RLG00000029771

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
48860113 .. 48860573
461 bp
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UTR
Exon/CDS
Intron
RLM00000029771

Sequence Viewer

Length: 360 bp
ATGGCAGAGCTTCAGTCAGCTACGAACAGCTTTGCGGAAGAAAAGTTGCTGGGCCAAGGATCTCTTGCTTCTATTTACAAAGCCGAGTTTCCTGATGGCCAAATTTTGGCTGTAAAGAACATCAAGATGTCCGGACTCTCTTTCCATGAAGAAGAACAATTCCTGGACGTCATTTCCACTGTTTCTCAATTGAAGCACCCGAACATTGTACCACTTGTTGGCTATTGTGTGGAGCGTGGACAACATCTTCTTGTGTATGAATATGTTGGAAATTTATCCCTTGATGAGGCACTTCACAGTGATGCATACAAGCCTCTGTCCTGGGGCCTCCATCTCCAAATTGCTCTTGGTGTTGCTTAA

Protein Analysis

120

Amino Acids

13.07

Weight (kDa)

5.03

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 100 1.1e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 14 - 118 1.1e-12 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
AccB7I CCANNNNNTGG 2 cut(s) 106, 218
AccIII TCCGGA 1 cut(s) 131
AciI CCGC 1 cut(s) 35
AclWI GGATC 1 cut(s) 67
AcoI YGGCCR 1 cut(s) 97
AcsI RAATTY 2 cut(s) 102, 271
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 1 cut(s) 210
AfiI CCNNNNNNNGG 3 cut(s) 106, 218, 286
AgsI TTSAA 1 cut(s) 193
AjnI CCWGG 2 cut(s) 162, 320
AluBI AGCT 3 cut(s) 10, 20, 30
AluI AGCT 3 cut(s) 10, 20, 30
AlwI GGATC 1 cut(s) 67
Aor13HI TCCGGA 1 cut(s) 131
AoxI GGCC 3 cut(s) 52, 97, 325
ApoI RAATTY 2 cut(s) 102, 271
AspS9I GGNCC 2 cut(s) 52, 325
BalI TGGCCA 1 cut(s) 99
BccI CCATC 2 cut(s) 89, 339
BciT130I CCWGG 2 cut(s) 164, 322
Bme1390I CCNGG 2 cut(s) 164, 322
BmgT120I GGNCC 2 cut(s) 52, 325
BmiI GGNNCC 1 cut(s) 326
BmrFI CCNGG 2 cut(s) 164, 322
BmsI GCATC 1 cut(s) 292
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 2 cut(s) 55, 321
BsaWI WCCGGW 1 cut(s) 131
Bsc4I CCNNNNNNNGG 3 cut(s) 106, 218, 286
BseAI TCCGGA 1 cut(s) 131
BseBI CCWGG 2 cut(s) 164, 322
BseDI CCNNGG 2 cut(s) 55, 321
BseLI CCNNNNNNNGG 3 cut(s) 106, 218, 286
BseYI CCCAGC 1 cut(s) 49
BshFI GGCC 3 cut(s) 54, 99, 327
BsiSI CCGG 1 cut(s) 132
BslI CCNNNNNNNGG 3 cut(s) 106, 218, 286
BsnI GGCC 3 cut(s) 54, 99, 327
Bsp13I TCCGGA 1 cut(s) 131
Bsp143I GATC 1 cut(s) 59
BspACI CCGC 1 cut(s) 35
BspANI GGCC 3 cut(s) 54, 99, 327
BspEI TCCGGA 1 cut(s) 131
BspLI GGNNCC 1 cut(s) 326
BspPI GGATC 1 cut(s) 67
BssECI CCNNGG 2 cut(s) 55, 321
BssMI GATC 1 cut(s) 59
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 55
Bst2UI CCWGG 2 cut(s) 164, 322
Bst4CI ACNGT 2 cut(s) 181, 299
BstACI GRCGYC 1 cut(s) 168
BstENI CCTNNNNNAGG 1 cut(s) 284
BstKTI GATC 1 cut(s) 62
BstMBI GATC 1 cut(s) 59
BstNI CCWGG 2 cut(s) 164, 322
BstSCI CCNGG 2 cut(s) 162, 320
BstX2I RGATCY 1 cut(s) 59
BstYI RGATCY 1 cut(s) 59
BsuRI GGCC 3 cut(s) 54, 99, 327
BtsIMutI CAGTG 2 cut(s) 177, 304
Cfr13I GGNCC 2 cut(s) 52, 325
Csp6I GTAC 1 cut(s) 209
CviAII CATG 1 cut(s) 146
CviQI GTAC 1 cut(s) 209
DpnI GATC 1 cut(s) 61
DpnII GATC 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 55
EcoNI CCTNNNNNAGG 1 cut(s) 284
