pycom06g02260

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
2738722 .. 2739049
328 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g02260.1

Sequence Viewer

Length: 261 bp
ATGGATATAAATGAGGTTTGGAGCAATGACAGAATACCATCTTGTAAACATAGAGTCAATTTGAAGGAAAATGAGGAAAGATACTCGTTTGGACTATTTTCATACTTGGAAGGGGTGACACGCGCACCGGACGAGCTTACCGCAGACGACCACCCCGTGAAGTATAAGCCATTGCATATGTTGGATTATGTTCAATTTTATGTGGCCAATTATCGTAACGTTGGAGTTGGGTTTTCTGTCAAGGAATATTGCGGGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

10.07

Weight (kDa)

5.5

Isoelectric Point (pI)

16.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 123
AciI CCGC 2 cut(s) 141, 252
AclI AACGTT 1 cut(s) 219
AcoI YGGCCR 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 157
AgsI TTSAA 2 cut(s) 64, 194
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
AoxI GGCC 1 cut(s) 204
AspLEI GCGC 1 cut(s) 125
AsuHPI GGTGA 1 cut(s) 127
BalI TGGCCA 1 cut(s) 206
BccI CCATC 1 cut(s) 46
BsaWI WCCGGW 1 cut(s) 127
Bse3DI GCAATG 2 cut(s) 31, 170
BseMI GCAATG 2 cut(s) 31, 170
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 1 cut(s) 206
BsiSI CCGG 1 cut(s) 128
BsnI GGCC 1 cut(s) 206
BspACI CCGC 2 cut(s) 141, 252
BspANI GGCC 1 cut(s) 206
BspFNI CGCG 1 cut(s) 123
BsrDI GCAATG 2 cut(s) 31, 170
BstFNI CGCG 1 cut(s) 123
BstHHI GCGC 1 cut(s) 125
BstUI CGCG 1 cut(s) 123
BsuRI GGCC 1 cut(s) 206
CfoI GCGC 1 cut(s) 125
CviJI RGCY 3 cut(s) 136, 169, 206
CviKI_1 RGCY 3 cut(s) 136, 169, 206
DraIII CACNNNGTG 1 cut(s) 157
EaeI YGGCCR 1 cut(s) 204
FaiI YATR 8 cut(s) 8, 51, 103, 165, 177, 179, 189, 201
FauI CCCGC 1 cut(s) 245
FauNDI CATATG 1 cut(s) 177
GlaI GCGC 1 cut(s) 124
HaeIII GGCC 1 cut(s) 206
HapII CCGG 1 cut(s) 128
HhaI GCGC 1 cut(s) 125
Hin6I GCGC 1 cut(s) 123
HinP1I GCGC 1 cut(s) 123
HinfI GANTC 1 cut(s) 54
HpaII CCGG 1 cut(s) 128
HphI GGTGA 1 cut(s) 127
Hpy166II GTNNAC 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 47
HpyAV CCTTC 2 cut(s) 58, 104
HpyCH4IV ACGT 1 cut(s) 219
HpyCH4V TGCA 1 cut(s) 175
HpySE526I ACGT 1 cut(s) 219
HspAI GCGC 1 cut(s) 123
LmnI GCTCC 1 cut(s) 21
LpnPI CCDG 1 cut(s) 141
MaeII ACGT 1 cut(s) 219
MaeIII GTNAC 2 cut(s) 115, 215
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 3 cut(s) 58, 194, 208
MluNI TGGCCA 1 cut(s) 206
MlyI GAGTC 1 cut(s) 63
MmeI TCCRAC 2 cut(s) 162, 202
MnlI CCTC 2 cut(s) 7, 67
Mox20I TGGCCA 1 cut(s) 206
MscI TGGCCA 1 cut(s) 206
Msp20I TGGCCA 1 cut(s) 206
MspI CCGG 1 cut(s) 128
MvnI CGCG 1 cut(s) 123
NdeI CATATG 1 cut(s) 177
NmuCI GTSAC 1 cut(s) 115
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PleI GAGTC 1 cut(s) 62
PpsI GAGTC 1 cut(s) 62
Psp1406I AACGTT 1 cut(s) 219
SchI GAGTC 1 cut(s) 63
SetI ASST 3 cut(s) 18, 138, 222
Sse9I AATT 3 cut(s) 58, 194, 208
SsiI CCGC 2 cut(s) 141, 252
SspI AATATT 1 cut(s) 248
TaiI ACGT 1 cut(s) 222
TasI AATT 3 cut(s) 58, 194, 208
TseFI GTSAC 1 cut(s) 115
Tsp45I GTSAC 1 cut(s) 115
TspDTI ATGAA 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.