MD09G1065000.v1.1

UDP-glycosyltransferase 83A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000438
Physical Location & Seq
Reverse (-)
4442268 .. 4443781
1514 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1065000.v1.1.491

Sequence Viewer

Length: 1023 bp
ATGAGTAGGCCACATATCGTAGCGATTCCTTACCCGGCGCAAGGGCACGTAATTCCCTTGATGGAGTTCTCGCAAAGCTTAGCGAACCATGGTATCAAGGTCAGTTTTGTGAACGCGGAGTATAACCACAAGCGCATAGTGAAAGCCTTGGCTGGCGAGAGTCTTATCGATCTAGTTTCGCTTCCAGATGGGTTAGAACCGTGGGAGGACAAGAGCGAGCTAGAGCAGATATCCGAAGCGTTGAAATGGATCATGCCGGGGAAGTTGGAGGAGCTCATAGAGAAGATCAACGGAGGGGATGGCGAAAATGTCACTTGTGTCATGGCTGATCATCATATTTTCTGGGCCCTGGAAGTAGCAGAGAAGATGAACATCAAGGCAGTTGCATTTTGGCCTGCGGCAGCTGCATCGTTGGCGTTGCTTCTCAGTGTACCAAAGTACATTGATGAAGGAATCGTTGACAACGATGTGATATATGTTGCATTTGGCAGCTTCACAGTTTTCGATCCAACCCAATTCAAAGAATTGGCTTTGGCTCTCGAATTATCCGAGAGGCCATTCCTCTGGGTCGTGAGGTCAGATACTACTGACAGTACTTGTGATCCCTACCCGGAAGGATATCTAGAGCGTGTAGCCTCTCGCGGCCTGATGGTCAGTTGGGCACCTCAACAGAAGGTCCTGGCTCATCCTTCGATTGCTTGCTTCGTAAGTCACTGCGGGTGGAACTCCACCCTTGAAGGCATAAGCAATGGAGTTCCTATATTGTGCTGGCCATACTTTGCCGATCAGTTCATCAATGAGAGCTACATTTGTGATGTTTGGAAGGCGGGACTGAAATTCGATAGGAACGAAAGCGGGCTTATCACGAAAGAAGAAATCAAGAACAAGGTGGAACAACTGCTTGGTGTTGAAGAATTTAAAGAAAGAGCTTCCAAACTTAAGGAATTTGCCCTGACCAGTATCAAAGAAGGTGGCCAATCTAACAAGAACTTTAACAATTTTATTGAATGGCTCAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

341

Amino Acids

38.11

Weight (kDa)

