTGAAGCACCTGGATATTAGTTCCAATAGCATTGGTGGTGAAATTCCGTATGTCTTACCGCCGAGATTAATTCATGTAAATATGGCATACAACCATTTAATCCAGAATATTCCCCCATCCTTACCTGGCATGAAAAGTCTTCGTTATTTGAATCTAAGCCACAATTTGTTGTCTGGACCCATTGGCAATGTTTTTACTGGCTTACAGAATTTAAGAGAAATGGACTTGTCATATAATAACTTTACTGGAGATCTGCCAAGTTCATTTGGATCCCTCACAAATCTCACTGGACTGTACTTACAGAATAACAAATTCACTGGATCAGTTGCTTACCTAGCTGAACTTCCACTAATTGATCTGAATATCAAAGATAACTCATTCAGTGGTATCATCCCCAGTCATTTTCAGTCCATACCAAATTTATGGATTGGGGGGAACAGTTTTCGTCTGCCAGGGGACAACTATCCACCCTGGGATTTCCCTCTAGAAACGCAAGGAGGTGTCATTGAACAGGACATCCACCCTCCGTCAGCAACTCAGTCAAGTGCCATGGAGAAGAGCAACCCCTCTACCAAAGTAGGCGGACACAGGAAATGGGGGTTTGGCCCTAAAGGAATTGCTTTGGTGATTGGTGGGGGAACAGTGGTTGTGTCATGTGTGATAGTTTACATTCTTGTACGTTATAGTGCGTATCGCTTCAATAAATTACGAGCACAGAGGTTGGGGGCAAGTAGTTCAAGCCGCTCTTTCACAGTCATTTCTACTTCTAAAGTCTTAACCACAGATACTGAACCATATGGCAATGGGTCCATGTTGACTGAAGAAACCGAGAGCTCGGAAGAGGAGCTTCTTCCCCCTCATAACAACTTAAGGCTGATGTGTCCAAGGCCTCAGGTGATGTCTCGTCCTACATCACCTACATCACTAAGTGTGTGA

Protein Analysis

409

Amino Acids

44.98

Weight (kDa)

6.45

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 70 - 111 5.3e-08 Leucine rich repeat
LRR_4 PF12799 75 - 111 2.3e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 99
Acc65I GGTACC 1 cut(s) 12
AccB1I GGYRCC 2 cut(s) 12, 61
AccBSI CCGCTC 1 cut(s) 1035
AciI CCGC 6 cut(s) 10, 65, 137, 350, 873, 1033
AclWI GGATC 4 cut(s) 170, 555, 568, 619
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 4 cut(s) 333, 499, 602, 709
AcuI CTGAAG 1 cut(s) 1131
AcyI GRCGYC 1 cut(s) 96
AdeI CACNNNGTG 1 cut(s) 1220
AfaI GTAC 4 cut(s) 14, 26, 587, 969
AflII CTTAAG 1 cut(s) 1159
AgsI TTSAA 5 cut(s) 295, 442, 800, 991, 1029
AjnI CCWGG 5 cut(s) 159, 300, 415, 742, 761
AloI GAACNNNNNNTCC 2 cut(s) 792, 824
AluBI AGCT 6 cut(s) 77, 145, 204, 629, 1125, 1138
AluI AGCT 6 cut(s) 77, 145, 204, 629, 1125, 1138
Alw21I GWGCWC 2 cut(s) 1006, 1127
Alw26I GTCTC 2 cut(s) 165, 1197
AlwI GGATC 4 cut(s) 170, 555, 568, 619
AlwNI CAGNNNCTG 1 cut(s) 1079
Ama87I CYCGRG 1 cut(s) 269
AoxI GGCC 3 cut(s) 69, 895, 1178
ApoI RAATTY 4 cut(s) 333, 499, 602, 709
AseI ATTAAT 1 cut(s) 359
Asp718I GGTACC 1 cut(s) 12
AspS9I GGNCC 3 cut(s) 467, 896, 1098
AsuC2I CCSGG 1 cut(s) 256
AsuHPI GGTGA 4 cut(s) 341, 928, 1197, 1198
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 2 cut(s) 467, 1098
