Rmu_sc0006218.1_g000019

UDP-glycosyltransferase 83A1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006218.1
Physical Location & Seq
Forward (+)
85547 .. 87215
1669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006218.1_g000019.1.cds

Sequence Viewer

Length: 1305 bp
atggagttctcgcagtgcttagcacgtcatggcttcaaagtcacatttgtgaacacagaacatattcacaagcaaattgtgaatgcaatatccgatgaaagttatataaggcatgatcatgttcatctggtttcaattccagatgggttagaatcccaagaggaaaggaatgggccacggctgctatccgaagcaatacaagcagtcatgcaccagaatttggaggatctcatagagaagatcaacaaagaggaaggtgcaaaaatcacttgtctcatagctgatgagagttgtgggtgggctctggaagtggcacaaaaattgaagattgcgagggtggttgccttttggcctgcagcagctgcaactttggtattgaacttttgtatcccaaaattaattcatgaaggaatcattgaatatgatggaactgtattgaaaagccagatggttcagttggcaccaaaaatgcccatgattaaatctacaaactttgtgtgggcgtgtacaggaaattcaagcactcagaaaatcctattccaatttatggaaagaaccaacaagaatgcaaaattggtagactggcttgtttgcaactcaacatacgaaatggagccaacagcattcgctttggaaccacagatattaccaataggcccgcttttagctagcagccgccttggcaactcagcaggcagcttgtggccaacagactcaacttgcttaaattggttggataaaaaaccaccttgctcagtgatctatgttgcatttggtagcacaacagttttcaatcaaacccaattccaagaactggctttagctcttgagttgtctaataggccattcctctgggttgtgagaccagataccagtgataacattccctaccctgaaggatatcatgacagagtaggatctaatggactaatggtgagctgggccccacaacagaacgttctggcccatccttcaattgcttgcttcctaagtcattgtgggtggaactctaccatggaaggtgtcagcaatggggttcctttcttgtgctggccatactttgctgaccagttcatcaatgagagctacatttgcgatgtttgggaggtcggattggggtttgataagaatgaaagtgggatcattactcaaggagaaatcaagaacaaaatcgagcacttgcttggtgataaagacttcaaagcaagggcttccaaactcaaggaaatggccatgacaactgtcaaagaaggaggccaatctaacaagatattgaagaatttaattgaatggatcaagtcatag
Functional Annotation

Protein Analysis

434

Amino Acids

48.61

Weight (kDa)

