RLG00000024125

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
32204028 .. 32207121
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024125

Sequence Viewer

Length: 1317 bp
ATGACGTGGCTTTCGACCATCAGCGATTCCCAATTTCATAACAGAAAATTGGCGGGAAAGCTAGATTTCCCTGATTTTCAAGAGCATGGCGACCAAGTATCAGTACGTGTTTTTGACGGTGCTTTTCATGGCGGTTGTTATGGCTTCTCCGCTGAGGCTTTTACTGATCCACTCGACGCCACAGCTCTTCAAGAGCTTTACAAATCCCTTAACGGTCCACCACAGCTGACGGGTTGGAGATTGGGTGGCGGCGATCCTTGCGATGAATCGTGGACTGGAGTGTCATGTTCTGGGTCTCATGTTACAGAGATTGAGCTTCATGGTCTAAACCTTTCTGGGTTTATTTCTGCTGGGCTCCATAATCTCTACTACTTGAAGCGAATGGACATTAATTCCAATAATATCAGTGGTGAAATTCCATATGTGCTACCGCCTAATGCAACTCATATTGACATGGCGTGCAATTCCCTTACCAATAGTATTCCGCAATGTTTAGGTGGCATGAAACATCTTCAATACTTAAATCTGAGCCACAATATGTTATCTGGAGCCATAGGCAACATTTTTACTGGCCTCAAGAATTTAAGACAACTGGATTTGTCCTACAATAATTTTACCGCTCTGCCAAGTTCGTTTGGATCCCTCACAAATCTCAATGGATTGTACTTGCACGATAACCGATTGACTGGATCACTTACTTCTCGGTCCAGTGCTGACAAGAAATGGCTTGTCGTTGTCTGCATAAGCTTTGTAGTCGTTGCTGCTGTGTTTGCTTGTTGTATGGCATCATACCATTGTACTGCTCAACCAGGTCAACACCGCATTGGTGCTGCTGCTCAACCTGATCAGAACGACCACATTCCCGCCGTTGCTCAACCAGGGCAGCAAGCTGCCATTGCTGCTGCTGCTCAACCAGGGCAGCAAGCTGCCATTGCTGTTGCTGCTCAACCAGGCCAACAACCTGCCATTGCTGCTGTTGCTCAACCAGGCCAACAAGCCCCCATTGCTGGTTCTGCTCAATCCCCCTTCATTATTTCCCCTGATCCTGATGTCTTACCTGCCACTTACATCTCCTCAAAGAAGAAACGGAAAATATCCTTTGGAATATTTGAAGGTGGTATCTGGCAGATGTCCGATGGAATTAGAACTCATACTGCAGATTCTCGTGAGAAAGTGATAAAACTGGCATCTCCTGCACCGAGGGTTGAGCAGCCAAGGAGAAAGATGAGTTTCATAAACCAAGACAATGAAGTAGAAGAGTATGCAATGGTAGATGATGATGATGATGATGAATGTAAGAAAAAGACACTCCAGTAG

Protein Analysis

439

Amino Acids

47.23

Weight (kDa)

5.84

Isoelectric Point (pI)

