RLG00000029770

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
48859184 .. 48860020
837 bp
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UTR
Exon/CDS
Intron
RLM00000029770

Sequence Viewer

Length: 522 bp
ATGGCATTTTCACTTTTCAGCTATCTGTATTCCACATTGTCGCCTCCAGTAGCTCATGGAAACTTGAAGAGTGACAATATCTTACTTGATGAAGAACTTGCTCCTCATATCTGTGACTGCGAACTTGCTATTTTGAGGCCACTTACAAGCAATAGTCTTAAACTGAAGAAACAGGCTTCAGAAAATGTTGTTGGTGACACTGGCTACATTGCACCTGAGCATGTCTTACCAGGGTTTGATAAGACAAAGAGTGACATATATGACTTCAGAGTGCTGTTGTCGGAGCTCTTAACAGGAAGGAAACCTTCCGATAGTTCAAGACTAAGGGAAGAGCAATCACTAGTGAAATGGGCTTCAAAGACAGAGAGTCTGGCTGAGATGATCGATCCAGGCATTAAAAAGGCATCTTCCTCCAAGGCTTTCTCAAATTTTGCTGACATTATCTCCCTCTGTACACAGGTAAACCACAGCTTAACTTCTGTGTGGCAACATGTAAATTCTTTGATGAGTAGTTCTTACTAG

Protein Analysis

174

Amino Acids

19.12

Weight (kDa)

