Rh2BG597100

UDP-glycosyltransferase 83A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000438
Physical Location & Seq
Forward (+)
81917990 .. 81924311
6322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG597100.1

Sequence Viewer

Length: 768 bp
ATGAGCAAGCCACATATTTTAGCTATTCCTTACCCAGCACAAGGCCATGTAATTCCCTTGATGGAGTTATCACAGTGCTTAATAAATCATGGCTTCAAAGTCACATTCGTGAATACGGATCATACTCACGAGCGAGTCATGAATGCTGTAGCTGATGAAACTCATAGAAGAGATGATCAGCTTCATCTGGTTTCAATTCCAGATGGGTTAGAACCATGGGAGGACAGGAATGAGCTGGGTCAGTTATCTGAAGCAATATACCGAGTGATGCCTGGGAAGTTGGAGGAGCTCATAGAGAAGATCAATGGAGAGGAAGGTGACAAAATAACTTGTGTCATTGCTGATTTCATTATGGGATGGGCTCTGGAAGTGGCCGAGAAAAAGAATATCAAGAGTGTTTCCTTTTTCCCTGCGGCAGCTGCAGTTCTTGCGTTGAATTTTTGTGTTCCACAGTTAATATGTGTAGGAATCATTAATAATGATGGTCTAAGCAATAGGGTTCCTTTCTTGTGTTGGCCATACTTCGCGGACCAGTTCCTTGATAAGAGTTACATTTGTAATGTTTGGAAGGTGGGATTGAAGTTTGATAAGAATGAGAATGGGATCATTCCTACAGGAGAAATTAACAAGAAGGTGGAACAACTTCTTGGCGACGAAAATTTCAGAGCTAGGGCTTCAAAACTCAAGGAAATGGCCATGACTAGGGTCAAAGAAGGTGGCCAGTCTAACAAGATATATAAGAATTTCATTGAGTGGATGAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

255

Amino Acids

28.9

Weight (kDa)

5.84

Isoelectric Point (pI)

