MD15G1255100.v1.1

oxidoreductase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
21569483 .. 21570372
890 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1255100.v1.1.491

Sequence Viewer

Length: 426 bp
ATGGACGTCAAAGTGCGAGACAAAAAAGGGGCCTATTTATCTGTCAATCCTACCCATGAAGGCTTGGGGGTGCTTAATGCCACAACCACTGAAGAAATTCAGAAGTTCACTCGTCATTTTTGGCCTAATGGAAACGATCATCTTTGTGAGGGTGCACTTGTGTATGCAAAAGTGATGGAAGAACTACATCAATTTGTGAAAAGAATGGTATTTGAAAACTACGGTGTCGAGAAGTACCATGATGATCACGTTCAATCAGCTTCTTACAATCTCCGATTCAATAAATACAAAAACCCCAAGAAAACTGGAATGGACGTGGGGTTAGCCCCTCATACGGACAATAGCTTTTCCACCGTACTCCATCAAAATCAGGTCTATGGTCTGGAGAACCATAACAAAGTATCAAAATTCACCAAAATAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

142

Amino Acids

16.26

Weight (kDa)

8.58

Isoelectric Point (pI)

20.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 9
AcsI RAATTY 2 cut(s) 96, 407
AcuI CTGAAG 1 cut(s) 111
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 2 cut(s) 236, 357
AfiI CCNNNNNNNGG 1 cut(s) 334
AgsI TTSAA 3 cut(s) 215, 254, 280
AjiI CACGTC 1 cut(s) 316
AluBI AGCT 2 cut(s) 260, 345
AluI AGCT 2 cut(s) 260, 345
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 1 cut(s) 12
Alw44I GTGCAC 1 cut(s) 153
AoxI GGCC 2 cut(s) 30, 122
ApaLI GTGCAC 1 cut(s) 153
ApoI RAATTY 2 cut(s) 96, 407
Asp700I GAANNNNTTC 1 cut(s) 96
AspS9I GGNCC 1 cut(s) 30
AsuHPI GGTGA 1 cut(s) 403
BaeGI GKGCMC 1 cut(s) 157
Bbv12I GWGCWC 1 cut(s) 157
BccI CCATC 2 cut(s) 169, 369
BclI TGATCA 1 cut(s) 244
BcoDI GTCTC 1 cut(s) 12
BmgBI CACGTC 1 cut(s) 316
BmgT120I GGNCC 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 31
BpmI CTGGAG 1 cut(s) 404
BsaHI GRCGYC 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 334
Bse1I ACTGG 1 cut(s) 310
BseLI CCNNNNNNNGG 1 cut(s) 334
BseNI ACTGG 1 cut(s) 310
BseSI GKGCMC 1 cut(s) 157
BshFI GGCC 2 cut(s) 32, 124
BsiHKAI GWGCWC 1 cut(s) 157
BslI CCNNNNNNNGG 1 cut(s) 334
BsmAI GTCTC 1 cut(s) 12
BsnI GGCC 2 cut(s) 32, 124
Bsp1286I GDGCHC 1 cut(s) 157
Bsp143I GATC 2 cut(s) 136, 244
BspANI GGCC 2 cut(s) 32, 124
BspLI GGNNCC 1 cut(s) 31
BsrI ACTGG 1 cut(s) 310
BssMI GATC 2 cut(s) 136, 244
BssNI GRCGYC 1 cut(s) 6
Bst4CI ACNGT 2 cut(s) 224, 355
BstACI GRCGYC 1 cut(s) 6
BstKTI GATC 2 cut(s) 139, 247
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 2 cut(s) 136, 244
BstSLI GKGCMC 1 cut(s) 157
BsuRI GGCC 2 cut(s) 32, 124
BtrI CACGTC 1 cut(s) 316
BtsIMutI CAGTG 1 cut(s) 87
Cfr13I GGNCC 1 cut(s) 30
Csp6I GTAC 2 cut(s) 235, 356
CviAII CATG 2 cut(s) 56, 239
CviJI RGCY 6 cut(s) 32, 63, 124, 260, 326, 345
CviKI_1 RGCY 6 cut(s) 32, 63, 124, 260, 326, 345
CviQI GTAC 2 cut(s) 235, 356
DpnI GATC 2 cut(s) 138, 246
DpnII GATC 2 cut(s) 136, 244
Eco57I CTGAAG 1 cut(s) 111
EcoO109I RGGNCCY 1 cut(s) 30
FaeI CATG 2 cut(s) 59, 242
FaiI YATR 6 cut(s) 57, 165, 240, 333, 378, 393
FatI CATG 2 cut(s) 55, 238
FbaI TGATCA 1 cut(s) 244
GsuI CTGGAG 1 cut(s) 404
HaeIII GGCC 2 cut(s) 32, 124
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 2 cut(s) 59, 242
HinfI GANTC 1 cut(s) 276
HphI GGTGA 1 cut(s) 403
Hpy166II GTNNAC 2 cut(s) 108, 155
Hpy188I TCNGA 2 cut(s) 102, 275
Hpy188III TCNNGA 2 cut(s) 229, 383
Hpy8I GTNNAC 2 cut(s) 108, 155
HpyAV CCTTC 1 cut(s) 53
HpyCH4III ACNGT 2 cut(s) 224, 355
HpyCH4IV ACGT 3 cut(s) 6, 249, 315
HpyCH4V TGCA 2 cut(s) 155, 167
HpySE526I ACGT 3 cut(s) 6, 249, 315
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 2 cut(s) 59, 242
Ksp22I TGATCA 1 cut(s) 244
Kzo9I GATC 2 cut(s) 136, 244
LpnPI CCDG 3 cut(s) 291, 356, 368
MaeII ACGT 3 cut(s) 6, 249, 315
MalI GATC 2 cut(s) 138, 246
MboI GATC 2 cut(s) 136, 244
MboII GAAGA 2 cut(s) 104, 191
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 3 cut(s) 96, 191, 407
MnlI CCTC 2 cut(s) 142, 339
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 1 cut(s) 75
MslI CAYNNNNRTG 1 cut(s) 144
NdeII GATC 2 cut(s) 136, 244
NlaIII CATG 2 cut(s) 59, 242
NlaIV GGNNCC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 1 cut(s) 276
PspN4I GGNNCC 1 cut(s) 31
PspPI GGNCC 1 cut(s) 30
RsaI GTAC 2 cut(s) 236, 357
RsaNI GTAC 2 cut(s) 235, 356
RseI CAYNNNNRTG 1 cut(s) 144
SaqAI TTAA 1 cut(s) 75
Sau3AI GATC 2 cut(s) 136, 244
Sau96I GGNCC 1 cut(s) 30
SduI GDGCHC 1 cut(s) 157
SetI ASST 6 cut(s) 9, 252, 262, 318, 347, 375
SmiMI CAYNNNNRTG 1 cut(s) 144
Sse9I AATT 3 cut(s) 96, 191, 407
TaaI ACNGT 2 cut(s) 224, 355
TaiI ACGT 3 cut(s) 9, 252, 318
TaqI TCGA 1 cut(s) 228
TasI AATT 3 cut(s) 96, 191, 407
TfiI GAWTC 1 cut(s) 276
Tru1I TTAA 1 cut(s) 75
Tru9I TTAA 1 cut(s) 75
TscAI CASTG 1 cut(s) 94
TspDTI ATGAA 1 cut(s) 72
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 1 cut(s) 94
VneI GTGCAC 1 cut(s) 153
XapI RAATTY 2 cut(s) 96, 407
XmnI GAANNNNTTC 1 cut(s) 96
ZraI GACGTC 1 cut(s) 7
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.