49.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 59 - 97 1.7e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 153 - 228 5.6e-07 Leucine-rich repeat region
LRR_8 PF13855 188 - 228 3.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 280
Acc36I ACCTGC 2 cut(s) 970, 1066
AccBSI CCGCTC 1 cut(s) 620
AciI CCGC 9 cut(s) 53, 132, 150, 249, 431, 485, 618, 820, 864
AclWI GGATC 6 cut(s) 161, 248, 633, 646, 697, 1037
AcsI RAATTY 2 cut(s) 414, 580
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 3 cut(s) 105, 665, 799
AfiI CCNNNNNNNGG 1 cut(s) 1007
AflIII ACRYGT 1 cut(s) 106
AgsI TTSAA 5 cut(s) 80, 191, 376, 515, 1112
AjiI CACGTC 1 cut(s) 6
AjnI CCWGG 5 cut(s) 808, 877, 913, 949, 985
AluBI AGCT 8 cut(s) 61, 185, 196, 226, 316, 747, 890, 926
AluI AGCT 8 cut(s) 61, 185, 196, 226, 316, 747, 890, 926
Alw26I GTCTC 1 cut(s) 300
AlwI GGATC 6 cut(s) 161, 248, 633, 646, 697, 1037
AoxI GGCC 3 cut(s) 571, 952, 988
ApoI RAATTY 2 cut(s) 414, 580
ArsI GACNNNNNNTTYG 1 cut(s) 27
AseI ATTAAT 1 cut(s) 390
AspS9I GGNCC 2 cut(s) 215, 705
AsuHPI GGTGA 1 cut(s) 422
AvaII GGWCC 2 cut(s) 215, 705
BamHI GGATCC 1 cut(s) 638
BanII GRGCYC 1 cut(s) 357
BauI CACGAG 1 cut(s) 1164
BbvCI CCTCAGC 1 cut(s) 153
BccI CCATC 2 cut(s) 26, 1130
BceAI ACGGC 1 cut(s) 851
BciT130I CCWGG 5 cut(s) 810, 879, 915, 951, 987
BclI TGATCA 1 cut(s) 844
BcoDI GTCTC 1 cut(s) 300
BfaI CTAG 1 cut(s) 62
BfmI CTRYAG 1 cut(s) 1155
BfuAI ACCTGC 2 cut(s) 970, 1066
Bme1390I CCNGG 5 cut(s) 810, 879, 915, 951, 987
Bme18I GGWCC 2 cut(s) 215, 705
BmgBI CACGTC 1 cut(s) 6
BmgT120I GGNCC 2 cut(s) 215, 705
BmiI GGNNCC 3 cut(s) 356, 550, 640
BmrFI CCNGG 5 cut(s) 810, 879, 915, 951, 987
BmsI GCATC 2 cut(s) 794, 1196
BpmI CTGGAG 3 cut(s) 297, 567, 1295
Bpu10I CCTNAGC 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 560
BsaAI YACGTR 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 4 cut(s) 878, 914, 1199, 1214
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bsc4I CCNNNNNNNGG 1 cut(s) 1007
Bse1I ACTGG 7 cut(s) 280, 574, 597, 691, 708, 1188, 1312
Bse3DI GCAATG 6 cut(s) 494, 894, 930, 966, 1002, 1272
BseBI CCWGG 5 cut(s) 810, 879, 915, 951, 987
BseDI CCNNGG 4 cut(s) 878, 914, 1199, 1214
BseLI CCNNNNNNNGG 1 cut(s) 1007
BseMI GCAATG 6 cut(s) 494, 894, 930, 966, 1002, 1272
BseMII CTCAG 2 cut(s) 144, 518
BseNI ACTGG 7 cut(s) 280, 574, 597, 691, 708, 1188, 1312
BseRI GAGGAG 1 cut(s) 1063
BseYI CCCAGC 1 cut(s) 350
BsgI GTGCAG 1 cut(s) 1179
BshFI GGCC 3 cut(s) 573, 954, 990
BslI CCNNNNNNNGG 1 cut(s) 1007
BsmAI GTCTC 1 cut(s) 300
BsnI GGCC 3 cut(s) 573, 954, 990
Bso31I GGTCTC 1 cut(s) 300
Bsp1286I GDGCHC 1 cut(s) 357
Bsp143I GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
BspACI CCGC 9 cut(s) 53, 132, 150, 249, 431, 485, 618, 820, 864
BspANI GGCC 3 cut(s) 573, 954, 990
BspCNI CTCAG 2 cut(s) 145, 519
BspLI GGNNCC 3 cut(s) 356, 550, 640
BspMAI CTGCAG 1 cut(s) 1159
BspMI ACCTGC 2 cut(s) 970, 1066
