Rmu_sc0009296.1_g000015

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009296.1
Physical Location & Seq
Forward (+)
36776 .. 38145
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009296.1_g000015.1.cds

Sequence Viewer

Length: 333 bp
atgtggatggttggaattgcagaggtgatcgggattgggaggtgggaagagagatggggtgctgatagagtcattattttggctgtaaataacatcaagatgtctggactctccttccataaagaagaacaattcctggatgtcgtttggactgtttcgcgtttgaagcacccaaacattgtaccacttgttggctattgtgcggagcatggacaacatcttcttgtgtatgattatgtcagaaatttatcccttgatgaggcacttcacagtgatgcacacaagcctctatcctggggcctccgtttccaaattgctcttggtgttgcttaa

Protein Analysis

110

Amino Acids

12.53

Weight (kDa)

6.27

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 191
AccII CGCG 1 cut(s) 160
AciI CCGC 1 cut(s) 203
AcsI RAATTY 1 cut(s) 244
AfaI GTAC 1 cut(s) 183
AfiI CCNNNNNNNGG 2 cut(s) 191, 259
AgsI TTSAA 1 cut(s) 166
AjnI CCWGG 2 cut(s) 135, 293
AoxI GGCC 1 cut(s) 298
ApoI RAATTY 1 cut(s) 244
AspS9I GGNCC 1 cut(s) 298
AsuHPI GGTGA 1 cut(s) 37
BccI CCATC 1 cut(s) 48
BciT130I CCWGG 2 cut(s) 137, 295
Bme1390I CCNGG 2 cut(s) 137, 295
BmgT120I GGNCC 1 cut(s) 298
BmiI GGNNCC 1 cut(s) 299
BmrFI CCNGG 2 cut(s) 137, 295
BmsI GCATC 1 cut(s) 265
BsaJI CCNNGG 1 cut(s) 294
Bsc4I CCNNNNNNNGG 2 cut(s) 191, 259
BseBI CCWGG 2 cut(s) 137, 295
BseDI CCNNGG 1 cut(s) 294
BseGI GGATG 2 cut(s) 12, 145
BseLI CCNNNNNNNGG 2 cut(s) 191, 259
Bsh1236I CGCG 1 cut(s) 160
BshFI GGCC 1 cut(s) 300
BslI CCNNNNNNNGG 2 cut(s) 191, 259
BsnI GGCC 1 cut(s) 300
Bsp143I GATC 1 cut(s) 27
BspACI CCGC 1 cut(s) 203
BspANI GGCC 1 cut(s) 300
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 1 cut(s) 299
BssECI CCNNGG 1 cut(s) 294
BssMI GATC 1 cut(s) 27
Bst2UI CCWGG 2 cut(s) 137, 295
Bst4CI ACNGT 2 cut(s) 154, 272
Bst6I CTCTTC 1 cut(s) 42
BstENI CCTNNNNNAGG 1 cut(s) 257
BstF5I GGATG 2 cut(s) 12, 145
BstFNI CGCG 1 cut(s) 160
BstKTI GATC 1 cut(s) 30
BstMBI GATC 1 cut(s) 27
BstMWI GCNNNNNNNGC 1 cut(s) 166
BstNI CCWGG 2 cut(s) 137, 295
BstSCI CCNGG 2 cut(s) 135, 293
BstUI CGCG 1 cut(s) 160
BsuRI GGCC 1 cut(s) 300
BtsCI GGATG 2 cut(s) 12, 145
BtsIMutI CAGTG 1 cut(s) 277
Cfr13I GGNCC 1 cut(s) 298
Csp6I GTAC 1 cut(s) 182
CviAII CATG 1 cut(s) 209
CviJI RGCY 4 cut(s) 83, 195, 286, 300
CviKI_1 RGCY 4 cut(s) 83, 195, 286, 300
CviQI GTAC 1 cut(s) 182
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
EcoNI CCTNNNNNAGG 1 cut(s) 257
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 2 cut(s) 135, 293
FaeI CATG 1 cut(s) 212
FaiI YATR 4 cut(s) 120, 210, 231, 237
FatI CATG 1 cut(s) 208
FokI GGATG 2 cut(s) 19, 152
HaeIII GGCC 1 cut(s) 300
Hin1II CATG 1 cut(s) 212
HinfI GANTC 2 cut(s) 69, 108
HphI GGTGA 1 cut(s) 37
Hpy188I TCNGA 1 cut(s) 242
Hpy188III TCNNGA 3 cut(s) 31, 97, 105
HpyAV CCTTC 1 cut(s) 124
HpyCH4III ACNGT 2 cut(s) 154, 272
HpyCH4V TGCA 2 cut(s) 20, 278
HpyF10VI GCNNNNNNNGC 1 cut(s) 166
Hsp92II CATG 1 cut(s) 212
Kzo9I GATC 1 cut(s) 27
LmnI GCTCC 1 cut(s) 205
LpnPI CCDG 5 cut(s) 90, 122, 149, 280, 307
LweI GCATC 1 cut(s) 265
MalI GATC 1 cut(s) 29
MboI GATC 1 cut(s) 27
MboII GAAGA 3 cut(s) 59, 137, 212
MluCI AATT 4 cut(s) 15, 131, 244, 312
MlyI GAGTC 2 cut(s) 78, 102
MnlI CCTC 5 cut(s) 16, 33, 253, 297, 311
MseI TTAA 1 cut(s) 331
MslI CAYNNNNRTG 2 cut(s) 98, 273
MspR9I CCNGG 2 cut(s) 137, 295
MvaI CCWGG 2 cut(s) 137, 295
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 1 cut(s) 166
NdeII GATC 1 cut(s) 27
NlaIII CATG 1 cut(s) 212
NlaIV GGNNCC 1 cut(s) 299
PflMI CCANNNNNTGG 1 cut(s) 191
PfoI TCCNGGA 1 cut(s) 135
PleI GAGTC 2 cut(s) 77, 102
PpsI GAGTC 2 cut(s) 77, 102
Psp6I CCWGG 2 cut(s) 135, 293
PspGI CCWGG 2 cut(s) 135, 293
PspN4I GGNNCC 1 cut(s) 299
PspPI GGNCC 1 cut(s) 298
RsaI GTAC 1 cut(s) 183
RsaNI GTAC 1 cut(s) 182
RseI CAYNNNNRTG 2 cut(s) 98, 273
SaqAI TTAA 1 cut(s) 331
Sau3AI GATC 1 cut(s) 27
Sau96I GGNCC 1 cut(s) 298
SchI GAGTC 2 cut(s) 78, 102
ScrFI CCNGG 2 cut(s) 137, 295
SetI ASST 2 cut(s) 27, 44
SfaNI GCATC 1 cut(s) 265
SmiMI CAYNNNNRTG 2 cut(s) 98, 273
Sse9I AATT 4 cut(s) 15, 131, 244, 312
SsiI CCGC 1 cut(s) 203
StyD4I CCNGG 2 cut(s) 135, 293
TaaI ACNGT 2 cut(s) 154, 272
TasI AATT 4 cut(s) 15, 131, 244, 312
Tru1I TTAA 1 cut(s) 331
Tru9I TTAA 1 cut(s) 331
TscAI CASTG 1 cut(s) 277
TspGWI ACGGA 1 cut(s) 293
TspRI CASTG 1 cut(s) 277
Van91I CCANNNNNTGG 1 cut(s) 191
XagI CCTNNNNNAGG 1 cut(s) 257
XapI RAATTY 1 cut(s) 244
XcmI CCANNNNNNNNNTGG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.