Rmu_sc0008085.1_g000009

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008085.1
Physical Location & Seq
Forward (+)
20298 .. 21246
949 bp
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UTR
Exon/CDS
Intron
Rmu_sc0008085.1_g000009.1.cds

Sequence Viewer

Length: 609 bp
atgtctggactctccttccataaagaagaacaattcctggatgtcgtttggactgtttcgcgtttgaagcacccaaacattgtaccacttgttggctattgtgcggagcatggacaacatcttcttgtgtatgattatgtcagaaatttatcggttgatgaggcacttcacagtgatgcacacaagcctctaccctggggcctccatctccaaattgttcttgttgctcatggcaacttgaagagtgacaatatcttacttgatgaaaattttgctcctcgtatttgtgactgcgggcttgctattttgagttcaagaccaagggaagagcaatcactagtgaaatgggcttcattgcggcttcatgactatgaaagtctggatgagatgattgattcaggcaatgaaaagacatgttcctcgaaggctctctcaaattttgctgatattatctccctctatatacagccagtgaaggaattccgaccacccatgtctgaagttgtgagctctctaacgcaactaatacagaagcgtaagaaggggagaaaagatatagcagattcaagtccaaatcttggagagaacataaaggatgttaagaaatag

Protein Analysis

202

Amino Acids

22.82

Weight (kDa)