4.99

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 6 - 47 1.4e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 155 - 314 2.5e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 661
AccII CGCG 2 cut(s) 116, 642
AciI CCGC 6 cut(s) 116, 398, 642, 717, 827, 855
AclWI GGATC 3 cut(s) 257, 500, 596
AcoI YGGCCR 2 cut(s) 770, 973
AcsI RAATTY 3 cut(s) 836, 914, 944
AfaI GTAC 3 cut(s) 432, 440, 595
AfiI CCNNNNNNNGG 1 cut(s) 41
AflII CTTAAG 1 cut(s) 938
AgsI TTSAA 5 cut(s) 244, 520, 737, 911, 1007
AjnI CCWGG 2 cut(s) 348, 678
AjuI GAANNNNNNNTTGG 2 cut(s) 885, 917
AluBI AGCT 7 cut(s) 78, 220, 274, 404, 492, 804, 929
AluI AGCT 7 cut(s) 78, 220, 274, 404, 492, 804, 929
Alw21I GWGCWC 1 cut(s) 276
AlwI GGATC 3 cut(s) 257, 500, 596
AoxI GGCC 7 cut(s) 8, 345, 392, 554, 643, 770, 973
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 3 cut(s) 401, 404, 489
ApoI RAATTY 3 cut(s) 836, 914, 944
AspLEI GCGC 2 cut(s) 40, 135
AspS9I GGNCC 3 cut(s) 345, 346, 676
AsuC2I CCSGG 3 cut(s) 35, 258, 611
AvaII GGWCC 1 cut(s) 676
BaeGI GKGCMC 3 cut(s) 48, 349, 664
BaeI ACNNNNGTAYC 2 cut(s) 76, 109
BalI TGGCCA 2 cut(s) 772, 975
BanI GGYRCC 1 cut(s) 661
BanII GRGCYC 2 cut(s) 276, 349
Bbv12I GWGCWC 1 cut(s) 276
BbvI GCAGC 3 cut(s) 391, 413, 501
BccI CCATC 4 cut(s) 55, 182, 293, 643
BcgI CGANNNNNNTGC 2 cut(s) 390, 424
BciT130I CCWGG 2 cut(s) 350, 680
BclI TGATCA 1 cut(s) 328
BcnI CCSGG 3 cut(s) 35, 258, 611
BfaI CTAG 3 cut(s) 173, 221, 623
BfrI CTTAAG 1 cut(s) 938
BisI GCNGC 5 cut(s) 399, 402, 405, 490, 643
BlpI GCTNAGC 1 cut(s) 79
BlsI GCNGC 5 cut(s) 400, 403, 406, 491, 644
BmcAI AGTACT 1 cut(s) 595
Bme1390I CCNGG 5 cut(s) 35, 258, 350, 611, 680
Bme18I GGWCC 1 cut(s) 676
BmgT120I GGNCC 3 cut(s) 345, 346, 676
BmiI GGNNCC 2 cut(s) 347, 663
BmrFI CCNGG 5 cut(s) 35, 258, 350, 611, 680
BmsI GCATC 1 cut(s) 416
Bpu1102I GCTNAGC 1 cut(s) 79
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 3 cut(s) 35, 258, 611
Bsa29I ATCGAT 1 cut(s) 168
BsaAI YACGTR 1 cut(s) 49
BsaBI GATNNNNATC 1 cut(s) 371
BsaJI CCNNGG 5 cut(s) 88, 147, 200, 257, 348
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 957
Bse3DI GCAATG 1 cut(s) 754
Bse8I GATNNNNATC 1 cut(s) 371
BseBI CCWGG 2 cut(s) 350, 680
BseCI ATCGAT 1 cut(s) 168
BseDI CCNNGG 5 cut(s) 88, 147, 200, 257, 348
BseGI GGATG 2 cut(s) 304, 685
BseJI GATNNNNATC 1 cut(s) 371
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 1 cut(s) 439
BseNI ACTGG 1 cut(s) 957
BseRI GAGGAG 1 cut(s) 284
