RLG00000021120

Protein STRUBBELIG-RECEPTOR FAMILY 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
72125435 .. 72128662
3228 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021120

Sequence Viewer

Length: 1170 bp
ATGGCGACGCAGTACGTGGTTTTCACAGTGCTTGTCATGGCGGTGGTTATGGCTTCTCAGGCTGAGGCTTTTACTGATCCACTTGAAGTCACAGCTCTCCAAGAGCTTTACAAGTCCCTTAACACACCGCCACAGCTGACCGGTTGGAGATTGGATGGTGGGGATCCTTGCGATGAAACATGGAATGGAGTGTCCTGTTTTGGCTCTTCTGTGATGTACCTTGAGCTTTATGGTCTAGACCTCTCTGGGTCTATTACTGCCGCGCTGTATAATCTGAAAAAATTGAAGCAACTGGATATTAGTTCCAATAGCATTGGTGGTGAACTTCCATGTGTGTTACCCCCTCATGCAACTCATATAAATATGGCACGCAACAAATTCACTGGAAATATCCCCCAGAGTTTATCTGACATGAAATATCTTGTGTATTTGAATCTAAGCCGCAATTTGTTATCTGGACCCATTGGCAATGTTTTTAATGGCCTCCAAAGTCTAAGGCAACTGGATTTGTCTTATAATAATTTTACTGGAGATGTGCGCAGTTCATTTGGATCTCTTACTAATTTCACTGGATTGTACTTGCAGAATAATCAATTCACTGCATCAGTTGTTTATCCAGTAATTGATATGAAAATCCAAGAAAACTATGGTGTCGTCCCAAACCATTTTCAGTCCATACCAAATTTGTGGATCGGGGGTAATAGTTGTGAAGTAGCGGGGAACAACTGTCCAACCTGGGATGTTCCTCTGGAGACCAAGGCAAGGGACTCAGAACAAAACACCTATCTCCCTCCAGCAACTCAGTCAAGCGTTAAGAACTCAGGACACAAGAATAAGAAGCTTGGAATATTCGTCACTATAATTGGTTGCATCGTGGCGGCAGCTGCAGCCATAGCATGCATGGCAGCCCGCCAGGATGCAAACAATGAGCCACCACCTGAGCAGCCTGCTCGGCTTCAATTTTCTCCCCCGAGGCCACCTGAGAGGCTAGAACTTGATGGAAGGTTCATTGCAAAACGGAACTACGAAATAATTGTTGCTGGTAAAGCCTATCATGCTGATACAGAAGAAAAAGTAGTGAAGAAAGCAAAGAAAGACCAAGAGCCAGAGGAACCCCCTCCACAAGTTAAACTTGACACTTTCATCGACCATGTTGAGGAAGATGACTGA

Protein Analysis

390

Amino Acids

42.82

Weight (kDa)

5.2

Isoelectric Point (pI)

