RchiOBHm_Chr3g0476831

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
22799976 .. 22801307
1332 bp
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UTR
Exon/CDS
Intron
PRQ44221

Sequence Viewer

Length: 252 bp
ATGCACACCACCTGTTTGATGAAAGTTCCAATCGTAGCTCTTCAACATCTCTACAAGACCCTCAACCAACCGCCACAGCTGACGGGTTGGAGATTGGATGGTGGGGATCCTTGCGATCAAGACTGGAATGGAGGGTCAAGCTTTGGCTCTGCTATTACATTACTGTACCTTAAAGGTCTGAATCTGACTGGGTACATCAGTCCTAAGATCATATTAGAGAATCTTCAAATGGGCCAGGTCGGGTTCTATTAA

Protein Analysis

83

Amino Acids

9.18

Weight (kDa)

6.69

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 71
AclWI GGATC 2 cut(s) 101, 114
AfaI GTAC 2 cut(s) 167, 194
AgsI TTSAA 2 cut(s) 44, 227
AjnI CCWGG 1 cut(s) 234
AluBI AGCT 3 cut(s) 38, 79, 141
AluI AGCT 3 cut(s) 38, 79, 141
AlwI GGATC 2 cut(s) 101, 114
AoxI GGCC 1 cut(s) 232
AspS9I GGNCC 1 cut(s) 232
BaeI ACNNNNGTAYC 2 cut(s) 184, 217
BamHI GGATCC 1 cut(s) 106
BccI CCATC 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 236
Bme1390I CCNGG 1 cut(s) 236
BmgT120I GGNCC 1 cut(s) 232
BmiI GGNNCC 1 cut(s) 108
BmrFI CCNGG 1 cut(s) 236
BmrI ACTGGG 1 cut(s) 198
BmuI ACTGGG 1 cut(s) 198
Bse1I ACTGG 2 cut(s) 128, 193
BseBI CCWGG 1 cut(s) 236
BseGI GGATG 1 cut(s) 103
BseNI ACTGG 2 cut(s) 128, 193
BshFI GGCC 1 cut(s) 234
BsnI GGCC 1 cut(s) 234
Bsp143I GATC 3 cut(s) 106, 115, 207
BspACI CCGC 1 cut(s) 71
BspANI GGCC 1 cut(s) 234
BspLI GGNNCC 1 cut(s) 108
BspPI GGATC 2 cut(s) 101, 114
BspQI GCTCTTC 1 cut(s) 45
BsrI ACTGG 2 cut(s) 128, 193
BssMI GATC 3 cut(s) 106, 115, 207
Bst2UI CCWGG 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 165
Bst6I CTCTTC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 204
BstF5I GGATG 1 cut(s) 103
BstKTI GATC 3 cut(s) 109, 118, 210
BstMBI GATC 3 cut(s) 106, 115, 207
BstNI CCWGG 1 cut(s) 236
BstSCI CCNGG 1 cut(s) 234
BstX2I RGATCY 1 cut(s) 106
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 1 cut(s) 234
BtsCI GGATG 1 cut(s) 103
Cfr13I GGNCC 1 cut(s) 232
Csp6I GTAC 2 cut(s) 166, 193
CviJI RGCY 5 cut(s) 38, 79, 141, 147, 234
CviKI_1 RGCY 5 cut(s) 38, 79, 141, 147, 234
CviQI GTAC 2 cut(s) 166, 193
DdeI CTNAG 1 cut(s) 204
DpnI GATC 3 cut(s) 108, 117, 209
DpnII GATC 3 cut(s) 106, 115, 207
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
EcoRII CCWGG 1 cut(s) 234
FaiI YATR 1 cut(s) 212
FokI GGATG 1 cut(s) 110
HaeIII GGCC 1 cut(s) 234
HindIII AAGCTT 1 cut(s) 139
HinfI GANTC 2 cut(s) 181, 220
Hpy188I TCNGA 2 cut(s) 180, 186
Hpy188III TCNNGA 1 cut(s) 119
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 204
Kzo9I GATC 3 cut(s) 106, 115, 207
LguI GCTCTTC 1 cut(s) 45
LpnPI CCDG 5 cut(s) 25, 109, 174, 221, 248
MalI GATC 3 cut(s) 108, 117, 209
MboI GATC 3 cut(s) 106, 115, 207
MboII GAAGA 2 cut(s) 32, 215
MflI RGATCY 1 cut(s) 106
MmeI TCCRAC 1 cut(s) 68
MnlI CCTC 2 cut(s) 71, 125
MseI TTAA 2 cut(s) 171, 250
MspA1I CMGCKG 1 cut(s) 79
MspR9I CCNGG 1 cut(s) 236
MvaI CCWGG 1 cut(s) 236
NdeII GATC 3 cut(s) 106, 115, 207
NlaIV GGNNCC 1 cut(s) 108
PciSI GCTCTTC 1 cut(s) 45
PfeI GAWTC 2 cut(s) 181, 220
Psp6I CCWGG 1 cut(s) 234
PspGI CCWGG 1 cut(s) 234
PspN4I GGNNCC 1 cut(s) 108
PspPI GGNCC 1 cut(s) 232
PsuI RGATCY 1 cut(s) 106
PvuII CAGCTG 1 cut(s) 79
RsaI GTAC 2 cut(s) 167, 194
RsaNI GTAC 2 cut(s) 166, 193
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 2 cut(s) 171, 250
Sau3AI GATC 3 cut(s) 106, 115, 207
Sau96I GGNCC 1 cut(s) 232
ScrFI CCNGG 1 cut(s) 236
SetI ASST 7 cut(s) 14, 40, 81, 143, 171, 178, 240
SsiI CCGC 1 cut(s) 71
StyD4I CCNGG 1 cut(s) 234
TaaI ACNGT 1 cut(s) 165
TfiI GAWTC 2 cut(s) 181, 220
Tru1I TTAA 2 cut(s) 171, 250
Tru9I TTAA 2 cut(s) 171, 250
TspDTI ATGAA 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.