26.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 527
AciI CCGC 2 cut(s) 413, 527
AclWI GGATC 2 cut(s) 126, 611
AcoI YGGCCR 4 cut(s) 372, 515, 693, 718
AcsI RAATTY 3 cut(s) 436, 658, 742
AcuI CTGAAG 1 cut(s) 270
AfiI CCNNNNNNNGG 2 cut(s) 41, 702
AgsI TTSAA 5 cut(s) 97, 195, 436, 580, 678
AjnI CCWGG 1 cut(s) 271
AjuI GAANNNNNNNTTGG 2 cut(s) 630, 662
AleI CACNNNNGTG 1 cut(s) 107
AluBI AGCT 7 cut(s) 23, 152, 181, 235, 289, 419, 668
AluI AGCT 7 cut(s) 23, 152, 181, 235, 289, 419, 668
Alw21I GWGCWC 1 cut(s) 291
AlwI GGATC 2 cut(s) 126, 611
AoxI GGCC 5 cut(s) 43, 372, 515, 693, 718
ApeKI GCWGC 2 cut(s) 416, 419
ApoI RAATTY 3 cut(s) 436, 658, 742
AseI ATTAAT 1 cut(s) 474
Asp700I GAANNNNTTC 1 cut(s) 642
AspS9I GGNCC 1 cut(s) 529
AsuHPI GGTGA 1 cut(s) 329
AvaII GGWCC 1 cut(s) 529
BalI TGGCCA 3 cut(s) 517, 695, 720
BanII GRGCYC 2 cut(s) 291, 364
BauI CACGAG 1 cut(s) 128
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 2 cut(s) 406, 428
BccI CCATC 4 cut(s) 55, 197, 351, 476
BciT130I CCWGG 1 cut(s) 273
BclI TGATCA 1 cut(s) 175
BfaI CTAG 2 cut(s) 669, 702
BfmI CTRYAG 3 cut(s) 147, 420, 612
BisI GCNGC 3 cut(s) 414, 417, 420
BlsI GCNGC 3 cut(s) 415, 418, 421
Bme1390I CCNGG 1 cut(s) 273
Bme18I GGWCC 1 cut(s) 529
BmgT120I GGNCC 1 cut(s) 529
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 1 cut(s) 273
BmsI GCATC 1 cut(s) 258
BoxI GACNNNNGTC 1 cut(s) 704
BpuEI CTTGAG 1 cut(s) 668
BsaJI CCNNGG 2 cut(s) 215, 272
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 702
Bse1I ACTGG 2 cut(s) 532, 721
Bse3DI GCAATG 1 cut(s) 336
BseBI CCWGG 1 cut(s) 273
BseDI CCNNGG 2 cut(s) 215, 272
BseGI GGATG 2 cut(s) 362, 762
BseLI CCNNNNNNNGG 2 cut(s) 41, 702
BseMI GCAATG 1 cut(s) 336
BseNI ACTGG 2 cut(s) 532, 721
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 2 cut(s) 406, 428
BseYI CCCAGC 2 cut(s) 34, 235
Bsh1236I CGCG 1 cut(s) 527
BshFI GGCC 5 cut(s) 45, 374, 517, 695, 720
BsiHKAI GWGCWC 1 cut(s) 291
BslI CCNNNNNNNGG 2 cut(s) 41, 702
BsmI GAATGC 1 cut(s) 148
BsnI GGCC 5 cut(s) 45, 374, 517, 695, 720
Bsp1286I GDGCHC 2 cut(s) 291, 364
Bsp143I GATC 4 cut(s) 118, 175, 300, 603
Bsp19I CCATGG 1 cut(s) 215
BspACI CCGC 2 cut(s) 413, 527
BspANI GGCC 5 cut(s) 45, 374, 517, 695, 720
BspFNI CGCG 1 cut(s) 527
BspHI TCATGA 1 cut(s) 138
BspLI GGNNCC 1 cut(s) 501
BspMAI CTGCAG 1 cut(s) 424
BspPI GGATC 2 cut(s) 126, 611
BsrDI GCAATG 1 cut(s) 336
BsrI ACTGG 2 cut(s) 532, 721
BssECI CCNNGG 2 cut(s) 215, 272
BssMI GATC 4 cut(s) 118, 175, 300, 603
BssSI CACGAG 1 cut(s) 128
BssT1I CCWWGG 1 cut(s) 215
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 273
Bst4CI ACNGT 2 cut(s) 75, 453
Bst6I CTCTTC 1 cut(s) 163
BstAPI GCANNNNNTGC 1 cut(s) 428
BstC8I GCNNGC 1 cut(s) 8
BstDEI CTNAG 1 cut(s) 488
BstDSI CCRYGG 1 cut(s) 215
BstF5I GGATG 2 cut(s) 362, 762
BstFNI CGCG 1 cut(s) 527
BstKTI GATC 4 cut(s) 121, 178, 303, 606
BstMBI GATC 4 cut(s) 118, 175, 300, 603
BstMWI GCNNNNNNNGC 2 cut(s) 419, 428
BstNI CCWGG 1 cut(s) 273
BstPAI GACNNNNGTC 1 cut(s) 704
BstSCI CCNGG 1 cut(s) 271
BstSFI CTRYAG 3 cut(s) 147, 420, 612
BstUI CGCG 1 cut(s) 527
BstV1I GCAGC 2 cut(s) 406, 428
BsuRI GGCC 5 cut(s) 45, 374, 517, 695, 720
BtgI CCRYGG 1 cut(s) 215
BtsCI GGATG 2 cut(s) 362, 762
BtsIMutI CAGTG 1 cut(s) 80
Cac8I GCNNGC 1 cut(s) 8
CciI TCATGA 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 529
CspCI CAANNNNNGTGG 2 cut(s) 697, 732
CviAII CATG 5 cut(s) 47, 89, 139, 216, 697
DdeI CTNAG 1 cut(s) 488
DpnI GATC 4 cut(s) 120, 177, 302, 605
DpnII GATC 4 cut(s) 118, 175, 300, 603
EaeI YGGCCR 4 cut(s) 372, 515, 693, 718
Eam1104I CTCTTC 1 cut(s) 163
EarI CTCTTC 1 cut(s) 163
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 1 cut(s) 215
Eco24I GRGCYC 2 cut(s) 291, 364
Eco47I GGWCC 1 cut(s) 529
Eco53kI GAGCTC 1 cut(s) 289
Eco57I CTGAAG 1 cut(s) 270
EcoICRI GAGCTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 271
EcoT14I CCWWGG 1 cut(s) 215
