FvH4_7g10920

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
10224522 .. 10225055
534 bp
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UTR
Exon/CDS
Intron
FvH4_7g10920.t1

Sequence Viewer

Length: 339 bp
ATGGGTAGTATTCCTAAGATTCCGGTCATAGACTTCTCCCGCAACAGCTTAAAGGCAGGATCACGTTCATGGATTGAAGCCTGCAACAAAGTCTGCAACGCACTCGAAGACTACGGTTGCTTTGTGGCAACACTACCCGATGCAGATTGTTCAGAGATTCACAACAGCCTCTTTGGTAGCTTGGACGACCTGTTTGATTTCCCAAAAGAGATCAAGCTCCAGAACACTCATGAGCAGGGTTTCCGTGGTTACTATGCACGTACTTTGCGTCCTGAAGGCTTCGGGATTGATGATCCAACAGACGCTGAGGCTACTAATAAGTTTACCAAACTCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.53

Weight (kDa)

4.89

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 7 - 86 2.9e-08 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 40
AclWI GGATC 2 cut(s) 67, 287
AcuI CTGAAG 1 cut(s) 294
AfaI GTAC 1 cut(s) 262
AgsI TTSAA 1 cut(s) 77
AluBI AGCT 3 cut(s) 48, 180, 217
AluI AGCT 3 cut(s) 48, 180, 217
AlwI GGATC 2 cut(s) 67, 287
AlwNI CAGNNNCTG 1 cut(s) 305
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
BbsI GAAGAC 1 cut(s) 114
BbvCI CCTCAGC 1 cut(s) 306
BcgI CGANNNNNNTGC 2 cut(s) 85, 119
BfaI CTAG 1 cut(s) 337
BmsI GCATC 1 cut(s) 130
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 306
BsaAI YACGTR 1 cut(s) 260
BsaJI CCNNGG 1 cut(s) 244
BsaWI WCCGGW 1 cut(s) 22
BseDI CCNNGG 1 cut(s) 244
BseMII CTCAG 1 cut(s) 297
BsiSI CCGG 1 cut(s) 23
Bsp143I GATC 3 cut(s) 59, 210, 292
BspACI CCGC 1 cut(s) 40
BspCNI CTCAG 1 cut(s) 298
BspHI TCATGA 1 cut(s) 229
BspPI GGATC 2 cut(s) 67, 287
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 3 cut(s) 59, 210, 292
Bst4CI ACNGT 1 cut(s) 116
BstBAI YACGTR 1 cut(s) 260
BstC8I GCNNGC 1 cut(s) 82
BstDEI CTNAG 2 cut(s) 15, 306
BstDSI CCRYGG 1 cut(s) 244
BstKTI GATC 3 cut(s) 62, 213, 295
BstMBI GATC 3 cut(s) 59, 210, 292
BstV2I GAAGAC 1 cut(s) 114
BtgI CCRYGG 1 cut(s) 244
Cac8I GCNNGC 1 cut(s) 82
CaiI CAGNNNCTG 1 cut(s) 305
CciI TCATGA 1 cut(s) 229
CseI GACGC 2 cut(s) 257, 311
Csp6I GTAC 1 cut(s) 261
CviAII CATG 2 cut(s) 69, 230
CviJI RGCY 7 cut(s) 48, 80, 168, 180, 217, 279, 311
CviKI_1 RGCY 7 cut(s) 48, 80, 168, 180, 217, 279, 311
CviQI GTAC 1 cut(s) 261
DdeI CTNAG 2 cut(s) 15, 306
DpnI GATC 3 cut(s) 61, 212, 294
DpnII GATC 3 cut(s) 59, 210, 292
Eco57I CTGAAG 1 cut(s) 294
FaeI CATG 2 cut(s) 72, 233
FaiI YATR 4 cut(s) 29, 70, 231, 255
FatI CATG 2 cut(s) 68, 229
FauI CCCGC 1 cut(s) 47
FspBI CTAG 1 cut(s) 337
GsuI CTGGAG 1 cut(s) 203
HapII CCGG 1 cut(s) 23
HgaI GACGC 2 cut(s) 257, 311
Hin1II CATG 2 cut(s) 72, 233
HinfI GANTC 2 cut(s) 19, 157
HpaII CCGG 1 cut(s) 23
Hpy166II GTNNAC 1 cut(s) 324
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 4 cut(s) 220, 230, 272, 283
Hpy8I GTNNAC 1 cut(s) 324
HpyAV CCTTC 1 cut(s) 269
HpyCH4III ACNGT 1 cut(s) 116
HpyCH4IV ACGT 2 cut(s) 64, 259
HpyCH4V TGCA 4 cut(s) 84, 96, 143, 257
HpyF3I CTNAG 2 cut(s) 15, 306
HpySE526I ACGT 2 cut(s) 64, 259
Hsp92II CATG 2 cut(s) 72, 233
Kzo9I GATC 3 cut(s) 59, 210, 292
LmnI GCTCC 1 cut(s) 222
LpnPI CCDG 7 cut(s) 36, 42, 94, 203, 221, 233, 285
LweI GCATC 1 cut(s) 130
MaeI CTAG 1 cut(s) 337
MaeII ACGT 2 cut(s) 64, 259
MaeIII GTNAC 1 cut(s) 248
MalI GATC 3 cut(s) 61, 212, 294
MboI GATC 3 cut(s) 59, 210, 292
MboII GAAGA 2 cut(s) 119, 325
MmeI TCCRAC 1 cut(s) 320
MnlI CCTC 2 cut(s) 179, 301
MseI TTAA 1 cut(s) 50
MslI CAYNNNNRTG 1 cut(s) 67
MspI CCGG 1 cut(s) 23
NdeII GATC 3 cut(s) 59, 210, 292
NlaIII CATG 2 cut(s) 72, 233
PagI TCATGA 1 cut(s) 229
PcsI WCGNNNNNNNCGW 1 cut(s) 265
PfeI GAWTC 2 cut(s) 19, 157
Ppu21I YACGTR 1 cut(s) 260
PstNI CAGNNNCTG 1 cut(s) 305
RsaI GTAC 1 cut(s) 262
RsaNI GTAC 1 cut(s) 261
RseI CAYNNNNRTG 1 cut(s) 67
SaqAI TTAA 1 cut(s) 50
Sau3AI GATC 3 cut(s) 59, 210, 292
SetI ASST 6 cut(s) 50, 67, 182, 192, 219, 262
SfaNI GCATC 1 cut(s) 130
SmiMI CAYNNNNRTG 1 cut(s) 67
SsiI CCGC 1 cut(s) 40
SspMI CTAG 1 cut(s) 337
TaaI ACNGT 1 cut(s) 116
TaiI ACGT 2 cut(s) 67, 262
TaqI TCGA 1 cut(s) 105
TfiI GAWTC 2 cut(s) 19, 157
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TspDTI ATGAA 1 cut(s) 57
TspGWI ACGGA 1 cut(s) 233
XspI CTAG 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.