6.3

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 92, 578
AccII CGCG 1 cut(s) 61
AciI CCGC 3 cut(s) 104, 294, 358
AcsI RAATTY 4 cut(s) 145, 268, 436, 479
AcuI CTGAAG 1 cut(s) 519
AfaI GTAC 1 cut(s) 84
AfiI CCNNNNNNNGG 2 cut(s) 92, 578
AflIII ACRYGT 1 cut(s) 413
AgsI TTSAA 4 cut(s) 67, 241, 315, 567
AhlI ACTAGT 1 cut(s) 337
AjnI CCWGG 2 cut(s) 36, 194
AluBI AGCT 1 cut(s) 510
AluI AGCT 1 cut(s) 510
Alw21I GWGCWC 1 cut(s) 512
AoxI GGCC 1 cut(s) 199
ApoI RAATTY 4 cut(s) 145, 268, 436, 479
Asp700I GAANNNNTTC 1 cut(s) 479
AspS9I GGNCC 1 cut(s) 199
BanII GRGCYC 1 cut(s) 512
Bbv12I GWGCWC 1 cut(s) 512
BccI CCATC 1 cut(s) 213
BciT130I CCWGG 2 cut(s) 38, 196
BcuI ACTAGT 1 cut(s) 337
BfaI CTAG 1 cut(s) 338
BisI GCNGC 1 cut(s) 359
BlsI GCNGC 1 cut(s) 360
Bme1390I CCNGG 2 cut(s) 38, 196
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 2 cut(s) 38, 196
BmsI GCATC 1 cut(s) 166
BsaJI CCNNGG 3 cut(s) 194, 195, 320
Bsc4I CCNNNNNNNGG 2 cut(s) 92, 578
Bse1I ACTGG 1 cut(s) 470
Bse3DI GCAATG 2 cut(s) 353, 409
BseBI CCWGG 2 cut(s) 38, 196
BseDI CCNNGG 3 cut(s) 194, 195, 320
BseGI GGATG 3 cut(s) 46, 388, 601
BseLI CCNNNNNNNGG 2 cut(s) 92, 578
BseMI GCAATG 2 cut(s) 353, 409
BseNI ACTGG 1 cut(s) 470
BseRI GAGGAG 1 cut(s) 267
Bsh1236I CGCG 1 cut(s) 61
BshFI GGCC 1 cut(s) 201
BsiHKAI GWGCWC 1 cut(s) 512
BslI CCNNNNNNNGG 2 cut(s) 92, 578
BsnI GGCC 1 cut(s) 201
Bsp1286I GDGCHC 1 cut(s) 512
BspACI CCGC 3 cut(s) 104, 294, 358
BspANI GGCC 1 cut(s) 201
BspFNI CGCG 1 cut(s) 61
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 1 cut(s) 200
BspQI GCTCTTC 1 cut(s) 321
BsrDI GCAATG 2 cut(s) 353, 409
BsrI ACTGG 1 cut(s) 470
BssECI CCNNGG 3 cut(s) 194, 195, 320
BssT1I CCWWGG 1 cut(s) 320
Bst2UI CCWGG 2 cut(s) 38, 196
Bst4CI ACNGT 2 cut(s) 55, 173
Bst6I CTCTTC 2 cut(s) 236, 321
BstC8I GCNNGC 2 cut(s) 296, 300
BstF5I GGATG 3 cut(s) 46, 388, 601
BstFNI CGCG 1 cut(s) 61
BstMWI GCNNNNNNNGC 1 cut(s) 67
BstNI CCWGG 2 cut(s) 38, 196
BstNSI RCATGY 1 cut(s) 417
BstSCI CCNGG 2 cut(s) 36, 194
BstUI CGCG 1 cut(s) 61
BsuRI GGCC 1 cut(s) 201
BtsCI GGATG 3 cut(s) 46, 388, 601
BtsIMutI CAGTG 2 cut(s) 178, 477
Cac8I GCNNGC 2 cut(s) 296, 300
CciI TCATGA 1 cut(s) 364
Cfr13I GGNCC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 83
CviAII CATG 5 cut(s) 110, 230, 365, 414, 493
CviJI RGCY 9 cut(s) 96, 187, 201, 298, 350, 361, 428, 469, 510
CviKI_1 RGCY 9 cut(s) 96, 187, 201, 298, 350, 361, 428, 469, 510
CviQI GTAC 1 cut(s) 83
Eam1104I CTCTTC 2 cut(s) 236, 321
EarI CTCTTC 2 cut(s) 236, 321
Ecl136II GAGCTC 1 cut(s) 510
Eco130I CCWWGG 1 cut(s) 320
Eco24I GRGCYC 1 cut(s) 512
Eco53kI GAGCTC 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 519
EcoICRI GAGCTC 1 cut(s) 510
EcoO109I RGGNCCY 1 cut(s) 199
EcoRI GAATTC 1 cut(s) 479
EcoRII CCWGG 2 cut(s) 36, 194
EcoT14I CCWWGG 1 cut(s) 320
EcoT38I GRGCYC 1 cut(s) 512
ErhI CCWWGG 1 cut(s) 320
FaeI CATG 5 cut(s) 113, 233, 368, 417, 496