49.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 66 7e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 158 - 199 3.8e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000664)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 516
Acc16I TGCGCA 1 cut(s) 539
AccII CGCG 1 cut(s) 263
AciI CCGC 7 cut(s) 41, 128, 261, 442, 716, 878, 910
AclWI GGATC 5 cut(s) 71, 158, 171, 559, 698
AcsI RAATTY 2 cut(s) 377, 682
AfaI GTAC 3 cut(s) 14, 218, 578
AfiI CCNNNNNNNGG 2 cut(s) 762, 1156
AgeI ACCGGT 1 cut(s) 140
AgsI TTSAA 4 cut(s) 86, 286, 433, 959
AjnI CCWGG 2 cut(s) 734, 912
AluBI AGCT 6 cut(s) 95, 106, 136, 226, 841, 884
AluI AGCT 6 cut(s) 95, 106, 136, 226, 841, 884
Alw26I GTCTC 1 cut(s) 746
AlwI GGATC 5 cut(s) 71, 158, 171, 559, 698
Ama87I CYCGRG 1 cut(s) 970
AoxI GGCC 2 cut(s) 481, 974
ApeKI GCWGC 5 cut(s) 881, 884, 887, 905, 943
ApoI RAATTY 2 cut(s) 377, 682
AsiGI ACCGGT 1 cut(s) 140
AspLEI GCGC 2 cut(s) 265, 540
AspS9I GGNCC 1 cut(s) 458
AsuHPI GGTGA 1 cut(s) 332
AvaI CYCGRG 1 cut(s) 970
AvaII GGWCC 1 cut(s) 458
BamHI GGATCC 1 cut(s) 163
BbvCI CCTCAGC 1 cut(s) 63
BbvI GCAGC 5 cut(s) 871, 893, 899, 917, 955
BccI CCATC 2 cut(s) 149, 992
BcgI CGANNNNNNTGC 2 cut(s) 932, 966
BciT130I CCWGG 2 cut(s) 736, 914
BcoDI GTCTC 1 cut(s) 746
BfaI CTAG 2 cut(s) 236, 989
BfmI CTRYAG 1 cut(s) 885
BglI GCCNNNNNGGC 1 cut(s) 952
BisI GCNGC 8 cut(s) 261, 442, 879, 882, 885, 888, 906, 944
BlsI GCNGC 8 cut(s) 262, 443, 880, 883, 886, 889, 907, 945
Bme1390I CCNGG 2 cut(s) 736, 914
Bme18I GGWCC 1 cut(s) 458
BmeT110I CYCGRG 1 cut(s) 970
BmgT120I GGNCC 1 cut(s) 458
BmiI GGNNCC 3 cut(s) 165, 460, 1113
BmrFI CCNGG 2 cut(s) 736, 914
BmsI GCATC 3 cut(s) 611, 879, 907
BpmI CTGGAG 3 cut(s) 549, 770, 777
Bpu10I CCTNAGC 2 cut(s) 63, 939
BpuEI CTTGAG 1 cut(s) 242
BsaAI YACGTR 1 cut(s) 16
BsaI GGTCTC 1 cut(s) 746
BsaJI CCNNGG 3 cut(s) 735, 756, 971
BsaWI WCCGGW 1 cut(s) 140
Bsc4I CCNNNNNNNGG 2 cut(s) 762, 1156
Bse118I RCCGGY 1 cut(s) 140
Bse1I ACTGG 6 cut(s) 297, 388, 507, 532, 574, 617
Bse3DI GCAATG 2 cut(s) 475, 1008
BseBI CCWGG 2 cut(s) 736, 914
BseDI CCNNGG 3 cut(s) 735, 756, 971
BseGI GGATG 3 cut(s) 160, 745, 922
BseLI CCNNNNNNNGG 2 cut(s) 762, 1156
BseMI GCAATG 2 cut(s) 475, 1008
BseMII CTCAG 7 cut(s) 54, 71, 783, 815, 834, 930, 972
BseNI ACTGG 6 cut(s) 297, 388, 507, 532, 574, 617
BseXI GCAGC 5 cut(s) 871, 893, 899, 917, 955