EcoT38I GRGCYC 2 cut(s) 291, 364
ErhI CCWWGG 1 cut(s) 215
FaeI CATG 5 cut(s) 50, 92, 142, 219, 700
FatI CATG 5 cut(s) 46, 88, 138, 215, 696
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 3 cut(s) 414, 417, 420
FokI GGATG 1 cut(s) 369
FriOI GRGCYC 2 cut(s) 291, 364
Fsp4HI GCNGC 3 cut(s) 414, 417, 420
FspBI CTAG 2 cut(s) 669, 702
GluI GCNGC 3 cut(s) 414, 417, 420
GsaI CCCAGC 2 cut(s) 38, 239
HaeIII GGCC 5 cut(s) 45, 374, 517, 695, 720
Hin1II CATG 5 cut(s) 50, 92, 142, 219, 700
HinfI GANTC 2 cut(s) 135, 468
HphI GGTGA 1 cut(s) 329
Hpy188I TCNGA 2 cut(s) 250, 665
Hpy188III TCNNGA 6 cut(s) 109, 128, 139, 200, 365, 391
Hpy99I CGWCG 1 cut(s) 656
HpyAV CCTTC 4 cut(s) 308, 562, 625, 707
HpyCH4III ACNGT 2 cut(s) 75, 453
HpyCH4V TGCA 1 cut(s) 422
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 428
HpyF3I CTNAG 1 cut(s) 488
Hsp92II CATG 5 cut(s) 50, 92, 142, 219, 700
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 4 cut(s) 118, 175, 300, 603
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 2 cut(s) 406, 428
LweI GCATC 1 cut(s) 258
MaeI CTAG 2 cut(s) 669, 702
MaeIII GTNAC 3 cut(s) 100, 317, 548
MalI GATC 4 cut(s) 120, 177, 302, 605
MboI GATC 4 cut(s) 118, 175, 300, 603
MboII GAAGA 2 cut(s) 180, 310
MhlI GDGCHC 2 cut(s) 291, 364
MlsI TGGCCA 3 cut(s) 517, 695, 720
MluCI AATT 6 cut(s) 51, 195, 436, 621, 658, 742
MluNI TGGCCA 3 cut(s) 517, 695, 720
MlyI GAGTC 1 cut(s) 144
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 3 cut(s) 214, 277, 304
Mox20I TGGCCA 3 cut(s) 517, 695, 720
MroXI GAANNNNTTC 1 cut(s) 642
MscI TGGCCA 3 cut(s) 517, 695, 720
MseI TTAA 4 cut(s) 80, 455, 474, 624
MslI CAYNNNNRTG 1 cut(s) 107
Msp20I TGGCCA 3 cut(s) 517, 695, 720
MspA1I CMGCKG 1 cut(s) 419
MspR9I CCNGG 1 cut(s) 273
Mva1269I GAATGC 1 cut(s) 148
MvaI CCWGG 1 cut(s) 273
MvnI CGCG 1 cut(s) 527
MwoI GCNNNNNNNGC 2 cut(s) 419, 428
NcoI CCATGG 1 cut(s) 215
NdeII GATC 4 cut(s) 118, 175, 300, 603
NlaIII CATG 5 cut(s) 50, 92, 142, 219, 700
NlaIV GGNNCC 1 cut(s) 501
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 2 cut(s) 100, 317
OliI CACNNNNGTG 1 cut(s) 107
PagI TCATGA 1 cut(s) 138
PctI GAATGC 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 1 cut(s) 468
PkrI GCNGC 3 cut(s) 415, 418, 421
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PshAI GACNNNNGTC 1 cut(s) 704
PshBI ATTAAT 1 cut(s) 474
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 1 cut(s) 271
PspFI CCCAGC 2 cut(s) 34, 235
PspGI CCWGG 1 cut(s) 271
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 1 cut(s) 529
PstI CTGCAG 1 cut(s) 424
PvuII CAGCTG 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 107
SacI GAGCTC 1 cut(s) 291
SaqAI TTAA 4 cut(s) 80, 455, 474, 624
SatI GCNGC 3 cut(s) 414, 417, 420
Sau3AI GATC 4 cut(s) 118, 175, 300, 603
Sau96I GGNCC 1 cut(s) 529
SchI GAGTC 1 cut(s) 144
ScrFI CCNGG 1 cut(s) 273
SduI GDGCHC 2 cut(s) 291, 364
SfaNI GCATC 1 cut(s) 258
SfcI CTRYAG 3 cut(s) 147, 420, 612
SinI GGWCC 1 cut(s) 529
SmiMI CAYNNNNRTG 1 cut(s) 107
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
Sse9I AATT 6 cut(s) 51, 195, 436, 621, 658, 742
SsiI CCGC 2 cut(s) 413, 527
SspMI CTAG 2 cut(s) 669, 702
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 1 cut(s) 271
StyI CCWWGG 1 cut(s) 215
TaaI ACNGT 2 cut(s) 75, 453
TasI AATT 6 cut(s) 51, 195, 436, 621, 658, 742
TauI GCSGC 1 cut(s) 416
TfiI GAWTC 1 cut(s) 468
Tru1I TTAA 4 cut(s) 80, 455, 474, 624
Tru9I TTAA 4 cut(s) 80, 455, 474, 624
TscAI CASTG 1 cut(s) 80
TseFI GTSAC 2 cut(s) 100, 317
TseI GCWGC 2 cut(s) 416, 419
Tsp45I GTSAC 2 cut(s) 100, 317
TspDTI ATGAA 5 cut(s) 155, 171, 173, 337, 736
TspGWI ACGGA 1 cut(s) 131
TspRI CASTG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 529
VspI ATTAAT 1 cut(s) 474
XapI RAATTY 3 cut(s) 436, 658, 742
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 2 cut(s) 669, 702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.