BseSI GKGCMC 3 cut(s) 48, 349, 664
BseXI GCAGC 3 cut(s) 391, 413, 501
Bsh1236I CGCG 2 cut(s) 116, 642
BshFI GGCC 7 cut(s) 10, 347, 394, 556, 645, 772, 975
BshNI GGYRCC 1 cut(s) 661
BshVI ATCGAT 1 cut(s) 168
BsiHKAI GWGCWC 1 cut(s) 276
BsiSI CCGG 3 cut(s) 35, 257, 611
BslFI GGGAC 1 cut(s) 843
BslI CCNNNNNNNGG 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 843
BsnI GGCC 7 cut(s) 10, 347, 394, 556, 645, 772, 975
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 4 cut(s) 48, 276, 349, 664
Bsp143I GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
Bsp1720I GCTNAGC 1 cut(s) 79
Bsp19I CCATGG 1 cut(s) 88
BspACI CCGC 6 cut(s) 116, 398, 642, 717, 827, 855
BspANI GGCC 7 cut(s) 10, 347, 394, 556, 645, 772, 975
BspCNI CTCAG 1 cut(s) 438
BspDI ATCGAT 1 cut(s) 168
BspFNI CGCG 2 cut(s) 116, 642
BspLI GGNNCC 2 cut(s) 347, 663
BspPI GGATC 3 cut(s) 257, 500, 596
BspT107I GGYRCC 1 cut(s) 661
BspTI CTTAAG 1 cut(s) 938
BsrDI GCAATG 1 cut(s) 754
BsrI ACTGG 1 cut(s) 957
BssECI CCNNGG 5 cut(s) 88, 147, 200, 257, 348
BssMI GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
BssT1I CCWWGG 2 cut(s) 88, 147
Bst2UI CCWGG 2 cut(s) 350, 680
Bst4CI ACNGT 3 cut(s) 201, 499, 593
BstAFI CTTAAG 1 cut(s) 938
BstBAI YACGTR 1 cut(s) 49
BstC8I GCNNGC 6 cut(s) 154, 218, 396, 700, 770, 857
BstDEI CTNAG 2 cut(s) 79, 425
BstDSI CCRYGG 2 cut(s) 88, 200
BstF5I GGATG 2 cut(s) 304, 685
BstFNI CGCG 2 cut(s) 116, 642
BstHHI GCGC 2 cut(s) 40, 135
BstKTI GATC 7 cut(s) 172, 252, 288, 331, 508, 604, 787
BstMBI GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
BstMWI GCNNNNNNNGC 2 cut(s) 404, 413
BstNI CCWGG 2 cut(s) 350, 680
BstSCI CCNGG 5 cut(s) 33, 256, 348, 609, 678
BstSLI GKGCMC 3 cut(s) 48, 349, 664
BstUI CGCG 2 cut(s) 116, 642
BstV1I GCAGC 3 cut(s) 391, 413, 501
BstXI CCANNNNNNTGG 1 cut(s) 564
Bsu15I ATCGAT 1 cut(s) 168
BsuRI GGCC 7 cut(s) 10, 347, 394, 556, 645, 772, 975
BsuTUI ATCGAT 1 cut(s) 168
BtgI CCRYGG 2 cut(s) 88, 200
BtsCI GGATG 2 cut(s) 304, 685
BtsI GCAGTG 1 cut(s) 712
BtsIMutI CAGTG 2 cut(s) 433, 712
Cac8I GCNNGC 6 cut(s) 154, 218, 396, 700, 770, 857
CfoI GCGC 2 cut(s) 40, 135
Cfr13I GGNCC 3 cut(s) 345, 346, 676
ClaI ATCGAT 1 cut(s) 168
Csp6I GTAC 3 cut(s) 431, 439, 594
CspCI CAANNNNNGTGG 2 cut(s) 952, 987
CviAII CATG 3 cut(s) 89, 253, 322
CviQI GTAC 3 cut(s) 431, 439, 594
DdeI CTNAG 2 cut(s) 79, 425
DpnI GATC 7 cut(s) 171, 251, 287, 330, 507, 603, 786
DpnII GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
DraI TTTAAA 1 cut(s) 919