5.69

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 460
AccB7I CCANNNNNTGG 3 cut(s) 220, 547, 814
AccI GTMKAC 1 cut(s) 579
AciI CCGC 2 cut(s) 659, 676
AclI AACGTT 1 cut(s) 957
AclWI GGATC 4 cut(s) 234, 925, 1148, 1301
AcoI YGGCCR 3 cut(s) 704, 1052, 1230
AcsI RAATTY 3 cut(s) 217, 514, 1279
AcuI CTGAAG 1 cut(s) 915
AfaI GTAC 1 cut(s) 508
AfiI CCNNNNNNNGG 3 cut(s) 220, 547, 814
AjiI CACGTC 1 cut(s) 26
AjuI GAANNNNNNNTTGG 2 cut(s) 557, 589
AleI CACNNNNGTG 1 cut(s) 47
AluBI AGCT 7 cut(s) 281, 362, 668, 699, 824, 939, 1086
AluI AGCT 7 cut(s) 281, 362, 668, 699, 824, 939, 1086
Alw21I GWGCWC 1 cut(s) 1179
Alw26I GTCTC 2 cut(s) 278, 856
AlwI GGATC 4 cut(s) 234, 925, 1148, 1301
AlwNI CAGNNNCTG 1 cut(s) 362
ApaI GGGCCC 1 cut(s) 946
ApeKI GCWGC 6 cut(s) 181, 356, 359, 362, 672, 696
ApoI RAATTY 3 cut(s) 217, 514, 1279
AseI ATTAAT 1 cut(s) 398
Asp700I GAANNNNTTC 1 cut(s) 63
AspS9I GGNCC 5 cut(s) 173, 656, 942, 943, 964
AsuHPI GGTGA 2 cut(s) 946, 1199
AsuNHI GCTAGC 1 cut(s) 668
BaeGI GKGCMC 1 cut(s) 946
BaeI ACNNNNGTAYC 2 cut(s) 370, 403
BalI TGGCCA 3 cut(s) 706, 1054, 1232
BanI GGYRCC 1 cut(s) 460
BanII GRGCYC 2 cut(s) 304, 946
Bbv12I GWGCWC 1 cut(s) 1179
BbvI GCAGC 6 cut(s) 168, 349, 368, 371, 684, 708
BccI CCATC 4 cut(s) 137, 419, 442, 975
BceAI ACGGC 1 cut(s) 194
BciVI GTATCC 1 cut(s) 398
BclI TGATCA 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 278, 856
BfaI CTAG 1 cut(s) 669
BfmI CTRYAG 1 cut(s) 354
BfuI GTATCC 1 cut(s) 398
BglI GCCNNNNNGGC 1 cut(s) 681
BisI GCNGC 7 cut(s) 182, 357, 360, 363, 673, 676, 697
BlpI GCTNAGC 1 cut(s) 19
BlsI GCNGC 7 cut(s) 183, 358, 361, 364, 674, 677, 698
BmgBI CACGTC 1 cut(s) 26
BmgT120I GGNCC 5 cut(s) 173, 656, 942, 943, 964
BmiI GGNNCC 6 cut(s) 462, 615, 636, 944, 945, 1038
BmtI GCTAGC 1 cut(s) 672
BoxI GACNNNNGTC 1 cut(s) 1241
Bpu1102I GCTNAGC 1 cut(s) 19
BpuEI CTTGAG 3 cut(s) 848, 1134, 1205
BsaI GGTCTC 1 cut(s) 856
BsaJI CCNNGG 3 cut(s) 176, 679, 1014
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 547, 814
Bse1I ACTGG 4 cut(s) 587, 819, 873, 1069
Bse3DI GCAATG 1 cut(s) 1036
BseDI CCNNGG 3 cut(s) 176, 679, 1014
BseGI GGATG 1 cut(s) 967
BseLI CCNNNNNNNGG 3 cut(s) 220, 547, 814
BseMI GCAATG 1 cut(s) 1036
BseMII CTCAG 3 cut(s) 539, 702, 768
BseNI ACTGG 4 cut(s) 587, 819, 873, 1069
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 6 cut(s) 168, 349, 368, 371, 684, 708
BseYI CCCAGC 1 cut(s) 939
BshNI GGYRCC 1 cut(s) 460
BsiHKAI GWGCWC 1 cut(s) 1179
BslI CCNNNNNNNGG 3 cut(s) 220, 547, 814
BsmAI GTCTC 2 cut(s) 278, 856
BsmI GAATGC 3 cut(s) 88, 571, 623
Bso31I GGTCTC 1 cut(s) 856
Bsp120I GGGCCC 1 cut(s) 942
Bsp1286I GDGCHC 3 cut(s) 304, 946, 1179
Bsp1407I TGTACA 1 cut(s) 506
Bsp143I GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
Bsp1720I GCTNAGC 1 cut(s) 19
Bsp19I CCATGG 1 cut(s) 1014
BspACI CCGC 2 cut(s) 659, 676
BspCNI CTCAG 3 cut(s) 538, 701, 767
BspHI TCATGA 2 cut(s) 403, 904
BspLI GGNNCC 6 cut(s) 462, 615, 636, 944, 945, 1038
BspMAI CTGCAG 1 cut(s) 358
BspOI GCTAGC 1 cut(s) 672
BspPI GGATC 4 cut(s) 234, 925, 1148, 1301
BspT107I GGYRCC 1 cut(s) 460
BspTNI GGTCTC 1 cut(s) 856