BspPI GGATC 6 cut(s) 161, 248, 633, 646, 697, 1037
BspQI GCTCTTC 1 cut(s) 192
BspTNI GGTCTC 1 cut(s) 300
BsrBI CCGCTC 1 cut(s) 620
BsrDI GCAATG 6 cut(s) 494, 894, 930, 966, 1002, 1272
BsrI ACTGG 7 cut(s) 280, 574, 597, 691, 708, 1188, 1312
BssECI CCNNGG 4 cut(s) 878, 914, 1199, 1214
BssMI GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
BssNI GRCGYC 1 cut(s) 177
BssSI CACGAG 1 cut(s) 1164
BssT1I CCWWGG 1 cut(s) 1214
Bst2BI CACGAG 1 cut(s) 1164
Bst2UI CCWGG 5 cut(s) 810, 879, 915, 951, 987
Bst4CI ACNGT 2 cut(s) 119, 215
Bst6I CTCTTC 2 cut(s) 192, 1251
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 1193
BstBAI YACGTR 1 cut(s) 107
BstC8I GCNNGC 3 cut(s) 460, 888, 924
BstDEI CTNAG 2 cut(s) 153, 527
BstKTI GATC 6 cut(s) 169, 256, 641, 692, 847, 1045
BstMAI GTCTC 1 cut(s) 300
BstMBI GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
BstNI CCWGG 5 cut(s) 810, 879, 915, 951, 987
BstSCI CCNGG 5 cut(s) 808, 877, 913, 949, 985
BstSFI CTRYAG 1 cut(s) 1155
BstX2I RGATCY 1 cut(s) 638
BstYI RGATCY 1 cut(s) 638
BsuRI GGCC 3 cut(s) 573, 954, 990
BtgZI GCGATG 1 cut(s) 276
BtrI CACGTC 1 cut(s) 6
BtsIMutI CAGTG 2 cut(s) 412, 715
BveI ACCTGC 2 cut(s) 970, 1066
Cac8I GCNNGC 3 cut(s) 460, 888, 924
Cfr13I GGNCC 2 cut(s) 215, 705
CseI GACGC 1 cut(s) 185
CsiI ACCWGGT 1 cut(s) 808
Csp6I GTAC 3 cut(s) 104, 664, 798
CviAII CATG 7 cut(s) 86, 128, 285, 299, 320, 454, 502
CviQI GTAC 3 cut(s) 104, 664, 798
DdeI CTNAG 2 cut(s) 153, 527
DpnI GATC 6 cut(s) 168, 255, 640, 691, 846, 1044
DpnII GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
DrdI GACNNNNNNGTC 1 cut(s) 280
DseDI GACNNNNNNGTC 1 cut(s) 280
Eam1104I CTCTTC 2 cut(s) 192, 1251
EarI CTCTTC 2 cut(s) 192, 1251
Eco130I CCWWGG 1 cut(s) 1214
Eco24I GRGCYC 1 cut(s) 357
Eco31I GGTCTC 1 cut(s) 300
Eco47I GGWCC 2 cut(s) 215, 705
EcoRII CCWGG 5 cut(s) 808, 877, 913, 949, 985
EcoT14I CCWWGG 1 cut(s) 1214
EcoT38I GRGCYC 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 1214
FaeI CATG 7 cut(s) 89, 131, 288, 302, 323, 457, 505
FatI CATG 7 cut(s) 85, 127, 284, 298, 319, 453, 501
FauI CCCGC 2 cut(s) 46, 871
FauNDI CATATG 1 cut(s) 421
FbaI TGATCA 1 cut(s) 844
FriOI GRGCYC 1 cut(s) 357
FspBI CTAG 1 cut(s) 62
GsaI CCCAGC 1 cut(s) 354
GsuI CTGGAG 3 cut(s) 297, 567, 1295
HaeIII GGCC 3 cut(s) 573, 954, 990
HgaI GACGC 1 cut(s) 185
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 7 cut(s) 89, 131, 288, 302, 323, 457, 505
HincII GTYRAC 1 cut(s) 815
HindII GTYRAC 1 cut(s) 815
HindIII AAGCTT 1 cut(s) 745
HinfI GANTC 3 cut(s) 26, 266, 1160
HphI GGTGA 1 cut(s) 422
Hpy166II GTNNAC 3 cut(s) 218, 273, 815
Hpy188I TCNGA 3 cut(s) 528, 849, 1135
Hpy188III TCNNGA 6 cut(s) 80, 191, 546, 577, 1046, 1166
Hpy8I GTNNAC 3 cut(s) 218, 273, 815
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 2 cut(s) 1036, 1106
HpyCH4III ACNGT 2 cut(s) 119, 215
HpyCH4IV ACGT 2 cut(s) 5, 106
HpyCH4V TGCA 7 cut(s) 440, 462, 670, 741, 1157, 1196, 1265
