Rh2BG551900

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
76045217 .. 76047705
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG551900.1

Sequence Viewer

Length: 861 bp
ATGGCGACGCAGTACGTGGTTTTCACAGTGCTTGTCATGGCGGTGGTTATGGCTTCTCAGGCTGAGGCTTTTACTGATCCACTTGAAGTCACAGCTCTTCAAGAGATTTACAAGTCCCTTAACACACCGCCACAGCTGATCGGTTGGAGATTGGATGGTGGGGATCCTTGCGATGAATCATGGAATGGAGTGTCCTGTTTTGGCTCCTCTGTGATGTACCTTGAGCTTTATGGTCTAGACCTCTCTGGGTCTATTACTGCCGCGCTGTATAATCTGAAAAAATTGAAGCAACTGGACATTAGTTCCAATAGCATTGGTGGTGAACTTCCATGTGTGTTACCCCCTCATGCAACTCATATAAATATGGCACGCAACAAATTCACTGGAAATATCCCCCAGAGTTTATCTGACATGAAATATCTTGTGTATTTGAATCTAAGCCGCAATTTGTTATCAGGACCCATTGGCAATGTTTTTAATGGCCTACAAAGTCTAAAGCAATTGGATTTGTCTTATAATAATTTTACTGGAGATGTGCACAGTTCATTTGGATCTCTTTCTAATCTCACTGGATTGTACTTGCAGAATAATCAATTCACTCCATCAGTTGTTTATCCAGTAATTGATATGAAAATCCAAGAAAACTATGGTGTCGTCCCAAACCATTTTCAGTCCATACCAAATTTGTGGATCGGGGGTAATGGTTGTGAAGTATCGGGGAACAACTGTCCACCCTGGGATGTTCCTCTGGAAACCAAGGCAAGGGACTCAGAACAAAACACCTATCTCCCTCCAGCAACTCAGTCAGCGTTAAGAACTCAGGACACAAGAATAAGAAGCTTGGAATATTCGTCACTATAA

Protein Analysis

286

Amino Acids

31.44

Weight (kDa)