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 2 cut(s) 162, 320
EcoT14I CCWWGG 1 cut(s) 55
EcoT22I ATGCAT 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 55
FaeI CATG 1 cut(s) 149
FaiI YATR 4 cut(s) 147, 258, 264, 307
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FatI CATG 1 cut(s) 145
GsaI CCCAGC 1 cut(s) 53
HaeIII GGCC 3 cut(s) 54, 99, 327
HapII CCGG 1 cut(s) 132
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 1 cut(s) 149
HinfI GANTC 1 cut(s) 135
HpaII CCGG 1 cut(s) 132
Hpy166II GTNNAC 1 cut(s) 239
Hpy188III TCNNGA 3 cut(s) 92, 124, 132
Hpy8I GTNNAC 1 cut(s) 239
HpyCH4III ACNGT 2 cut(s) 181, 299
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 1 cut(s) 305
HpySE526I ACGT 1 cut(s) 168
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 1 cut(s) 149
Kpn2I TCCGGA 1 cut(s) 131
Kzo9I GATC 1 cut(s) 59
LmnI GCTCC 1 cut(s) 232
LpnPI CCDG 7 cut(s) 35, 105, 145, 149, 176, 307, 334
LweI GCATC 1 cut(s) 292
MaeII ACGT 1 cut(s) 168
MalI GATC 1 cut(s) 61
MboI GATC 1 cut(s) 59
MboII GAAGA 4 cut(s) 50, 161, 164, 239
MfeI CAATTG 1 cut(s) 188
MflI RGATCY 1 cut(s) 59
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 5 cut(s) 102, 158, 188, 271, 339
MluNI TGGCCA 1 cut(s) 99
MlyI GAGTC 1 cut(s) 129
MmeI TCCRAC 1 cut(s) 247
MnlI CCTC 3 cut(s) 280, 324, 338
Mox20I TGGCCA 1 cut(s) 99
Mph1103I ATGCAT 1 cut(s) 307
MroI TCCGGA 1 cut(s) 131
MscI TGGCCA 1 cut(s) 99
MseI TTAA 1 cut(s) 358
MslI CAYNNNNRTG 2 cut(s) 125, 300
Msp20I TGGCCA 1 cut(s) 99
MspI CCGG 1 cut(s) 132
MspR9I CCNGG 2 cut(s) 164, 322
MunI CAATTG 1 cut(s) 188
MvaI CCWGG 2 cut(s) 164, 322
NdeII GATC 1 cut(s) 59
NlaIII CATG 1 cut(s) 149
NlaIV GGNNCC 1 cut(s) 326
NmeAIII GCCGAG 1 cut(s) 109
NsiI ATGCAT 1 cut(s) 307
PflMI CCANNNNNTGG 2 cut(s) 106, 218
PfoI TCCNGGA 1 cut(s) 162
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 162, 320
PspFI CCCAGC 1 cut(s) 49
PspGI CCWGG 2 cut(s) 162, 320
PspN4I GGNNCC 1 cut(s) 326
PspPI GGNCC 2 cut(s) 52, 325
PsuI RGATCY 1 cut(s) 59
RsaI GTAC 1 cut(s) 210
RsaNI GTAC 1 cut(s) 209
RseI CAYNNNNRTG 2 cut(s) 125, 300
SaqAI TTAA 1 cut(s) 358
Sau3AI GATC 1 cut(s) 59
Sau96I GGNCC 2 cut(s) 52, 325
SchI GAGTC 1 cut(s) 129
ScrFI CCNGG 2 cut(s) 164, 322
SetI ASST 4 cut(s) 12, 22, 32, 171
SfaNI GCATC 1 cut(s) 292
SmiMI CAYNNNNRTG 2 cut(s) 125, 300
Sse9I AATT 5 cut(s) 102, 158, 188, 271, 339
SsiI CCGC 1 cut(s) 35
StyD4I CCNGG 2 cut(s) 162, 320
StyI CCWWGG 1 cut(s) 55
TaaI ACNGT 2 cut(s) 181, 299
TaiI ACGT 1 cut(s) 171
TasI AATT 5 cut(s) 102, 158, 188, 271, 339
Tru1I TTAA 1 cut(s) 358
Tru9I TTAA 1 cut(s) 358
TscAI CASTG 2 cut(s) 184, 304
TspDTI ATGAA 2 cut(s) 162, 273
TspRI CASTG 2 cut(s) 184, 304
Van91I CCANNNNNTGG 2 cut(s) 106, 218
XagI CCTNNNNNAGG 1 cut(s) 284
XapI RAATTY 2 cut(s) 102, 271
XcmI CCANNNNNNNNNTGG 1 cut(s) 344
ZraI GACGTC 1 cut(s) 169
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.