EaeI YGGCCR 2 cut(s) 770, 973
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 2 cut(s) 88, 147
Eco24I GRGCYC 2 cut(s) 276, 349
Eco32I GATATC 2 cut(s) 231, 620
Eco47I GGWCC 1 cut(s) 676
Eco53kI GAGCTC 1 cut(s) 274
EcoICRI GAGCTC 1 cut(s) 274
EcoO109I RGGNCCY 2 cut(s) 346, 676
EcoRII CCWGG 2 cut(s) 348, 678
EcoRV GATATC 2 cut(s) 231, 620
EcoT14I CCWWGG 2 cut(s) 88, 147
EcoT38I GRGCYC 2 cut(s) 276, 349
ErhI CCWWGG 2 cut(s) 88, 147
FaeI CATG 3 cut(s) 92, 256, 325
FaqI GGGAC 1 cut(s) 843
FatI CATG 3 cut(s) 88, 252, 321
FauI CCCGC 3 cut(s) 710, 820, 848
FbaI TGATCA 1 cut(s) 328
Fnu4HI GCNGC 5 cut(s) 399, 402, 405, 490, 643
FokI GGATG 2 cut(s) 311, 672
FriOI GRGCYC 2 cut(s) 276, 349
Fsp4HI GCNGC 5 cut(s) 399, 402, 405, 490, 643
FspBI CTAG 3 cut(s) 173, 221, 623
GlaI GCGC 2 cut(s) 39, 134
GluI GCNGC 5 cut(s) 399, 402, 405, 490, 643
HaeIII GGCC 7 cut(s) 10, 347, 394, 556, 645, 772, 975
HapII CCGG 3 cut(s) 35, 257, 611
HhaI GCGC 2 cut(s) 40, 135
Hin1II CATG 3 cut(s) 92, 256, 325
Hin6I GCGC 2 cut(s) 38, 133
HinP1I GCGC 2 cut(s) 38, 133
HincII GTYRAC 1 cut(s) 460
HindII GTYRAC 1 cut(s) 460
HindIII AAGCTT 1 cut(s) 76
HinfI GANTC 3 cut(s) 25, 160, 453
HpaII CCGG 3 cut(s) 35, 257, 611
Hpy166II GTNNAC 3 cut(s) 112, 431, 460
Hpy188I TCNGA 3 cut(s) 235, 550, 580
Hpy188III TCNNGA 6 cut(s) 185, 539, 571, 623, 865, 880
Hpy8I GTNNAC 3 cut(s) 112, 431, 460
HpyAV CCTTC 7 cut(s) 443, 608, 667, 699, 731, 817, 962
HpyCH4III ACNGT 3 cut(s) 201, 499, 593
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 3 cut(s) 386, 407, 482
HpyF10VI GCNNNNNNNGC 2 cut(s) 404, 413
HpyF3I CTNAG 2 cut(s) 79, 425
HpySE526I ACGT 1 cut(s) 48
Hsp92II CATG 3 cut(s) 92, 256, 325
HspAI GCGC 2 cut(s) 38, 133
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
LmnI GCTCC 1 cut(s) 271
Lsp1109I GCAGC 3 cut(s) 391, 413, 501
LweI GCATC 1 cut(s) 416
MaeI CTAG 3 cut(s) 173, 221, 623
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 2 cut(s) 310, 710
MalI GATC 7 cut(s) 171, 251, 287, 330, 507, 603, 786
MboI GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
MboII GAAGA 4 cut(s) 295, 376, 884, 923
MhlI GDGCHC 4 cut(s) 48, 276, 349, 664
MlsI TGGCCA 2 cut(s) 772, 975
MluCI AATT 8 cut(s) 51, 515, 524, 542, 836, 914, 944, 997
MluNI TGGCCA 2 cut(s) 772, 975
MlyI GAGTC 1 cut(s) 169
MmeI TCCRAC 2 cut(s) 246, 533
MnlI CCTC 8 cut(s) 199, 262, 287, 546, 567, 572, 646, 675
Mox20I TGGCCA 2 cut(s) 772, 975
MscI TGGCCA 2 cut(s) 772, 975
MseI TTAA 3 cut(s) 918, 939, 993
