RchiOBHm_Chr3g0476851

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
22822464 .. 22822991
528 bp
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UTR
Exon/CDS
Intron
PRQ44223

Sequence Viewer

Length: 444 bp
ATGTTTGGACTCTCTTTCCATAAAGAAGAACAATTCCTGGATGTCGTTTGGACTGTTTCGCGTTTGAAAATCCCAAACATTGTACCACTTGTTGGCTATTGTGTGGAGCATGGACAACATCTTCTTGTGTATGATTATGTCAAAAATTTATCCGTTGATGAGGCACTTCACAGTGATGCACACAAGCCTCTACCCTGGGGCATCCGTCTCCAAATTGTTCTTGGTATATCTCTGCAAATGTCATTTTCACTTTTTACCTATCTGCACTATAAATTGTTGTCTCCAGTTGCTCATGGCAACTTGAAGAGTGACAATATCTTACTTGATGAAAATTTTGTTCCTTGTATCTATGACTGCGGGCTTGCTATTTTGAGGCCACTGACAAGCAATAGTCTTAAACCAAGGATCTTGATTTTGAACATTCTGCCTTTGTTTATTACATAG

Protein Analysis

147

Amino Acids

16.74

Weight (kDa)

6.63

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 8 - 123 9.2e-11 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 16 - 123 8.3e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 92
AccII CGCG 1 cut(s) 61
AciI CCGC 1 cut(s) 357
AclWI GGATC 1 cut(s) 413
AcsI RAATTY 2 cut(s) 145, 331
AfaI GTAC 1 cut(s) 84
AfiI CCNNNNNNNGG 1 cut(s) 92
AgsI TTSAA 3 cut(s) 67, 304, 418
AjnI CCWGG 2 cut(s) 36, 194
Alw26I GTCTC 2 cut(s) 212, 285
AlwI GGATC 1 cut(s) 413
AoxI GGCC 1 cut(s) 374
ApoI RAATTY 2 cut(s) 145, 331
BciT130I CCWGG 2 cut(s) 38, 196
BcoDI GTCTC 2 cut(s) 212, 285
Bme1390I CCNGG 2 cut(s) 38, 196
BmrFI CCNGG 2 cut(s) 38, 196
BmsI GCATC 2 cut(s) 166, 210
BpmI CTGGAG 1 cut(s) 267
BsaJI CCNNGG 3 cut(s) 194, 195, 401
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 284
BseBI CCWGG 2 cut(s) 38, 196
BseDI CCNNGG 3 cut(s) 194, 195, 401
BseGI GGATG 2 cut(s) 46, 201
BseLI CCNNNNNNNGG 1 cut(s) 92
BseNI ACTGG 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 248
Bsh1236I CGCG 1 cut(s) 61
BshFI GGCC 1 cut(s) 376
BslI CCNNNNNNNGG 1 cut(s) 92
BsmAI GTCTC 2 cut(s) 212, 285
BsmBI CGTCTC 1 cut(s) 212
BsnI GGCC 1 cut(s) 376
Bsp143I GATC 1 cut(s) 405
BspACI CCGC 1 cut(s) 357
BspANI GGCC 1 cut(s) 376
BspFNI CGCG 1 cut(s) 61
BspPI GGATC 1 cut(s) 413
BsrI ACTGG 1 cut(s) 284
BssECI CCNNGG 3 cut(s) 194, 195, 401
BssMI GATC 1 cut(s) 405
BssT1I CCWWGG 1 cut(s) 401
Bst2UI CCWGG 2 cut(s) 38, 196
Bst4CI ACNGT 2 cut(s) 55, 173
Bst6I CTCTTC 1 cut(s) 299
BstC8I GCNNGC 2 cut(s) 359, 363
BstF5I GGATG 2 cut(s) 46, 201
BstFNI CGCG 1 cut(s) 61
BstKTI GATC 1 cut(s) 408
BstMAI GTCTC 2 cut(s) 212, 285
BstMBI GATC 1 cut(s) 405
BstNI CCWGG 2 cut(s) 38, 196
BstSCI CCNGG 2 cut(s) 36, 194
BstUI CGCG 1 cut(s) 61
BstX2I RGATCY 1 cut(s) 405
BstYI RGATCY 1 cut(s) 405
BsuRI GGCC 1 cut(s) 376