AxyI CCTNAGG 1 cut(s) 1182
BamHI GGATCC 1 cut(s) 560
BanI GGYRCC 2 cut(s) 12, 61
BanII GRGCYC 1 cut(s) 1127
BbsI GAAGAC 1 cut(s) 422
Bbv12I GWGCWC 2 cut(s) 1006, 1127
BccI CCATC 1 cut(s) 415
BceAI ACGGC 2 cut(s) 32, 56
BciT130I CCWGG 5 cut(s) 161, 302, 417, 744, 763
BcnI CCSGG 1 cut(s) 256
BcoDI GTCTC 2 cut(s) 165, 1197
BfaI CTAG 2 cut(s) 626, 776
BfrI CTTAAG 1 cut(s) 1159
BglII AGATCT 2 cut(s) 112, 541
BisI GCNGC 1 cut(s) 1033
BlsI GCNGC 1 cut(s) 1034
Bme1390I CCNGG 6 cut(s) 161, 256, 302, 417, 744, 763
Bme18I GGWCC 2 cut(s) 467, 1098
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 3 cut(s) 467, 896, 1098
BmiI GGNNCC 7 cut(s) 14, 20, 63, 158, 469, 562, 1099
BmrFI CCNGG 6 cut(s) 161, 256, 302, 417, 744, 763
BmrI ACTGGG 1 cut(s) 681
BmuI ACTGGG 1 cut(s) 681
BpiI GAAGAC 1 cut(s) 422
BpmI CTGGAG 1 cut(s) 558
BpuMI CCSGG 1 cut(s) 256
BsaHI GRCGYC 1 cut(s) 96
BsaJI CCNNGG 5 cut(s) 743, 761, 762, 840, 1175
BsaWI WCCGGW 1 cut(s) 15
Bse118I RCCGGY 1 cut(s) 67
Bse1I ACTGG 5 cut(s) 493, 541, 583, 613, 687
Bse21I CCTNAGG 1 cut(s) 1182
Bse3DI GCAATG 2 cut(s) 484, 1099
BseBI CCWGG 5 cut(s) 161, 302, 417, 744, 763
BseDI CCNNGG 5 cut(s) 743, 761, 762, 840, 1175
BseGI GGATG 3 cut(s) 407, 681, 807
BseMI GCAATG 2 cut(s) 484, 1099
BseMII CTCAG 2 cut(s) 842, 1196
BseNI ACTGG 5 cut(s) 493, 541, 583, 613, 687
BseRI GAGGAG 1 cut(s) 1148
BseX3I CGGCCG 1 cut(s) 69
Bsh1285I CGRYCG 1 cut(s) 72
BshFI GGCC 3 cut(s) 71, 897, 1180
BshNI GGYRCC 2 cut(s) 12, 61
BsiEI CGRYCG 1 cut(s) 72
BsiHKAI GWGCWC 2 cut(s) 1006, 1127
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 3 cut(s) 16, 68, 255
BslFI GGGAC 1 cut(s) 761
BsmAI GTCTC 2 cut(s) 165, 1197
BsmBI CGTCTC 1 cut(s) 165
BsmFI GGGAC 1 cut(s) 761
BsnI GGCC 3 cut(s) 71, 897, 1180
BsoBI CYCGRG 1 cut(s) 269
Bsp1286I GDGCHC 2 cut(s) 1006, 1127
Bsp143I GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
Bsp19I CCATGG 1 cut(s) 840
BspACI CCGC 6 cut(s) 10, 65, 137, 350, 873, 1033
BspANI GGCC 3 cut(s) 71, 897, 1180
BspCNI CTCAG 2 cut(s) 841, 1195
BspLI GGNNCC 7 cut(s) 14, 20, 63, 158, 469, 562, 1099
BspPI GGATC 4 cut(s) 170, 555, 568, 619
BspQI GCTCTTC 2 cut(s) 111, 842
BspT107I GGYRCC 2 cut(s) 12, 61
BspTI CTTAAG 1 cut(s) 1159
BsrBI CCGCTC 1 cut(s) 1035