Msp20I TGGCCA 2 cut(s) 772, 975
MspA1I CMGCKG 1 cut(s) 404
MspCI CTTAAG 1 cut(s) 938
MspI CCGG 3 cut(s) 35, 257, 611
MspR9I CCNGG 5 cut(s) 35, 258, 350, 611, 680
MvaI CCWGG 2 cut(s) 350, 680
MvnI CGCG 2 cut(s) 116, 642
MwoI GCNNNNNNNGC 2 cut(s) 404, 413
NciI CCSGG 3 cut(s) 35, 258, 611
NcoI CCATGG 1 cut(s) 88
NdeII GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
NlaIII CATG 3 cut(s) 92, 256, 325
NlaIV GGNNCC 2 cut(s) 347, 663
NmuCI GTSAC 2 cut(s) 310, 710
PcsI WCGNNNNNNNCGW 3 cut(s) 462, 546, 846
PfeI GAWTC 2 cut(s) 25, 453
PkrI GCNGC 5 cut(s) 400, 403, 406, 491, 644
PleI GAGTC 1 cut(s) 168
PpsI GAGTC 1 cut(s) 168
Ppu21I YACGTR 1 cut(s) 49
PpuMI RGGWCCY 1 cut(s) 676
Psp124BI GAGCTC 1 cut(s) 276
Psp5II RGGWCCY 1 cut(s) 676
Psp6I CCWGG 2 cut(s) 348, 678
PspGI CCWGG 2 cut(s) 348, 678
PspN4I GGNNCC 2 cut(s) 347, 663
PspOMI GGGCCC 1 cut(s) 345
PspPI GGNCC 3 cut(s) 345, 346, 676
PspPPI RGGWCCY 1 cut(s) 676
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 3 cut(s) 432, 440, 595
RsaNI GTAC 3 cut(s) 431, 439, 594
SacI GAGCTC 1 cut(s) 276
SaqAI TTAA 3 cut(s) 918, 939, 993
SatI GCNGC 5 cut(s) 399, 402, 405, 490, 643
Sau3AI GATC 7 cut(s) 169, 249, 285, 328, 505, 601, 784
Sau96I GGNCC 3 cut(s) 345, 346, 676
ScaI AGTACT 1 cut(s) 595
SchI GAGTC 1 cut(s) 169
ScrFI CCNGG 5 cut(s) 35, 258, 350, 611, 680
SduI GDGCHC 4 cut(s) 48, 276, 349, 664
SfaNI GCATC 1 cut(s) 416
SinI GGWCC 1 cut(s) 676
SmlI CTYRAG 2 cut(s) 938, 1013
SmoI CTYRAG 2 cut(s) 938, 1013
Sse9I AATT 8 cut(s) 51, 515, 524, 542, 836, 914, 944, 997
SsiI CCGC 6 cut(s) 116, 398, 642, 717, 827, 855
SspMI CTAG 3 cut(s) 173, 221, 623
SstI GAGCTC 1 cut(s) 276
StyD4I CCNGG 5 cut(s) 33, 256, 348, 609, 678
StyI CCWWGG 2 cut(s) 88, 147
TaaI ACNGT 3 cut(s) 201, 499, 593
TaiI ACGT 1 cut(s) 51
TaqI TCGA 5 cut(s) 168, 504, 540, 692, 840
TasI AATT 8 cut(s) 51, 515, 524, 542, 836, 914, 944, 997
TatI WGTACW 2 cut(s) 438, 593
TauI GCSGC 2 cut(s) 401, 645
TfiI GAWTC 2 cut(s) 25, 453
Tru1I TTAA 3 cut(s) 918, 939, 993
Tru9I TTAA 3 cut(s) 918, 939, 993
TscAI CASTG 2 cut(s) 433, 719
TseFI GTSAC 2 cut(s) 310, 710
TseI GCWGC 3 cut(s) 401, 404, 489
Tsp45I GTSAC 2 cut(s) 310, 710
TspDTI ATGAA 3 cut(s) 383, 462, 781
TspGWI ACGGA 1 cut(s) 306
TspRI CASTG 2 cut(s) 433, 719
Vha464I CTTAAG 1 cut(s) 938
VpaK11BI GGWCC 1 cut(s) 676
XapI RAATTY 3 cut(s) 836, 914, 944
XbaI TCTAGA 1 cut(s) 622
XspI CTAG 3 cut(s) 173, 221, 623
ZrmI AGTACT 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.