BtsCI GGATG 2 cut(s) 46, 201
BtsIMutI CAGTG 2 cut(s) 178, 377
Cac8I GCNNGC 2 cut(s) 359, 363
Csp6I GTAC 1 cut(s) 83
CviAII CATG 2 cut(s) 110, 293
CviJI RGCY 4 cut(s) 96, 187, 361, 376
CviKI_1 RGCY 4 cut(s) 96, 187, 361, 376
CviQI GTAC 1 cut(s) 83
DpnI GATC 1 cut(s) 407
DpnII GATC 1 cut(s) 405
Eam1104I CTCTTC 1 cut(s) 299
EarI CTCTTC 1 cut(s) 299
Eco130I CCWWGG 1 cut(s) 401
EcoRII CCWGG 2 cut(s) 36, 194
EcoT14I CCWWGG 1 cut(s) 401
ErhI CCWWGG 1 cut(s) 401
Esp3I CGTCTC 1 cut(s) 212
FaeI CATG 2 cut(s) 113, 296
FaiI YATR 9 cut(s) 21, 111, 132, 138, 227, 270, 294, 351, 442
FatI CATG 2 cut(s) 109, 292
FauI CCCGC 1 cut(s) 350
FokI GGATG 2 cut(s) 53, 188
GsuI CTGGAG 1 cut(s) 267
HaeIII GGCC 1 cut(s) 376
Hin1II CATG 2 cut(s) 113, 296
HinfI GANTC 1 cut(s) 9
Hpy188III TCNNGA 1 cut(s) 409
HpyCH4III ACNGT 2 cut(s) 55, 173
HpyCH4V TGCA 3 cut(s) 179, 235, 265
Hsp92II CATG 2 cut(s) 113, 296
Kzo9I GATC 1 cut(s) 405
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 5 cut(s) 23, 50, 181, 208, 297
LweI GCATC 2 cut(s) 166, 210
MaeIII GTNAC 1 cut(s) 308
MalI GATC 1 cut(s) 407
MboI GATC 1 cut(s) 405
MboII GAAGA 3 cut(s) 38, 113, 316
MflI RGATCY 1 cut(s) 405
MluCI AATT 5 cut(s) 32, 145, 213, 272, 331
MlyI GAGTC 1 cut(s) 3
MnlI CCTC 3 cut(s) 154, 198, 366
MseI TTAA 1 cut(s) 396
MslI CAYNNNNRTG 1 cut(s) 174
MspR9I CCNGG 2 cut(s) 38, 196
MvaI CCWGG 2 cut(s) 38, 196
MvnI CGCG 1 cut(s) 61
NdeII GATC 1 cut(s) 405
NlaIII CATG 2 cut(s) 113, 296
NmuCI GTSAC 1 cut(s) 308
PasI CCCWGGG 1 cut(s) 195
PflMI CCANNNNNTGG 1 cut(s) 92
PfoI TCCNGGA 1 cut(s) 36
PleI GAGTC 1 cut(s) 3
PpsI GAGTC 1 cut(s) 3
Psp6I CCWGG 2 cut(s) 36, 194
PspGI CCWGG 2 cut(s) 36, 194
PsuI RGATCY 1 cut(s) 405
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
RseI CAYNNNNRTG 1 cut(s) 174
SaqAI TTAA 1 cut(s) 396
Sau3AI GATC 1 cut(s) 405
SchI GAGTC 1 cut(s) 3
ScrFI CCNGG 2 cut(s) 38, 196
SetI ASST 1 cut(s) 260
SfaNI GCATC 2 cut(s) 166, 210
SmiMI CAYNNNNRTG 1 cut(s) 174
Sse9I AATT 5 cut(s) 32, 145, 213, 272, 331
SsiI CCGC 1 cut(s) 357
StyD4I CCNGG 2 cut(s) 36, 194
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 2 cut(s) 55, 173
TasI AATT 5 cut(s) 32, 145, 213, 272, 331
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TscAI CASTG 2 cut(s) 178, 384
TseFI GTSAC 1 cut(s) 308
Tsp45I GTSAC 1 cut(s) 308
TspDTI ATGAA 1 cut(s) 342
TspGWI ACGGA 2 cut(s) 142, 194
TspRI CASTG 2 cut(s) 178, 384
Van91I CCANNNNNTGG 1 cut(s) 92
XapI RAATTY 2 cut(s) 145, 331
XcmI CCANNNNNNNNNTGG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.