BsrDI GCAATG 2 cut(s) 484, 1099
BsrFI RCCGGY 1 cut(s) 67
BsrI ACTGG 5 cut(s) 493, 541, 583, 613, 687
BssAI RCCGGY 1 cut(s) 67
BssECI CCNNGG 5 cut(s) 743, 761, 762, 840, 1175
BssMI GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
BssNI GRCGYC 1 cut(s) 96
BssT1I CCWWGG 2 cut(s) 840, 1175
Bst2UI CCWGG 5 cut(s) 161, 302, 417, 744, 763
Bst4CI ACNGT 4 cut(s) 585, 731, 934, 1045
Bst6I CTCTTC 3 cut(s) 111, 842, 1125
BstACI GRCGYC 1 cut(s) 96
BstAFI CTTAAG 1 cut(s) 1159
BstC8I GCNNGC 1 cut(s) 69
BstDEI CTNAG 4 cut(s) 446, 828, 1182, 1217
BstDSI CCRYGG 1 cut(s) 840
BstF5I GGATG 3 cut(s) 407, 681, 807
BstKTI GATC 8 cut(s) 88, 115, 178, 235, 544, 563, 614, 649
BstMAI GTCTC 2 cut(s) 165, 1197
BstMBI GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
BstMCI CGRYCG 1 cut(s) 72
BstMWI GCNNNNNNNGC 2 cut(s) 68, 626
BstNI CCWGG 5 cut(s) 161, 302, 417, 744, 763
BstSCI CCNGG 6 cut(s) 159, 254, 300, 415, 742, 761
BstV2I GAAGAC 1 cut(s) 422
BstX2I RGATCY 3 cut(s) 112, 541, 560
BstXI CCANNNNNNTGG 1 cut(s) 714
BstYI RGATCY 3 cut(s) 112, 541, 560
BstZI CGGCCG 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 1182
BsuRI GGCC 3 cut(s) 71, 897, 1180
BtgI CCRYGG 1 cut(s) 840
BtsCI GGATG 3 cut(s) 407, 681, 807
BtsIMutI CAGTG 4 cut(s) 576, 606, 679, 939
Cac8I GCNNGC 1 cut(s) 69
CaiI CAGNNNCTG 1 cut(s) 1079
Cfr10I RCCGGY 1 cut(s) 67
Cfr13I GGNCC 3 cut(s) 467, 896, 1098
Csp6I GTAC 4 cut(s) 13, 25, 586, 968
CviAII CATG 6 cut(s) 180, 365, 421, 841, 945, 1102
CviQI GTAC 4 cut(s) 13, 25, 586, 968
DdeI CTNAG 4 cut(s) 446, 828, 1182, 1217
DpnI GATC 8 cut(s) 87, 114, 177, 234, 543, 562, 613, 648
DpnII GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
DraI TTTAAA 1 cut(s) 210
DraIII CACNNNGTG 1 cut(s) 1220
EaeI YGGCCR 1 cut(s) 69
EagI CGGCCG 1 cut(s) 69
Eam1104I CTCTTC 3 cut(s) 111, 842, 1125
EarI CTCTTC 3 cut(s) 111, 842, 1125
EciI GGCGGA 1 cut(s) 888
Ecl136II GAGCTC 1 cut(s) 1125
EclXI CGGCCG 1 cut(s) 69
Eco130I CCWWGG 2 cut(s) 840, 1175
Eco147I AGGCCT 1 cut(s) 1180
Eco24I GRGCYC 1 cut(s) 1127
Eco47I GGWCC 2 cut(s) 467, 1098
Eco52I CGGCCG 1 cut(s) 69
Eco53kI GAGCTC 1 cut(s) 1125
Eco57I CTGAAG 1 cut(s) 1131
Eco81I CCTNAGG 1 cut(s) 1182
Eco88I CYCGRG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 1125
EcoRII CCWGG 5 cut(s) 159, 300, 415, 742, 761