FatI CATG 5 cut(s) 109, 229, 364, 413, 492
FauI CCCGC 1 cut(s) 287
Fnu4HI GCNGC 1 cut(s) 359
FokI GGATG 2 cut(s) 53, 395
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 1 cut(s) 359
FspBI CTAG 1 cut(s) 338
GluI GCNGC 1 cut(s) 359
HaeIII GGCC 1 cut(s) 201
Hin1II CATG 5 cut(s) 113, 233, 368, 417, 496
HinfI GANTC 3 cut(s) 9, 395, 563
Hpy188I TCNGA 3 cut(s) 143, 485, 499
Hpy188III TCNNGA 4 cut(s) 6, 315, 365, 380
HpyAV CCTTC 4 cut(s) 25, 418, 469, 535
HpyCH4III ACNGT 2 cut(s) 55, 173
HpyCH4V TGCA 1 cut(s) 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 67
Hsp92II CATG 5 cut(s) 113, 233, 368, 417, 496
LguI GCTCTTC 1 cut(s) 321
LmnI GCTCC 2 cut(s) 106, 280
LpnPI CCDG 7 cut(s) 23, 50, 181, 208, 365, 384, 483
LweI GCATC 1 cut(s) 166
MaeI CTAG 1 cut(s) 338
MaeIII GTNAC 2 cut(s) 245, 287
MboII GAAGA 4 cut(s) 38, 113, 253, 338
MhlI GDGCHC 1 cut(s) 512
MluCI AATT 6 cut(s) 32, 145, 213, 268, 436, 479
MlyI GAGTC 1 cut(s) 3
MmeI TCCRAC 1 cut(s) 508
MnlI CCTC 6 cut(s) 154, 198, 212, 288, 430, 467
MroXI GAANNNNTTC 1 cut(s) 479
MseI TTAA 1 cut(s) 600
MslI CAYNNNNRTG 2 cut(s) 174, 369
MspR9I CCNGG 2 cut(s) 38, 196
MvaI CCWGG 2 cut(s) 38, 196
MvnI CGCG 1 cut(s) 61
MwoI GCNNNNNNNGC 1 cut(s) 67
NlaIII CATG 5 cut(s) 113, 233, 368, 417, 496
NlaIV GGNNCC 1 cut(s) 200
NmuCI GTSAC 2 cut(s) 245, 287
NspI RCATGY 1 cut(s) 417
PagI TCATGA 1 cut(s) 364
PasI CCCWGGG 1 cut(s) 195
PciI ACATGT 1 cut(s) 413
PciSI GCTCTTC 1 cut(s) 321
PdmI GAANNNNTTC 1 cut(s) 479
PfeI GAWTC 2 cut(s) 395, 563
PflMI CCANNNNNTGG 2 cut(s) 92, 578
PfoI TCCNGGA 1 cut(s) 36
PkrI GCNGC 1 cut(s) 360
PleI GAGTC 1 cut(s) 3
PpsI GAGTC 1 cut(s) 3
PscI ACATGT 1 cut(s) 413
Psp124BI GAGCTC 1 cut(s) 512
Psp6I CCWGG 2 cut(s) 36, 194
PspGI CCWGG 2 cut(s) 36, 194
PspN4I GGNNCC 1 cut(s) 200
PspPI GGNCC 1 cut(s) 199
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
RseI CAYNNNNRTG 2 cut(s) 174, 369
SacI GAGCTC 1 cut(s) 512
SapI GCTCTTC 1 cut(s) 321
SaqAI TTAA 1 cut(s) 600
SatI GCNGC 1 cut(s) 359
Sau96I GGNCC 1 cut(s) 199
SchI GAGTC 1 cut(s) 3
ScrFI CCNGG 2 cut(s) 38, 196
SduI GDGCHC 1 cut(s) 512
SetI ASST 1 cut(s) 512
SfaNI GCATC 1 cut(s) 166
SmiMI CAYNNNNRTG 2 cut(s) 174, 369
SpeI ACTAGT 1 cut(s) 337
Sse9I AATT 6 cut(s) 32, 145, 213, 268, 436, 479
SsiI CCGC 3 cut(s) 104, 294, 358
SspMI CTAG 1 cut(s) 338
SstI GAGCTC 1 cut(s) 512
StyD4I CCNGG 2 cut(s) 36, 194
StyI CCWWGG 1 cut(s) 320
TaaI ACNGT 2 cut(s) 55, 173
TaqI TCGA 1 cut(s) 422
TasI AATT 6 cut(s) 32, 145, 213, 268, 436, 479
TauI GCSGC 1 cut(s) 361
TfiI GAWTC 2 cut(s) 395, 563
Tru1I TTAA 1 cut(s) 600
Tru9I TTAA 1 cut(s) 600
TscAI CASTG 2 cut(s) 178, 477
TseFI GTSAC 2 cut(s) 245, 287
Tsp45I GTSAC 2 cut(s) 245, 287
TspDTI ATGAA 5 cut(s) 279, 342, 353, 387, 420
TspRI CASTG 2 cut(s) 178, 477
Van91I CCANNNNNTGG 2 cut(s) 92, 578
XapI RAATTY 4 cut(s) 145, 268, 436, 479
XceI RCATGY 1 cut(s) 417
XmnI GAANNNNTTC 1 cut(s) 479
XspI CTAG 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.