Bsh1236I CGCG 1 cut(s) 263
BshFI GGCC 2 cut(s) 483, 976
BshTI ACCGGT 1 cut(s) 140
BsiHKCI CYCGRG 1 cut(s) 970
BsiSI CCGG 1 cut(s) 141
BslFI GGGAC 3 cut(s) 100, 641, 779
BslI CCNNNNNNNGG 2 cut(s) 762, 1156
BsmAI GTCTC 1 cut(s) 746
BsmFI GGGAC 3 cut(s) 100, 641, 779
BsnI GGCC 2 cut(s) 483, 976
Bso31I GGTCTC 1 cut(s) 746
BsoBI CYCGRG 1 cut(s) 970
Bsp143I GATC 4 cut(s) 76, 163, 551, 690
BspACI CCGC 7 cut(s) 41, 128, 261, 442, 716, 878, 910
BspANI GGCC 2 cut(s) 483, 976
BspCNI CTCAG 7 cut(s) 55, 70, 782, 814, 833, 931, 973
BspFNI CGCG 1 cut(s) 263
BspLI GGNNCC 3 cut(s) 165, 460, 1113
BspMAI CTGCAG 1 cut(s) 889
BspPI GGATC 5 cut(s) 71, 158, 171, 559, 698
BspQI GCTCTTC 1 cut(s) 211
BspTNI GGTCTC 1 cut(s) 746
BsrDI GCAATG 2 cut(s) 475, 1008
BsrFI RCCGGY 1 cut(s) 140
BsrI ACTGG 6 cut(s) 297, 388, 507, 532, 574, 617
BssAI RCCGGY 1 cut(s) 140
BssECI CCNNGG 3 cut(s) 735, 756, 971
BssMI GATC 4 cut(s) 76, 163, 551, 690
BssT1I CCWWGG 1 cut(s) 756
Bst2UI CCWGG 2 cut(s) 736, 914
Bst4CI ACNGT 2 cut(s) 28, 728
Bst6I CTCTTC 1 cut(s) 211
BstBAI YACGTR 1 cut(s) 16
BstC8I GCNNGC 4 cut(s) 370, 898, 910, 948
BstDEI CTNAG 9 cut(s) 57, 63, 437, 494, 769, 801, 820, 939, 981
BstF5I GGATG 3 cut(s) 160, 745, 922
BstFNI CGCG 1 cut(s) 263
BstHHI GCGC 2 cut(s) 265, 540
BstKTI GATC 4 cut(s) 79, 166, 554, 693
BstMAI GTCTC 1 cut(s) 746
BstMBI GATC 4 cut(s) 76, 163, 551, 690
BstMWI GCNNNNNNNGC 8 cut(s) 59, 884, 887, 893, 902, 952, 1046, 1055
BstNI CCWGG 2 cut(s) 736, 914
BstNSI RCATGY 1 cut(s) 900
BstSCI CCNGG 2 cut(s) 734, 912
BstSFI CTRYAG 1 cut(s) 885
BstUI CGCG 1 cut(s) 263
BstV1I GCAGC 5 cut(s) 871, 893, 899, 917, 955
BstX2I RGATCY 2 cut(s) 163, 551
BstXI CCANNNNNNTGG 1 cut(s) 687
BstYI RGATCY 2 cut(s) 163, 551
BsuRI GGCC 2 cut(s) 483, 976
BtgZI GCGATG 1 cut(s) 186
BtsCI GGATG 3 cut(s) 160, 745, 922
BtsI GCAGTG 1 cut(s) 597
BtsIMutI CAGTG 4 cut(s) 33, 381, 567, 597
Cac8I GCNNGC 4 cut(s) 370, 898, 910, 948
CfoI GCGC 2 cut(s) 265, 540
Cfr10I RCCGGY 1 cut(s) 140
Cfr13I GGNCC 1 cut(s) 458
CseI GACGC 1 cut(s) 16
Csp6I GTAC 3 cut(s) 13, 217, 577
CspAI ACCGGT 1 cut(s) 140
CviAII CATG 9 cut(s) 37, 180, 330, 347, 412, 897, 901, 1055, 1151
CviQI GTAC 3 cut(s) 13, 217, 577
DdeI CTNAG 9 cut(s) 57, 63, 437, 494, 769, 801, 820, 939, 981
DpnI GATC 4 cut(s) 78, 165, 553, 692
DpnII GATC 4 cut(s) 76, 163, 551, 690