HpyF3I CTNAG 2 cut(s) 153, 527
HpySE526I ACGT 2 cut(s) 5, 106
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 7 cut(s) 89, 131, 288, 302, 323, 457, 505
Ksp22I TGATCA 1 cut(s) 844
Kzo9I GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
LguI GCTCTTC 1 cut(s) 192
LmnI GCTCC 2 cut(s) 360, 548
LweI GCATC 2 cut(s) 794, 1196
MabI ACCWGGT 1 cut(s) 808
MaeI CTAG 1 cut(s) 62
MaeII ACGT 2 cut(s) 5, 106
MaeIII GTNAC 1 cut(s) 301
MalI GATC 6 cut(s) 168, 255, 640, 691, 846, 1044
MbiI CCGCTC 1 cut(s) 620
MboI GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
MboII GAAGA 4 cut(s) 179, 503, 1093, 1268
MflI RGATCY 1 cut(s) 638
MhlI GDGCHC 1 cut(s) 357
MluCI AATT 8 cut(s) 32, 47, 391, 414, 463, 580, 610, 1140
MmeI TCCRAC 1 cut(s) 215
MnlI CCTC 5 cut(s) 148, 584, 653, 1084, 1194
MseI TTAA 4 cut(s) 210, 390, 521, 584
MspA1I CMGCKG 2 cut(s) 152, 226
MspR9I CCNGG 5 cut(s) 810, 879, 915, 951, 987
MvaI CCWGG 5 cut(s) 810, 879, 915, 951, 987
NdeI CATATG 1 cut(s) 421
NdeII GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
NlaIII CATG 7 cut(s) 89, 131, 288, 302, 323, 457, 505
NlaIV GGNNCC 3 cut(s) 356, 550, 640
PciSI GCTCTTC 1 cut(s) 192
PcsI WCGNNNNNNNCGW 1 cut(s) 11
PfeI GAWTC 3 cut(s) 26, 266, 1160
Ppu21I YACGTR 1 cut(s) 107
PshBI ATTAAT 1 cut(s) 390
Psp6I CCWGG 5 cut(s) 808, 877, 913, 949, 985
PspFI CCCAGC 1 cut(s) 350
PspGI CCWGG 5 cut(s) 808, 877, 913, 949, 985
PspN4I GGNNCC 3 cut(s) 356, 550, 640
PspPI GGNCC 2 cut(s) 215, 705
PstI CTGCAG 1 cut(s) 1159
PsuI RGATCY 1 cut(s) 638
PvuII CAGCTG 1 cut(s) 226
RsaI GTAC 3 cut(s) 105, 665, 799
RsaNI GTAC 3 cut(s) 104, 664, 798
SapI GCTCTTC 1 cut(s) 192
SaqAI TTAA 4 cut(s) 210, 390, 521, 584
Sau3AI GATC 6 cut(s) 166, 253, 638, 689, 844, 1042
Sau96I GGNCC 2 cut(s) 215, 705
ScrFI CCNGG 5 cut(s) 810, 879, 915, 951, 987
SduI GDGCHC 1 cut(s) 357
SexAI ACCWGGT 1 cut(s) 808
SfaNI GCATC 2 cut(s) 794, 1196
SfcI CTRYAG 1 cut(s) 1155
SinI GGWCC 2 cut(s) 215, 705
SmlI CTYRAG 1 cut(s) 575
SmoI CTYRAG 1 cut(s) 575
Sse9I AATT 8 cut(s) 32, 47, 391, 414, 463, 580, 610, 1140
SsiI CCGC 9 cut(s) 53, 132, 150, 249, 431, 485, 618, 820, 864
SspI AATATT 1 cut(s) 1107
SspMI CTAG 1 cut(s) 62
StyD4I CCNGG 5 cut(s) 808, 877, 913, 949, 985
StyI CCWWGG 1 cut(s) 1214
TaaI ACNGT 2 cut(s) 119, 215
TaiI ACGT 2 cut(s) 8, 109
TaqI TCGA 2 cut(s) 14, 174
TaqII GACCGA 1 cut(s) 693
TasI AATT 8 cut(s) 32, 47, 391, 414, 463, 580, 610, 1140
TatI WGTACW 2 cut(s) 663, 797
TauI GCSGC 1 cut(s) 252
TfiI GAWTC 3 cut(s) 26, 266, 1160
Tru1I TTAA 4 cut(s) 210, 390, 521, 584
Tru9I TTAA 4 cut(s) 210, 390, 521, 584
TscAI CASTG 2 cut(s) 412, 715
TspDTI ATGAA 9 cut(s) 26, 116, 279, 308, 518, 1018, 1222, 1263, 1305
TspGWI ACGGA 1 cut(s) 1102
TspRI CASTG 2 cut(s) 412, 715
VpaK11BI GGWCC 2 cut(s) 215, 705
VspI ATTAAT 1 cut(s) 390
XapI RAATTY 2 cut(s) 414, 580
XspI CTAG 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.