5.93

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 7 - 156 8.5e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 155 2.6e-09 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 380
AcsI RAATTY 2 cut(s) 427, 496
AcuI CTGAAG 3 cut(s) 162, 185, 250
AfaI GTAC 1 cut(s) 454
AflIII ACRYGT 1 cut(s) 490
AgsI TTSAA 3 cut(s) 67, 318, 357
AhdI GACNNNNNGTC 1 cut(s) 366
AhlI ACTAGT 1 cut(s) 340
AjnI CCWGG 2 cut(s) 229, 388
AjuI GAANNNNNNNTTGG 2 cut(s) 174, 206
AluBI AGCT 4 cut(s) 21, 53, 286, 471
AluI AGCT 4 cut(s) 21, 53, 286, 471
Alw21I GWGCWC 1 cut(s) 288
AlwI GGATC 1 cut(s) 380
AoxI GGCC 1 cut(s) 137
ApoI RAATTY 2 cut(s) 427, 496
AsuHPI GGTGA 1 cut(s) 206
BanII GRGCYC 1 cut(s) 288
Bbv12I GWGCWC 1 cut(s) 288
BciT130I CCWGG 2 cut(s) 231, 390
BcuI ACTAGT 1 cut(s) 340
BfaI CTAG 2 cut(s) 341, 520
Bme1390I CCNGG 2 cut(s) 231, 390
BmeRI GACNNNNNGTC 1 cut(s) 366
BmrFI CCNGG 2 cut(s) 231, 390
BmsI GCATC 1 cut(s) 413
BpmI CTGGAG 1 cut(s) 30
Bpu10I CCTNAGC 1 cut(s) 216
Bsa29I ATCGAT 1 cut(s) 384
BsaJI CCNNGG 2 cut(s) 230, 414
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bse1I ACTGG 2 cut(s) 47, 205
Bse3DI GCAATG 1 cut(s) 207
BseBI CCWGG 2 cut(s) 231, 390
BseCI ATCGAT 1 cut(s) 384
BseDI CCNNGG 2 cut(s) 230, 414
BseMI GCAATG 1 cut(s) 207
BseMII CTCAG 2 cut(s) 207, 366
BseNI ACTGG 2 cut(s) 47, 205
BseRI GAGGAG 1 cut(s) 93
BshFI GGCC 1 cut(s) 139
BshVI ATCGAT 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 288
BsnI GGCC 1 cut(s) 139
Bsp1286I GDGCHC 1 cut(s) 288
Bsp1407I TGTACA 1 cut(s) 452
Bsp143I GATC 2 cut(s) 381, 385
BspANI GGCC 1 cut(s) 139
BspCNI CTCAG 2 cut(s) 208, 367
BspDI ATCGAT 1 cut(s) 384
BspPI GGATC 1 cut(s) 380
BspQI GCTCTTC 1 cut(s) 324
BsrDI GCAATG 1 cut(s) 207
BsrGI TGTACA 1 cut(s) 452
BsrI ACTGG 2 cut(s) 47, 205
BssECI CCNNGG 2 cut(s) 230, 414
BssMI GATC 2 cut(s) 381, 385
BssT1I CCWWGG 1 cut(s) 414
Bst2UI CCWGG 2 cut(s) 231, 390
Bst6I CTCTTC 2 cut(s) 62, 324
BstAUI TGTACA 1 cut(s) 452
BstDEI CTNAG 3 cut(s) 216, 323, 375
BstKTI GATC 2 cut(s) 384, 388
BstMBI GATC 2 cut(s) 381, 385
BstNI CCWGG 2 cut(s) 231, 390
BstNSI RCATGY 2 cut(s) 224, 494
BstSCI CCNGG 2 cut(s) 229, 388
Bsu15I ATCGAT 1 cut(s) 384
BsuRI GGCC 1 cut(s) 139
BsuTUI ATCGAT 1 cut(s) 384
BtsIMutI CAGTG 1 cut(s) 198
ClaI ATCGAT 1 cut(s) 384
Csp6I GTAC 1 cut(s) 453
CviAII CATG 3 cut(s) 56, 221, 491
CviQI GTAC 1 cut(s) 453
DdeI CTNAG 3 cut(s) 216, 323, 375
DpnI GATC 2 cut(s) 383, 387
DpnII GATC 2 cut(s) 381, 385
DriI GACNNNNNGTC 1 cut(s) 366
Eam1104I CTCTTC 2 cut(s) 62, 324
Eam1105I GACNNNNNGTC 1 cut(s) 366
EarI CTCTTC 2 cut(s) 62, 324
Ecl136II GAGCTC 1 cut(s) 286
Eco130I CCWWGG 1 cut(s) 414
Eco24I GRGCYC 1 cut(s) 288
Eco53kI GAGCTC 1 cut(s) 286
Eco57I CTGAAG 3 cut(s) 162, 185, 250
EcoICRI GAGCTC 1 cut(s) 286
EcoRII CCWGG 2 cut(s) 229, 388
EcoT14I CCWWGG 1 cut(s) 414
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 1 cut(s) 414
FaeI CATG 3 cut(s) 59, 224, 494
FaiI YATR 7 cut(s) 57, 108, 222, 257, 259, 261, 492
FalI AAGNNNNNCTT 2 cut(s) 289, 321
FatI CATG 3 cut(s) 55, 220, 490
FriOI GRGCYC 1 cut(s) 288
FspBI CTAG 2 cut(s) 341, 520
GsuI CTGGAG 1 cut(s) 30
HaeIII GGCC 1 cut(s) 139
Hin1II CATG 3 cut(s) 59, 224, 494
HinfI GANTC 1 cut(s) 367
HphI GGTGA 1 cut(s) 206
Hpy166II GTNNAC 2 cut(s) 455, 463
Hpy188I TCNGA 4 cut(s) 181, 269, 283, 310
Hpy188III TCNNGA 1 cut(s) 318
Hpy8I GTNNAC 2 cut(s) 455, 463
HpyAV CCTTC 2 cut(s) 291, 315
HpyCH4V TGCA 1 cut(s) 212
HpyF3I CTNAG 3 cut(s) 216, 323, 375
Hsp92II CATG 3 cut(s) 59, 224, 494
Kzo9I GATC 2 cut(s) 381, 385
LguI GCTCTTC 1 cut(s) 324
LmnI GCTCC 2 cut(s) 106, 283
LweI GCATC 1 cut(s) 413
MaeI CTAG 2 cut(s) 341, 520
MaeIII GTNAC 4 cut(s) 71, 113, 194, 251
MalI GATC 2 cut(s) 383, 387
MboI GATC 2 cut(s) 381, 385
MboII GAAGA 5 cut(s) 79, 104, 178, 341, 399
MhlI GDGCHC 1 cut(s) 288
MluCI AATT 2 cut(s) 427, 496
MlyI GAGTC 1 cut(s) 376
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 5 cut(s) 54, 114, 129, 421, 458
MseI TTAA 4 cut(s) 159, 290, 396, 473
MslI CAYNNNNRTG 1 cut(s) 111
MspR9I CCNGG 2 cut(s) 231, 390
MvaI CCWGG 2 cut(s) 231, 390
NdeII GATC 2 cut(s) 381, 385
NlaIII CATG 3 cut(s) 59, 224, 494
NmuCI GTSAC 4 cut(s) 71, 113, 194, 251
NspI RCATGY 2 cut(s) 224, 494
PciI ACATGT 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 324
PleI GAGTC 1 cut(s) 375
PpsI GAGTC 1 cut(s) 375
PscI ACATGT 1 cut(s) 490
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 2 cut(s) 229, 388
PspGI CCWGG 2 cut(s) 229, 388
RsaI GTAC 1 cut(s) 454
RsaNI GTAC 1 cut(s) 453
RseI CAYNNNNRTG 1 cut(s) 111
SacI GAGCTC 1 cut(s) 288
SapI GCTCTTC 1 cut(s) 324
SaqAI TTAA 4 cut(s) 159, 290, 396, 473
Sau3AI GATC 2 cut(s) 381, 385
SchI GAGTC 1 cut(s) 376
ScrFI CCNGG 2 cut(s) 231, 390
SduI GDGCHC 1 cut(s) 288
SetI ASST 7 cut(s) 23, 55, 217, 288, 307, 462, 473
SfaNI GCATC 1 cut(s) 413
SmiMI CAYNNNNRTG 1 cut(s) 111
SpeI ACTAGT 1 cut(s) 340
Sse9I AATT 2 cut(s) 427, 496
SspMI CTAG 2 cut(s) 341, 520
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 2 cut(s) 229, 388
StyI CCWWGG 1 cut(s) 414
TaqI TCGA 1 cut(s) 384
TasI AATT 2 cut(s) 427, 496
TatI WGTACW 1 cut(s) 452
Tru1I TTAA 4 cut(s) 159, 290, 396, 473
Tru9I TTAA 4 cut(s) 159, 290, 396, 473
TscAI CASTG 1 cut(s) 205
TseFI GTSAC 4 cut(s) 71, 113, 194, 251
Tsp45I GTSAC 4 cut(s) 71, 113, 194, 251
TspDTI ATGAA 1 cut(s) 105
TspRI CASTG 1 cut(s) 205
XapI RAATTY 2 cut(s) 427, 496
XceI RCATGY 2 cut(s) 224, 494
XspI CTAG 2 cut(s) 341, 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.