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 756
Eco31I GGTCTC 1 cut(s) 746
Eco47I GGWCC 1 cut(s) 458
Eco88I CYCGRG 1 cut(s) 970
EcoRII CCWGG 2 cut(s) 734, 912
EcoT14I CCWWGG 1 cut(s) 756
EcoT22I ATGCAT 1 cut(s) 902
ErhI CCWWGG 1 cut(s) 756
FaeI CATG 9 cut(s) 40, 183, 333, 350, 415, 900, 904, 1058, 1154
FalI AAGNNNNNCTT 2 cut(s) 1116, 1148
FaqI GGGAC 3 cut(s) 100, 641, 779
FatI CATG 9 cut(s) 36, 179, 329, 346, 411, 896, 900, 1054, 1150
FauI CCCGC 2 cut(s) 709, 917
Fnu4HI GCNGC 8 cut(s) 261, 442, 879, 882, 885, 888, 906, 944
FokI GGATG 3 cut(s) 167, 752, 929
Fsp4HI GCNGC 8 cut(s) 261, 442, 879, 882, 885, 888, 906, 944
FspBI CTAG 2 cut(s) 236, 989
FspI TGCGCA 1 cut(s) 539
GlaI GCGC 2 cut(s) 264, 539
GluI GCNGC 8 cut(s) 261, 442, 879, 882, 885, 888, 906, 944
GsuI CTGGAG 3 cut(s) 549, 770, 777
HaeIII GGCC 2 cut(s) 483, 976
HapII CCGG 1 cut(s) 141
HgaI GACGC 1 cut(s) 16
HhaI GCGC 2 cut(s) 265, 540
Hin1II CATG 9 cut(s) 40, 183, 333, 350, 415, 900, 904, 1058, 1154
Hin6I GCGC 2 cut(s) 263, 538
HinP1I GCGC 2 cut(s) 263, 538
HindIII AAGCTT 1 cut(s) 839
HinfI GANTC 2 cut(s) 433, 767
HpaII CCGG 1 cut(s) 141
HphI GGTGA 1 cut(s) 332
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 3 cut(s) 276, 409, 772
Hpy188III TCNNGA 4 cut(s) 236, 456, 749, 822
Hpy8I GTNNAC 1 cut(s) 323
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 996
HpyCH4III ACNGT 2 cut(s) 28, 728
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 8 cut(s) 350, 583, 602, 870, 887, 900, 920, 1013
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 884, 887, 893, 902, 952, 1046, 1055
HpyF3I CTNAG 9 cut(s) 57, 63, 437, 494, 769, 801, 820, 939, 981
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 9 cut(s) 40, 183, 333, 350, 415, 900, 904, 1058, 1154
HspAI GCGC 2 cut(s) 263, 538
Kzo9I GATC 4 cut(s) 76, 163, 551, 690
LguI GCTCTTC 1 cut(s) 211
Lsp1109I GCAGC 5 cut(s) 871, 893, 899, 917, 955
LweI GCATC 3 cut(s) 611, 879, 907
MaeI CTAG 2 cut(s) 236, 989
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 3 cut(s) 88, 336, 853
MalI GATC 4 cut(s) 78, 165, 553, 692
MboI GATC 4 cut(s) 76, 163, 551, 690
MboII GAAGA 3 cut(s) 198, 1079, 1093
MflI RGATCY 2 cut(s) 163, 551
MlyI GAGTC 1 cut(s) 761
MmeI TCCRAC 2 cut(s) 125, 755
Mph1103I ATGCAT 1 cut(s) 902
MseI TTAA 4 cut(s) 120, 477, 813, 1128
MslI CAYNNNNRTG 1 cut(s) 41
MspA1I CMGCKG 2 cut(s) 136, 884