BsrDI GCAATG 1 cut(s) 1036
BsrGI TGTACA 1 cut(s) 506
BsrI ACTGG 4 cut(s) 587, 819, 873, 1069
BssECI CCNNGG 3 cut(s) 176, 679, 1014
BssMI GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
BssT1I CCWWGG 2 cut(s) 679, 1014
Bst4CI ACNGT 3 cut(s) 433, 787, 1243
BstAPI GCANNNNNTGC 1 cut(s) 362
BstAUI TGTACA 1 cut(s) 506
BstC8I GCNNGC 6 cut(s) 354, 659, 670, 694, 982, 1052
BstDEI CTNAG 5 cut(s) 19, 525, 688, 754, 989
BstDSI CCRYGG 2 cut(s) 176, 1014
BstF5I GGATG 1 cut(s) 967
BstKTI GATC 7 cut(s) 118, 229, 243, 762, 920, 1143, 1296
BstMAI GTCTC 2 cut(s) 278, 856
BstMBI GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
BstMWI GCNNNNNNNGC 5 cut(s) 181, 200, 362, 681, 1092
BstPAI GACNNNNGTC 1 cut(s) 1241
BstSFI CTRYAG 1 cut(s) 354
BstSLI GKGCMC 1 cut(s) 946
BstV1I GCAGC 6 cut(s) 168, 349, 368, 371, 684, 708
BstX2I RGATCY 2 cut(s) 226, 917
BstXI CCANNNNNNTGG 1 cut(s) 852
BstYI RGATCY 2 cut(s) 226, 917
BsuI GTATCC 1 cut(s) 398
BtgI CCRYGG 2 cut(s) 176, 1014
BtgZI GCGATG 1 cut(s) 1110
BtrI CACGTC 1 cut(s) 26
BtsCI GGATG 1 cut(s) 967
BtsI GCAGTG 1 cut(s) 20
BtsIMutI CAGTG 3 cut(s) 20, 762, 880
Cac8I GCNNGC 6 cut(s) 354, 659, 670, 694, 982, 1052
CaiI CAGNNNCTG 1 cut(s) 362
CciI TCATGA 2 cut(s) 403, 904
Cfr13I GGNCC 5 cut(s) 173, 656, 942, 943, 964
Csp6I GTAC 1 cut(s) 507
CviAII CATG 9 cut(s) 29, 113, 119, 208, 404, 475, 905, 1015, 1234
CviQI GTAC 1 cut(s) 507
DdeI CTNAG 5 cut(s) 19, 525, 688, 754, 989
DpnI GATC 7 cut(s) 117, 228, 242, 761, 919, 1142, 1295
DpnII GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
EaeI YGGCCR 3 cut(s) 704, 1052, 1230
Eco130I CCWWGG 2 cut(s) 679, 1014
Eco24I GRGCYC 2 cut(s) 304, 946
Eco31I GGTCTC 1 cut(s) 856
Eco32I GATATC 1 cut(s) 902
Eco57I CTGAAG 1 cut(s) 915
EcoO109I RGGNCCY 1 cut(s) 943
EcoRV GATATC 1 cut(s) 902
EcoT14I CCWWGG 2 cut(s) 679, 1014
EcoT38I GRGCYC 2 cut(s) 304, 946
ErhI CCWWGG 2 cut(s) 679, 1014
FaeI CATG 9 cut(s) 32, 116, 122, 211, 407, 478, 908, 1018, 1237
FatI CATG 9 cut(s) 28, 112, 118, 207, 403, 474, 904, 1014, 1233
FauI CCCGC 1 cut(s) 666
FbaI TGATCA 1 cut(s) 115
FblI GTMKAC 1 cut(s) 579
Fnu4HI GCNGC 7 cut(s) 182, 357, 360, 363, 673, 676, 697
FokI GGATG 1 cut(s) 954
FriOI GRGCYC 2 cut(s) 304, 946
Fsp4HI GCNGC 7 cut(s) 182, 357, 360, 363, 673, 676, 697
FspBI CTAG 1 cut(s) 669
GluI GCNGC 7 cut(s) 182, 357, 360, 363, 673, 676, 697
GsaI CCCAGC 1 cut(s) 943
Hin1II CATG 9 cut(s) 32, 116, 122, 211, 407, 478, 908, 1018, 1237
HinfI GANTC 3 cut(s) 152, 411, 713
HphI GGTGA 2 cut(s) 946, 1199
Hpy166II GTNNAC 3 cut(s) 52, 507, 580
Hpy188I TCNGA 4 cut(s) 94, 190, 528, 1112
Hpy188III TCNNGA 6 cut(s) 140, 305, 404, 827, 905, 1162
Hpy8I GTNNAC 3 cut(s) 52, 507, 580
HpyAV CCTTC 6 cut(s) 248, 401, 890, 981, 1013, 1244
HpyCH4III ACNGT 3 cut(s) 433, 787, 1243
HpyCH4IV ACGT 2 cut(s) 25, 957
HpyCH4V TGCA 8 cut(s) 86, 211, 260, 356, 365, 569, 594, 770
HpyF10VI GCNNNNNNNGC 5 cut(s) 181, 200, 362, 681, 1092
HpyF3I CTNAG 5 cut(s) 19, 525, 688, 754, 989
HpySE526I ACGT 2 cut(s) 25, 957
Hsp92II CATG 9 cut(s) 32, 116, 122, 211, 407, 478, 908, 1018, 1237
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