4.92

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 66 5e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 158 - 199 2.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 516
AccII CGCG 1 cut(s) 263
AciI CCGC 4 cut(s) 41, 128, 261, 442
AclWI GGATC 5 cut(s) 71, 158, 171, 559, 698
AcsI RAATTY 2 cut(s) 377, 682
AfaI GTAC 3 cut(s) 14, 218, 578
AfiI CCNNNNNNNGG 1 cut(s) 762
AgsI TTSAA 4 cut(s) 86, 101, 286, 433
AjnI CCWGG 1 cut(s) 734
AluBI AGCT 4 cut(s) 95, 136, 226, 840
AluI AGCT 4 cut(s) 95, 136, 226, 840
Alw21I GWGCWC 1 cut(s) 540
Alw44I GTGCAC 1 cut(s) 536
AlwI GGATC 5 cut(s) 71, 158, 171, 559, 698
AoxI GGCC 1 cut(s) 481
ApaLI GTGCAC 1 cut(s) 536
ApoI RAATTY 2 cut(s) 377, 682
AspLEI GCGC 1 cut(s) 265
AspS9I GGNCC 1 cut(s) 458
AsuHPI GGTGA 1 cut(s) 332
AvaII GGWCC 1 cut(s) 458
BaeGI GKGCMC 1 cut(s) 540
BamHI GGATCC 1 cut(s) 163
Bbv12I GWGCWC 1 cut(s) 540
BbvCI CCTCAGC 1 cut(s) 63
BccI CCATC 2 cut(s) 149, 610
BciT130I CCWGG 1 cut(s) 736
BfaI CTAG 1 cut(s) 236
BisI GCNGC 2 cut(s) 261, 442
BlsI GCNGC 2 cut(s) 262, 443
Bme1390I CCNGG 1 cut(s) 736
Bme18I GGWCC 1 cut(s) 458
BmgT120I GGNCC 1 cut(s) 458
BmiI GGNNCC 3 cut(s) 165, 205, 460
BmrFI CCNGG 1 cut(s) 736
BpmI CTGGAG 2 cut(s) 549, 777
Bpu10I CCTNAGC 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 242
BsaAI YACGTR 1 cut(s) 16
BsaJI CCNNGG 3 cut(s) 734, 735, 756
Bsc4I CCNNNNNNNGG 1 cut(s) 762
Bse1I ACTGG 5 cut(s) 297, 388, 532, 574, 617
Bse3DI GCAATG 1 cut(s) 475
BseBI CCWGG 1 cut(s) 736
BseDI CCNNGG 3 cut(s) 734, 735, 756
BseGI GGATG 2 cut(s) 160, 745
BseLI CCNNNNNNNGG 1 cut(s) 762
BseMI GCAATG 1 cut(s) 475
BseMII CTCAG 5 cut(s) 54, 71, 783, 815, 833
BseNI ACTGG 5 cut(s) 297, 388, 532, 574, 617
BseRI GAGGAG 1 cut(s) 196
BseSI GKGCMC 1 cut(s) 540
Bsh1236I CGCG 1 cut(s) 263
BshFI GGCC 1 cut(s) 483
BsiHKAI GWGCWC 1 cut(s) 540
BslFI GGGAC 3 cut(s) 100, 641, 779
BslI CCNNNNNNNGG 1 cut(s) 762
BsmFI GGGAC 3 cut(s) 100, 641, 779
BsnI GGCC 1 cut(s) 483
Bsp1286I GDGCHC 1 cut(s) 540
Bsp143I GATC 5 cut(s) 76, 138, 163, 551, 690
BspACI CCGC 4 cut(s) 41, 128, 261, 442
BspANI GGCC 1 cut(s) 483
BspCNI CTCAG 5 cut(s) 55, 70, 782, 814, 832
BspFNI CGCG 1 cut(s) 263
BspLI GGNNCC 3 cut(s) 165, 205, 460
BspPI GGATC 5 cut(s) 71, 158, 171, 559, 698
BspQI GCTCTTC 1 cut(s) 102
BsrDI GCAATG 1 cut(s) 475
BsrI ACTGG 5 cut(s) 297, 388, 532, 574, 617
BssECI CCNNGG 3 cut(s) 734, 735, 756
BssMI GATC 5 cut(s) 76, 138, 163, 551, 690
BssT1I CCWWGG 1 cut(s) 756
Bst2UI CCWGG 1 cut(s) 736
Bst4CI ACNGT 3 cut(s) 28, 542, 728
Bst6I CTCTTC 1 cut(s) 102
BstBAI YACGTR 1 cut(s) 16
BstC8I GCNNGC 1 cut(s) 370
BstDEI CTNAG 6 cut(s) 57, 63, 437, 769, 801, 819
BstF5I GGATG 2 cut(s) 160, 745
BstFNI CGCG 1 cut(s) 263
BstHHI GCGC 1 cut(s) 265
BstKTI GATC 5 cut(s) 79, 141, 166, 554, 693
BstMBI GATC 5 cut(s) 76, 138, 163, 551, 690
BstMWI GCNNNNNNNGC 1 cut(s) 59
BstNI CCWGG 1 cut(s) 736
BstSCI CCNGG 1 cut(s) 734
BstSLI GKGCMC 1 cut(s) 540
BstUI CGCG 1 cut(s) 263
BstX2I RGATCY 2 cut(s) 163, 551
BstXI CCANNNNNNTGG 1 cut(s) 687
BstYI RGATCY 2 cut(s) 163, 551
BsuRI GGCC 1 cut(s) 483
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 2 cut(s) 160, 745
BtsIMutI CAGTG 3 cut(s) 33, 381, 567
Cac8I GCNNGC 1 cut(s) 370
CfoI GCGC 1 cut(s) 265
Cfr13I GGNCC 1 cut(s) 458
CseI GACGC 1 cut(s) 16
Csp6I GTAC 3 cut(s) 13, 217, 577
CviAII CATG 5 cut(s) 37, 180, 330, 347, 412
CviQI GTAC 3 cut(s) 13, 217, 577
DdeI CTNAG 6 cut(s) 57, 63, 437, 769, 801, 819
DpnI GATC 5 cut(s) 78, 140, 165, 553, 692
DpnII GATC 5 cut(s) 76, 138, 163, 551, 690
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
Eco130I CCWWGG 1 cut(s) 756
Eco47I GGWCC 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 458
EcoRII CCWGG 1 cut(s) 734
EcoT14I CCWWGG 1 cut(s) 756
ErhI CCWWGG 1 cut(s) 756
FaeI CATG 5 cut(s) 40, 183, 333, 350, 415