EcoT14I CCWWGG 2 cut(s) 840, 1175
EcoT38I GRGCYC 1 cut(s) 1127
ErhI CCWWGG 2 cut(s) 840, 1175
Esp3I CGTCTC 1 cut(s) 165
FaeI CATG 6 cut(s) 183, 368, 424, 844, 948, 1105
FalI AAGNNNNNCTT 4 cut(s) 1021, 1053, 1122, 1154
FaqI GGGAC 1 cut(s) 761
FatI CATG 6 cut(s) 179, 364, 420, 840, 944, 1101
FauNDI CATATG 1 cut(s) 1087
Fnu4HI GCNGC 1 cut(s) 1033
FokI GGATG 3 cut(s) 394, 668, 794
FriOI GRGCYC 1 cut(s) 1127
Fsp4HI GCNGC 1 cut(s) 1033
FspBI CTAG 2 cut(s) 626, 776
GluI GCNGC 1 cut(s) 1033
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 3 cut(s) 71, 897, 1180
HapII CCGG 3 cut(s) 16, 68, 255
Hin1I GRCGYC 1 cut(s) 96
Hin1II CATG 6 cut(s) 183, 368, 424, 844, 948, 1105
HincII GTYRAC 1 cut(s) 1107
HindII GTYRAC 1 cut(s) 1107
HinfI GANTC 2 cut(s) 37, 442
HpaII CCGG 3 cut(s) 16, 68, 255
HphI GGTGA 4 cut(s) 341, 928, 1197, 1198
Hpy166II GTNNAC 2 cut(s) 958, 1107
Hpy188I TCNGA 2 cut(s) 651, 1129
Hpy188III TCNNGA 5 cut(s) 110, 269, 394, 465, 776
Hpy8I GTNNAC 2 cut(s) 958, 1107
Hpy99I CGWCG 2 cut(s) 47, 101
HpyCH4III ACNGT 4 cut(s) 585, 731, 934, 1045
HpyCH4IV ACGT 2 cut(s) 96, 970
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 626
HpyF3I CTNAG 4 cut(s) 446, 828, 1182, 1217
HpySE526I ACGT 2 cut(s) 96, 970
Hsp92I GRCGYC 1 cut(s) 96
Hsp92II CATG 6 cut(s) 183, 368, 424, 844, 948, 1105
KpnI GGTACC 1 cut(s) 16
KroI GCCGGC 1 cut(s) 67
KroNI GCCGGC 1 cut(s) 69
Kzo9I GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
LguI GCTCTTC 2 cut(s) 111, 842
LmnI GCTCC 3 cut(s) 18, 156, 1135
MaeI CTAG 2 cut(s) 626, 776
MaeII ACGT 2 cut(s) 96, 970
MalI GATC 8 cut(s) 87, 114, 177, 234, 543, 562, 613, 648
MbiI CCGCTC 1 cut(s) 1035
MboI GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
MboII GAAGA 6 cut(s) 98, 422, 859, 1124, 1133, 1142
MflI RGATCY 3 cut(s) 112, 541, 560
MhlI GDGCHC 2 cut(s) 1006, 1127
MmeI TCCRAC 1 cut(s) 134
MroNI GCCGGC 1 cut(s) 67
MseI TTAA 6 cut(s) 209, 359, 389, 503, 1067, 1160
MspA1I CMGCKG 1 cut(s) 204
MspCI CTTAAG 1 cut(s) 1159
MspI CCGG 3 cut(s) 16, 68, 255
MspR9I CCNGG 6 cut(s) 161, 256, 302, 417, 744, 763
MssI GTTTAAAC 1 cut(s) 210
MvaI CCWGG 5 cut(s) 161, 302, 417, 744, 763
MwoI GCNNNNNNNGC 2 cut(s) 68, 626
NaeI GCCGGC 1 cut(s) 69
NciI CCSGG 1 cut(s) 256
NcoI CCATGG 1 cut(s) 840