MspI CCGG 1 cut(s) 141
MspR9I CCNGG 2 cut(s) 736, 914
MvaI CCWGG 2 cut(s) 736, 914
MvnI CGCG 1 cut(s) 263
MwoI GCNNNNNNNGC 8 cut(s) 59, 884, 887, 893, 902, 952, 1046, 1055
NdeII GATC 4 cut(s) 76, 163, 551, 690
NlaIII CATG 9 cut(s) 40, 183, 333, 350, 415, 900, 904, 1058, 1154
NlaIV GGNNCC 3 cut(s) 165, 460, 1113
NmeAIII GCCGAG 1 cut(s) 931
NmuCI GTSAC 2 cut(s) 88, 853
NsbI TGCGCA 1 cut(s) 539
NsiI ATGCAT 1 cut(s) 902
NspI RCATGY 1 cut(s) 900
PaeI GCATGC 1 cut(s) 900
PciSI GCTCTTC 1 cut(s) 211
PfeI GAWTC 1 cut(s) 433
PinAI ACCGGT 1 cut(s) 140
PkrI GCNGC 8 cut(s) 262, 443, 880, 883, 886, 889, 907, 945
PleI GAGTC 1 cut(s) 761
PpsI GAGTC 1 cut(s) 761
Ppu21I YACGTR 1 cut(s) 16
PsiI TTATAA 1 cut(s) 516
Psp6I CCWGG 2 cut(s) 734, 912
PspGI CCWGG 2 cut(s) 734, 912
PspN4I GGNNCC 3 cut(s) 165, 460, 1113
PspPI GGNCC 1 cut(s) 458
PstI CTGCAG 1 cut(s) 889
PsuI RGATCY 2 cut(s) 163, 551
PvuII CAGCTG 2 cut(s) 136, 884
RsaI GTAC 3 cut(s) 14, 218, 578
RsaNI GTAC 3 cut(s) 13, 217, 577
RseI CAYNNNNRTG 1 cut(s) 41
SapI GCTCTTC 1 cut(s) 211
SaqAI TTAA 4 cut(s) 120, 477, 813, 1128
SatI GCNGC 8 cut(s) 261, 442, 879, 882, 885, 888, 906, 944
Sau3AI GATC 4 cut(s) 76, 163, 551, 690
Sau96I GGNCC 1 cut(s) 458
SchI GAGTC 1 cut(s) 761
ScrFI CCNGG 2 cut(s) 736, 914
SfaNI GCATC 3 cut(s) 611, 879, 907
SfcI CTRYAG 1 cut(s) 885
SinI GGWCC 1 cut(s) 458
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
SphI GCATGC 1 cut(s) 900
SsiI CCGC 7 cut(s) 41, 128, 261, 442, 716, 878, 910
SspI AATATT 1 cut(s) 849
SspMI CTAG 2 cut(s) 236, 989
StyD4I CCNGG 2 cut(s) 734, 912
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 2 cut(s) 28, 728
TaiI ACGT 1 cut(s) 18
TaqI TCGA 1 cut(s) 1146
TatI WGTACW 1 cut(s) 576
TauI GCSGC 3 cut(s) 263, 444, 881
TfiI GAWTC 1 cut(s) 433
Tru1I TTAA 4 cut(s) 120, 477, 813, 1128
Tru9I TTAA 4 cut(s) 120, 477, 813, 1128
TscAI CASTG 4 cut(s) 33, 388, 574, 604
TseFI GTSAC 2 cut(s) 88, 853
TseI GCWGC 5 cut(s) 881, 884, 887, 905, 943
Tsp45I GTSAC 2 cut(s) 88, 853
TspDTI ATGAA 6 cut(s) 189, 428, 534, 644, 997, 1132
TspGWI ACGGA 1 cut(s) 1033
TspRI CASTG 4 cut(s) 33, 388, 574, 604
VpaK11BI GGWCC 1 cut(s) 458
XapI RAATTY 2 cut(s) 377, 682
XbaI TCTAGA 1 cut(s) 235
XceI RCATGY 1 cut(s) 900
XcmI CCANNNNNNNNNTGG 2 cut(s) 644, 898
XspI CTAG 2 cut(s) 236, 989
Zsp2I ATGCAT 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.