LmnI GCTCC 1 cut(s) 613
Lsp1109I GCAGC 6 cut(s) 168, 349, 368, 371, 684, 708
MaeI CTAG 1 cut(s) 669
MaeII ACGT 2 cut(s) 25, 957
MaeIII GTNAC 1 cut(s) 40
MalI GATC 7 cut(s) 117, 228, 242, 761, 919, 1142, 1295
MboI GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
MboII GAAGA 3 cut(s) 250, 337, 1288
MfeI CAATTG 1 cut(s) 975
MflI RGATCY 2 cut(s) 226, 917
MhlI GDGCHC 3 cut(s) 304, 946, 1179
MlsI TGGCCA 3 cut(s) 706, 1054, 1232
MluNI TGGCCA 3 cut(s) 706, 1054, 1232
MlyI GAGTC 1 cut(s) 707
MmeI TCCRAC 2 cut(s) 714, 1090
MnlI CCTC 7 cut(s) 154, 217, 244, 327, 860, 1099, 1247
Mox20I TGGCCA 3 cut(s) 706, 1054, 1232
MroXI GAANNNNTTC 1 cut(s) 63
MscI TGGCCA 3 cut(s) 706, 1054, 1232
MseI TTAA 4 cut(s) 398, 480, 725, 1283
MslI CAYNNNNRTG 2 cut(s) 47, 117
Msp20I TGGCCA 3 cut(s) 706, 1054, 1232
MspA1I CMGCKG 1 cut(s) 362
MunI CAATTG 1 cut(s) 975
Mva1269I GAATGC 3 cut(s) 88, 571, 623
MwoI GCNNNNNNNGC 5 cut(s) 181, 200, 362, 681, 1092
NcoI CCATGG 1 cut(s) 1014
NdeII GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
NheI GCTAGC 1 cut(s) 668
NlaIII CATG 9 cut(s) 32, 116, 122, 211, 407, 478, 908, 1018, 1237
NlaIV GGNNCC 6 cut(s) 462, 615, 636, 944, 945, 1038
NmuCI GTSAC 1 cut(s) 40
OliI CACNNNNGTG 1 cut(s) 47
PagI TCATGA 2 cut(s) 403, 904
PctI GAATGC 3 cut(s) 88, 571, 623
PdmI GAANNNNTTC 1 cut(s) 63
PfeI GAWTC 2 cut(s) 152, 411
PflMI CCANNNNNTGG 3 cut(s) 220, 547, 814
PkrI GCNGC 7 cut(s) 183, 358, 361, 364, 674, 677, 698
PleI GAGTC 1 cut(s) 707
PpsI GAGTC 1 cut(s) 707
PshAI GACNNNNGTC 1 cut(s) 1241
PshBI ATTAAT 1 cut(s) 398
Psp1406I AACGTT 1 cut(s) 957
PspFI CCCAGC 1 cut(s) 939
PspN4I GGNNCC 6 cut(s) 462, 615, 636, 944, 945, 1038
PspOMI GGGCCC 1 cut(s) 942
PspPI GGNCC 5 cut(s) 173, 656, 942, 943, 964
PstI CTGCAG 1 cut(s) 358
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 2 cut(s) 226, 917
PvuII CAGCTG 1 cut(s) 362
RsaI GTAC 1 cut(s) 508
RsaNI GTAC 1 cut(s) 507
RseI CAYNNNNRTG 2 cut(s) 47, 117
SaqAI TTAA 4 cut(s) 398, 480, 725, 1283
SatI GCNGC 7 cut(s) 182, 357, 360, 363, 673, 676, 697
Sau3AI GATC 7 cut(s) 115, 226, 240, 759, 917, 1140, 1293
Sau96I GGNCC 5 cut(s) 173, 656, 942, 943, 964
SchI GAGTC 1 cut(s) 707
SduI GDGCHC 3 cut(s) 304, 946, 1179
SfcI CTRYAG 1 cut(s) 354
SmiMI CAYNNNNRTG 2 cut(s) 47, 117
SmlI CTYRAG 3 cut(s) 827, 1149, 1220
SmoI CTYRAG 3 cut(s) 827, 1149, 1220
SsiI CCGC 2 cut(s) 659, 676
SspMI CTAG 1 cut(s) 669
StyI CCWWGG 2 cut(s) 679, 1014
TaaI ACNGT 3 cut(s) 433, 787, 1243
TaiI ACGT 2 cut(s) 28, 960
TaqI TCGA 1 cut(s) 1173
TatI WGTACW 1 cut(s) 506
TauI GCSGC 1 cut(s) 678
TfiI GAWTC 2 cut(s) 152, 411
Tru1I TTAA 4 cut(s) 398, 480, 725, 1283
Tru9I TTAA 4 cut(s) 398, 480, 725, 1283
TscAI CASTG 3 cut(s) 20, 762, 880
TseFI GTSAC 1 cut(s) 40
TseI GCWGC 6 cut(s) 181, 356, 359, 362, 672, 696
Tsp45I GTSAC 1 cut(s) 40
TspDTI ATGAA 6 cut(s) 111, 113, 392, 420, 1063, 1146
TspRI CASTG 3 cut(s) 20, 762, 880
Van91I CCANNNNNTGG 3 cut(s) 220, 547, 814
VspI ATTAAT 1 cut(s) 398
XapI RAATTY 3 cut(s) 217, 514, 1279
XmiI GTMKAC 1 cut(s) 579
XmnI GAANNNNTTC 1 cut(s) 63
XspI CTAG 1 cut(s) 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.