FaqI GGGAC 3 cut(s) 100, 641, 779
FatI CATG 5 cut(s) 36, 179, 329, 346, 411
Fnu4HI GCNGC 2 cut(s) 261, 442
FokI GGATG 2 cut(s) 167, 752
Fsp4HI GCNGC 2 cut(s) 261, 442
FspBI CTAG 1 cut(s) 236
GlaI GCGC 1 cut(s) 264
GluI GCNGC 2 cut(s) 261, 442
GsuI CTGGAG 2 cut(s) 549, 777
HaeIII GGCC 1 cut(s) 483
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 265
Hin1II CATG 5 cut(s) 40, 183, 333, 350, 415
Hin6I GCGC 1 cut(s) 263
HinP1I GCGC 1 cut(s) 263
HindIII AAGCTT 1 cut(s) 838
HinfI GANTC 3 cut(s) 176, 433, 767
HphI GGTGA 1 cut(s) 332
Hpy166II GTNNAC 3 cut(s) 323, 538, 731
Hpy188I TCNGA 3 cut(s) 276, 409, 772
Hpy188III TCNNGA 5 cut(s) 101, 236, 456, 749, 821
Hpy8I GTNNAC 3 cut(s) 323, 538, 731
Hpy99I CGWCG 1 cut(s) 10
HpyCH4III ACNGT 3 cut(s) 28, 542, 728
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 3 cut(s) 350, 538, 583
HpyF10VI GCNNNNNNNGC 1 cut(s) 59
HpyF3I CTNAG 6 cut(s) 57, 63, 437, 769, 801, 819
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 5 cut(s) 40, 183, 333, 350, 415
HspAI GCGC 1 cut(s) 263
Kzo9I GATC 5 cut(s) 76, 138, 163, 551, 690
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 1 cut(s) 209
MaeI CTAG 1 cut(s) 236
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 3 cut(s) 88, 336, 852
MalI GATC 5 cut(s) 78, 140, 165, 553, 692
MboI GATC 5 cut(s) 76, 138, 163, 551, 690
MboII GAAGA 1 cut(s) 89
MfeI CAATTG 1 cut(s) 500
MflI RGATCY 2 cut(s) 163, 551
MhlI GDGCHC 1 cut(s) 540
MluCI AATT 8 cut(s) 281, 377, 445, 500, 520, 593, 621, 682
MlyI GAGTC 1 cut(s) 761
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 6 cut(s) 58, 217, 251, 354, 756, 801
MseI TTAA 3 cut(s) 120, 477, 812
MslI CAYNNNNRTG 1 cut(s) 41
MspA1I CMGCKG 1 cut(s) 136
MspR9I CCNGG 1 cut(s) 736
MunI CAATTG 1 cut(s) 500
MvaI CCWGG 1 cut(s) 736
MvnI CGCG 1 cut(s) 263
MwoI GCNNNNNNNGC 1 cut(s) 59
NdeII GATC 5 cut(s) 76, 138, 163, 551, 690
NlaIII CATG 5 cut(s) 40, 183, 333, 350, 415
NlaIV GGNNCC 3 cut(s) 165, 205, 460
NmuCI GTSAC 2 cut(s) 88, 852
PasI CCCWGGG 1 cut(s) 735
PciSI GCTCTTC 1 cut(s) 102
PfeI GAWTC 2 cut(s) 176, 433
PkrI GCNGC 2 cut(s) 262, 443
PleI GAGTC 1 cut(s) 761
PpsI GAGTC 1 cut(s) 761
Ppu21I YACGTR 1 cut(s) 16
PpuMI RGGWCCY 1 cut(s) 458
PsiI TTATAA 1 cut(s) 516
Psp5II RGGWCCY 1 cut(s) 458
Psp6I CCWGG 1 cut(s) 734
PspGI CCWGG 1 cut(s) 734
PspN4I GGNNCC 3 cut(s) 165, 205, 460
PspPI GGNCC 1 cut(s) 458
PspPPI RGGWCCY 1 cut(s) 458
PsuI RGATCY 2 cut(s) 163, 551
PvuII CAGCTG 1 cut(s) 136
RsaI GTAC 3 cut(s) 14, 218, 578
RsaNI GTAC 3 cut(s) 13, 217, 577
RseI CAYNNNNRTG 1 cut(s) 41
SapI GCTCTTC 1 cut(s) 102
SaqAI TTAA 3 cut(s) 120, 477, 812
SatI GCNGC 2 cut(s) 261, 442
Sau3AI GATC 5 cut(s) 76, 138, 163, 551, 690
Sau96I GGNCC 1 cut(s) 458
SchI GAGTC 1 cut(s) 761
ScrFI CCNGG 1 cut(s) 736
SduI GDGCHC 1 cut(s) 540
SetI ASST 8 cut(s) 18, 97, 138, 222, 228, 243, 785, 842
SinI GGWCC 1 cut(s) 458
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 8 cut(s) 281, 377, 445, 500, 520, 593, 621, 682
SsiI CCGC 4 cut(s) 41, 128, 261, 442
SspI AATATT 1 cut(s) 848
SspMI CTAG 1 cut(s) 236
StyD4I CCNGG 1 cut(s) 734
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 3 cut(s) 28, 542, 728
TaiI ACGT 1 cut(s) 18
TasI AATT 8 cut(s) 281, 377, 445, 500, 520, 593, 621, 682
TatI WGTACW 1 cut(s) 576
TauI GCSGC 2 cut(s) 263, 444
TfiI GAWTC 2 cut(s) 176, 433
Tru1I TTAA 3 cut(s) 120, 477, 812
Tru9I TTAA 3 cut(s) 120, 477, 812
TscAI CASTG 3 cut(s) 33, 388, 574
TseFI GTSAC 2 cut(s) 88, 852
Tsp45I GTSAC 2 cut(s) 88, 852
TspDTI ATGAA 4 cut(s) 189, 428, 534, 644
TspRI CASTG 3 cut(s) 33, 388, 574
VneI GTGCAC 1 cut(s) 536
VpaK11BI GGWCC 1 cut(s) 458
XapI RAATTY 2 cut(s) 377, 682
XbaI TCTAGA 1 cut(s) 235
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XspI CTAG 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.