MD06G1028400.v1.1

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
3402364 .. 3402693
330 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1028400.v1.1.491

Sequence Viewer

Length: 330 bp
ATGAGTGTCACAAGTGTTACCCAAACGGTACCCAAAATTCCAGTAGTAGATTTCTCCCAAGAGGGTTGCTTGAAGCCAGGGACAAGTTATTGGCTCTCAGTACGTGGGAATGTTTGCCACGCACTCGAAGAGTTTGGCTGTTTCATGGTAGTCCTGCCCAACAAAGTTTCCCCTGAGCTTCAGGACAGCATGTTTGGGACATTAAAAGAGCTGTTTGATTTCCCAATTGAGACTAAAGCTCAAACTCCACAGGAAAAACCTGTAACTGATGGTTATACTGTTGGATATATGTCAACAATCTGTGATAAAATTATATATGCTAATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.1

Weight (kDa)

4.99

Isoelectric Point (pI)

53.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 13 - 93 1.9e-09 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 28
AccB1I GGYRCC 1 cut(s) 28
AcsI RAATTY 1 cut(s) 36
AcuI CTGAAG 1 cut(s) 164
AfaI GTAC 2 cut(s) 30, 102
AgsI TTSAA 1 cut(s) 73
AjnI CCWGG 1 cut(s) 76
AluBI AGCT 3 cut(s) 178, 211, 239
AluI AGCT 3 cut(s) 178, 211, 239
Alw26I GTCTC 1 cut(s) 224
ApoI RAATTY 1 cut(s) 36
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
Asp718I GGTACC 1 cut(s) 28
BanI GGYRCC 1 cut(s) 28
BccI CCATC 1 cut(s) 263
BciT130I CCWGG 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 224
Bme1390I CCNGG 1 cut(s) 78
BmiI GGNNCC 1 cut(s) 30
BmrFI CCNGG 1 cut(s) 78
Bpu10I CCTNAGC 1 cut(s) 174
BsaAI YACGTR 1 cut(s) 104
BsaJI CCNNGG 1 cut(s) 77
Bse1I ACTGG 1 cut(s) 41
BseBI CCWGG 1 cut(s) 78
BseDI CCNNGG 1 cut(s) 77
BseMII CTCAG 2 cut(s) 111, 165
BseNI ACTGG 1 cut(s) 41
BshNI GGYRCC 1 cut(s) 28
BslFI GGGAC 2 cut(s) 94, 211
BsmAI GTCTC 1 cut(s) 224
BsmFI GGGAC 2 cut(s) 94, 211
BspCNI CTCAG 2 cut(s) 110, 166
BspLI GGNNCC 1 cut(s) 30
BspT107I GGYRCC 1 cut(s) 28
BsrI ACTGG 1 cut(s) 41
BssECI CCNNGG 1 cut(s) 77
Bst2UI CCWGG 1 cut(s) 78
Bst4CI ACNGT 2 cut(s) 28, 280
Bst6I CTCTTC 1 cut(s) 123
BstBAI YACGTR 1 cut(s) 104
BstDEI CTNAG 2 cut(s) 97, 174
BstMAI GTCTC 1 cut(s) 224
BstNI CCWGG 1 cut(s) 78
BstNSI RCATGY 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 76
Csp6I GTAC 2 cut(s) 29, 101
CviAII CATG 2 cut(s) 145, 190
CviJI RGCY 6 cut(s) 76, 94, 138, 178, 211, 239
CviKI_1 RGCY 6 cut(s) 76, 94, 138, 178, 211, 239
CviQI GTAC 2 cut(s) 29, 101
DdeI CTNAG 2 cut(s) 97, 174
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
Eco57I CTGAAG 1 cut(s) 164
EcoRII CCWGG 1 cut(s) 76
FaeI CATG 2 cut(s) 148, 193
FaiI YATR 8 cut(s) 146, 191, 276, 288, 290, 314, 316, 318
FaqI GGGAC 2 cut(s) 94, 211
FatI CATG 2 cut(s) 144, 189
Hin1II CATG 2 cut(s) 148, 193
HincII GTYRAC 1 cut(s) 294
HindII GTYRAC 1 cut(s) 294
Hpy166II GTNNAC 1 cut(s) 294
Hpy188III TCNNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 294
HpyCH4III ACNGT 2 cut(s) 28, 280
HpyCH4IV ACGT 1 cut(s) 103
HpyF3I CTNAG 2 cut(s) 97, 174
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 2 cut(s) 148, 193
KpnI GGTACC 1 cut(s) 32
LpnPI CCDG 8 cut(s) 54, 63, 90, 167, 167, 186, 236, 273
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 3 cut(s) 7, 16, 262
MboII GAAGA 1 cut(s) 140
MfeI CAATTG 1 cut(s) 225
MluCI AATT 3 cut(s) 36, 225, 309
MmeI TCCRAC 1 cut(s) 262
MnlI CCTC 1 cut(s) 55
MseI TTAA 1 cut(s) 203
MspR9I CCNGG 1 cut(s) 78
MunI CAATTG 1 cut(s) 225
MvaI CCWGG 1 cut(s) 78
NlaIII CATG 2 cut(s) 148, 193
NlaIV GGNNCC 1 cut(s) 30
NmuCI GTSAC 1 cut(s) 7
NspI RCATGY 1 cut(s) 193
Ppu21I YACGTR 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 76
PspGI CCWGG 1 cut(s) 76
PspN4I GGNNCC 1 cut(s) 30
RsaI GTAC 2 cut(s) 30, 102
RsaNI GTAC 2 cut(s) 29, 101
SaqAI TTAA 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 78
SetI ASST 5 cut(s) 106, 180, 213, 241, 262
Sse9I AATT 3 cut(s) 36, 225, 309
StyD4I CCNGG 1 cut(s) 76
TaaI ACNGT 2 cut(s) 28, 280
TaiI ACGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 126
TasI AATT 3 cut(s) 36, 225, 309
Tru1I TTAA 1 cut(s) 203
Tru9I TTAA 1 cut(s) 203
TseFI GTSAC 1 cut(s) 7
Tsp45I GTSAC 1 cut(s) 7
TspDTI ATGAA 1 cut(s) 133
XapI RAATTY 1 cut(s) 36
XceI RCATGY 1 cut(s) 193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.