Rorug03G0181200

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
15537177 .. 15537471
295 bp
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UTR
Exon/CDS
Intron
Rorug03G0181200.1

Sequence Viewer

Length: 177 bp
ATGTTTTTTAAGCCTGGGGAGAAGTTTATGGAGATCGTGGGGAGTCTGTACTACATGGCACCGAAGGTTTTGAAGAGGAATTATGGACCGGAGGTTGATATATGGAGTGCCGGAGTCATTCTATTCATTTTGTTATGTGGGGTTCCTCAATTTTGGGCAGGTATTTCAGAAATCTAG

Protein Analysis

58

Amino Acids

6.6

Weight (kDa)

6.07

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 53 9.4e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 149
AccB1I GGYRCC 1 cut(s) 58
AfaI GTAC 1 cut(s) 50
AgsI TTSAA 1 cut(s) 73
AjnI CCWGG 1 cut(s) 13
AspS9I GGNCC 1 cut(s) 86
AvaII GGWCC 1 cut(s) 86
BanI GGYRCC 1 cut(s) 58
BciT130I CCWGG 1 cut(s) 15
BfaI CTAG 1 cut(s) 175
BfuAI ACCTGC 1 cut(s) 149
Bme1390I CCNGG 1 cut(s) 15
Bme18I GGWCC 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 86
BmiI GGNNCC 2 cut(s) 60, 144
BmrFI CCNGG 1 cut(s) 15
BsaJI CCNNGG 1 cut(s) 14
BsaWI WCCGGW 1 cut(s) 88
BseBI CCWGG 1 cut(s) 15
BseDI CCNNGG 1 cut(s) 14
BshNI GGYRCC 1 cut(s) 58
BsiSI CCGG 2 cut(s) 89, 111
Bsp143I GATC 1 cut(s) 33
BspLI GGNNCC 2 cut(s) 60, 144
BspMI ACCTGC 1 cut(s) 149
BspT107I GGYRCC 1 cut(s) 58
BssECI CCNNGG 1 cut(s) 14
BssMI GATC 1 cut(s) 33
Bst2UI CCWGG 1 cut(s) 15
Bst6I CTCTTC 1 cut(s) 68
BstKTI GATC 1 cut(s) 36
BstMBI GATC 1 cut(s) 33
BstNI CCWGG 1 cut(s) 15
BstSCI CCNGG 1 cut(s) 13
BveI ACCTGC 1 cut(s) 149
Cfr13I GGNCC 1 cut(s) 86
Csp6I GTAC 1 cut(s) 49
CviAII CATG 1 cut(s) 55
CviJI RGCY 1 cut(s) 13
CviKI_1 RGCY 1 cut(s) 13
CviQI GTAC 1 cut(s) 49
DpnI GATC 1 cut(s) 35
DpnII GATC 1 cut(s) 33
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco47I GGWCC 1 cut(s) 86
EcoRII CCWGG 1 cut(s) 13
FaeI CATG 1 cut(s) 58
FaiI YATR 6 cut(s) 29, 56, 84, 101, 103, 136
FatI CATG 1 cut(s) 54
FspBI CTAG 1 cut(s) 175
HapII CCGG 2 cut(s) 89, 111
Hin1II CATG 1 cut(s) 58
HinfI GANTC 2 cut(s) 43, 114
HpaII CCGG 2 cut(s) 89, 111
Hpy188I TCNGA 1 cut(s) 169
HpyAV CCTTC 1 cut(s) 58
Hsp92II CATG 1 cut(s) 58
Kzo9I GATC 1 cut(s) 33
LpnPI CCDG 4 cut(s) 27, 102, 124, 144
MaeI CTAG 1 cut(s) 175
MalI GATC 1 cut(s) 35
MboI GATC 1 cut(s) 33
MboII GAAGA 1 cut(s) 85
MluCI AATT 2 cut(s) 79, 149
MlyI GAGTC 2 cut(s) 52, 123
MnlI CCTC 3 cut(s) 69, 85, 156
MseI TTAA 1 cut(s) 9
MspI CCGG 2 cut(s) 89, 111
MspR9I CCNGG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 15
NdeII GATC 1 cut(s) 33
NlaIII CATG 1 cut(s) 58
NlaIV GGNNCC 2 cut(s) 60, 144
PleI GAGTC 2 cut(s) 51, 122
PpsI GAGTC 2 cut(s) 51, 122
Psp6I CCWGG 1 cut(s) 13
PspGI CCWGG 1 cut(s) 13
PspN4I GGNNCC 2 cut(s) 60, 144
PspPI GGNCC 1 cut(s) 86
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
SaqAI TTAA 1 cut(s) 9
Sau3AI GATC 1 cut(s) 33
Sau96I GGNCC 1 cut(s) 86
SchI GAGTC 2 cut(s) 52, 123
ScrFI CCNGG 1 cut(s) 15
SetI ASST 3 cut(s) 69, 96, 163
SgeI CNNG 7 cut(s) 26, 27, 49, 67, 101, 123, 171
SinI GGWCC 1 cut(s) 86
Sse9I AATT 2 cut(s) 79, 149
SspMI CTAG 1 cut(s) 175
StyD4I CCNGG 1 cut(s) 13
TasI AATT 2 cut(s) 79, 149
TatI WGTACW 1 cut(s) 48
Tru1I TTAA 1 cut(s) 9
Tru9I TTAA 1 cut(s) 9
TspDTI ATGAA 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 86
XspI CTAG 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.