NdeI CATATG 1 cut(s) 1087
NdeII GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
NgoMIV GCCGGC 1 cut(s) 67
NlaIII CATG 6 cut(s) 183, 368, 424, 844, 948, 1105
NlaIV GGNNCC 7 cut(s) 14, 20, 63, 158, 469, 562, 1099
NmeAIII GCCGAG 1 cut(s) 378
PasI CCCWGGG 1 cut(s) 762
PceI AGGCCT 1 cut(s) 1180
PciSI GCTCTTC 2 cut(s) 111, 842
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 180
PdiI GCCGGC 1 cut(s) 69
PfeI GAWTC 2 cut(s) 37, 442
PkrI GCNGC 1 cut(s) 1034
PmeI GTTTAAAC 1 cut(s) 210
PshBI ATTAAT 1 cut(s) 359
Psp124BI GAGCTC 1 cut(s) 1127
Psp6I CCWGG 5 cut(s) 159, 300, 415, 742, 761
PspGI CCWGG 5 cut(s) 159, 300, 415, 742, 761
PspN4I GGNNCC 7 cut(s) 14, 20, 63, 158, 469, 562, 1099
PspPI GGNCC 3 cut(s) 467, 896, 1098
PstNI CAGNNNCTG 1 cut(s) 1079
PsuI RGATCY 3 cut(s) 112, 541, 560
PvuII CAGCTG 1 cut(s) 204
RsaI GTAC 4 cut(s) 14, 26, 587, 969
RsaNI GTAC 4 cut(s) 13, 25, 586, 968
SacI GAGCTC 1 cut(s) 1127
SapI GCTCTTC 2 cut(s) 111, 842
SaqAI TTAA 6 cut(s) 209, 359, 389, 503, 1067, 1160
SatI GCNGC 1 cut(s) 1033
Sau3AI GATC 8 cut(s) 85, 112, 175, 232, 541, 560, 611, 646
Sau96I GGNCC 3 cut(s) 467, 896, 1098
ScrFI CCNGG 6 cut(s) 161, 256, 302, 417, 744, 763
SduI GDGCHC 2 cut(s) 1006, 1127
SinI GGWCC 2 cut(s) 467, 1098
SmlI CTYRAG 1 cut(s) 1159
SmoI CTYRAG 1 cut(s) 1159
SseBI AGGCCT 1 cut(s) 1180
SsiI CCGC 6 cut(s) 10, 65, 137, 350, 873, 1033
SspI AATATT 1 cut(s) 400
SspMI CTAG 2 cut(s) 626, 776
SstI GAGCTC 1 cut(s) 1127
StuI AGGCCT 1 cut(s) 1180
StyD4I CCNGG 6 cut(s) 159, 254, 300, 415, 742, 761
StyI CCWWGG 2 cut(s) 840, 1175
TaaI ACNGT 4 cut(s) 585, 731, 934, 1045
TaiI ACGT 2 cut(s) 99, 973
TaqI TCGA 1 cut(s) 109
TatI WGTACW 2 cut(s) 24, 585
TauI GCSGC 1 cut(s) 1035
TfiI GAWTC 2 cut(s) 37, 442
Tru1I TTAA 6 cut(s) 209, 359, 389, 503, 1067, 1160
Tru9I TTAA 6 cut(s) 209, 359, 389, 503, 1067, 1160
TscAI CASTG 4 cut(s) 583, 613, 679, 939
TspDTI ATGAA 4 cut(s) 19, 353, 437, 543
TspGWI ACGGA 2 cut(s) 327, 807
TspRI CASTG 4 cut(s) 583, 613, 679, 939
Vha464I CTTAAG 1 cut(s) 1159
VpaK11BI GGWCC 2 cut(s) 467, 1098
VspI ATTAAT 1 cut(s) 359
XapI RAATTY 4 cut(s) 333, 499, 602, 709
XbaI TCTAGA 1 cut(s) 775
XcmI CCANNNNNNNNNTGG 1 cut(s) 186
XspI CTAG 2 cut(s) 626, 776
ZraI GACGTC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.