Rmu_sc0006218.1_g000017

UDP-glycosyltransferase 83A1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006218.1
Physical Location & Seq
Forward (+)
79305 .. 79847
543 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006218.1_g000017.1.cds

Sequence Viewer

Length: 543 bp
atgtgcaagccacatattatagccattccttacccagctcaaggccatgtaattcccttgatggagttatcacagtgcttagtgaatgaaggcttcaaagtcacatttgtgaacacagattttaaccacaagcgagtcatgaattccttggcagctgaaactcataaaagggatgatcagatttgtctggtttcaattccggatgggttagaaccatgggaggacagaaatgagttagggcagctatgtgaagcaatacttagagtcatgcctgggaagttggaggagctcatagagaagatcaaggaagaagaaggtgataaagttgcctgtatcattgctgatgagagtaacggatgggctctggaagtagcagagaaaatgcaaataaagaaagttgcattctggcctgcgtcagctgcacttttggcactggagttttgtatcccaaaattaattcaagaaggaatcattgatgatgatggtgagttattcgtctgtcacatacttgtcaatatcatatgcaacactgctgtgcaataa
Functional Annotation

Protein Analysis

180

Amino Acids

20.14

Weight (kDa)

4.73

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 199
AcsI RAATTY 1 cut(s) 142
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 3 cut(s) 97, 195, 461
AjnI CCWGG 1 cut(s) 271
AleI CACNNNNGTG 2 cut(s) 107, 533
AluBI AGCT 5 cut(s) 38, 155, 244, 289, 419
AluI AGCT 5 cut(s) 38, 155, 244, 289, 419
Alw21I GWGCWC 1 cut(s) 291
Aor13HI TCCGGA 1 cut(s) 199
AoxI GGCC 2 cut(s) 43, 407
ApeKI GCWGC 3 cut(s) 152, 241, 419
ApoI RAATTY 1 cut(s) 142
AseI ATTAAT 1 cut(s) 455
AsuHPI GGTGA 2 cut(s) 329, 497
BanII GRGCYC 2 cut(s) 291, 364
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 3 cut(s) 164, 253, 406
BccI CCATC 4 cut(s) 55, 197, 351, 476
BciT130I CCWGG 1 cut(s) 273
BciVI GTATCC 1 cut(s) 455
BclI TGATCA 1 cut(s) 175
BfuI GTATCC 1 cut(s) 455
BisI GCNGC 3 cut(s) 153, 242, 420
BlsI GCNGC 3 cut(s) 154, 243, 421
Bme1390I CCNGG 1 cut(s) 273
BmrFI CCNGG 1 cut(s) 273
BpmI CTGGAG 1 cut(s) 455
BpuEI CTTGAG 1 cut(s) 24
BsaJI CCNNGG 3 cut(s) 147, 215, 272
BsaWI WCCGGW 1 cut(s) 199
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 438
Bse3DI GCAATG 1 cut(s) 336
BseAI TCCGGA 1 cut(s) 199
BseBI CCWGG 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 147, 215, 272
BseGI GGATG 3 cut(s) 178, 208, 362
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMI GCAATG 1 cut(s) 336
BseNI ACTGG 1 cut(s) 438
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 3 cut(s) 164, 253, 406
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 1 cut(s) 405
BshFI GGCC 2 cut(s) 45, 409
BsiHKAI GWGCWC 1 cut(s) 291
BsiSI CCGG 1 cut(s) 200
BslI CCNNNNNNNGG 1 cut(s) 41
BsmI GAATGC 1 cut(s) 401
BsnI GGCC 2 cut(s) 45, 409
Bsp1286I GDGCHC 2 cut(s) 291, 364
Bsp13I TCCGGA 1 cut(s) 199
Bsp143I GATC 2 cut(s) 175, 300
Bsp19I CCATGG 1 cut(s) 215
BspANI GGCC 2 cut(s) 45, 409
BspEI TCCGGA 1 cut(s) 199
BspHI TCATGA 1 cut(s) 138
BsrDI GCAATG 1 cut(s) 336
BsrI ACTGG 1 cut(s) 438
BssECI CCNNGG 3 cut(s) 147, 215, 272
BssMI GATC 2 cut(s) 175, 300
BssT1I CCWWGG 2 cut(s) 147, 215
Bst2UI CCWGG 1 cut(s) 273
Bst4CI ACNGT 1 cut(s) 75
BstC8I GCNNGC 2 cut(s) 8, 411
BstDEI CTNAG 2 cut(s) 79, 260
BstDSI CCRYGG 1 cut(s) 215
BstF5I GGATG 3 cut(s) 178, 208, 362
BstKTI GATC 2 cut(s) 178, 303
BstMBI GATC 2 cut(s) 175, 300
BstMWI GCNNNNNNNGC 2 cut(s) 419, 428
BstNI CCWGG 1 cut(s) 273
BstSCI CCNGG 1 cut(s) 271
BstV1I GCAGC 3 cut(s) 164, 253, 406
BsuI GTATCC 1 cut(s) 455
BsuRI GGCC 2 cut(s) 45, 409
BtgI CCRYGG 1 cut(s) 215
BtsCI GGATG 3 cut(s) 178, 208, 362
BtsI GCAGTG 1 cut(s) 528
BtsIMutI CAGTG 3 cut(s) 80, 431, 528
Cac8I GCNNGC 2 cut(s) 8, 411
CciI TCATGA 1 cut(s) 138
CseI GACGC 1 cut(s) 402
CviAII CATG 4 cut(s) 47, 139, 216, 268
DdeI CTNAG 2 cut(s) 79, 260
DpnI GATC 2 cut(s) 177, 302
DpnII GATC 2 cut(s) 175, 300
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 2 cut(s) 147, 215
Eco24I GRGCYC 2 cut(s) 291, 364
Eco53kI GAGCTC 1 cut(s) 289
EcoICRI GAGCTC 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 271
EcoT14I CCWWGG 2 cut(s) 147, 215
EcoT38I GRGCYC 2 cut(s) 291, 364
ErhI CCWWGG 2 cut(s) 147, 215
FaeI CATG 4 cut(s) 50, 142, 219, 271
FalI AAGNNNNNCTT 2 cut(s) 243, 275
FatI CATG 4 cut(s) 46, 138, 215, 267
FauNDI CATATG 1 cut(s) 521
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 3 cut(s) 153, 242, 420
FokI GGATG 3 cut(s) 185, 215, 369
FriOI GRGCYC 2 cut(s) 291, 364
Fsp4HI GCNGC 3 cut(s) 153, 242, 420
GluI GCNGC 3 cut(s) 153, 242, 420
GsaI CCCAGC 1 cut(s) 38
GsuI CTGGAG 1 cut(s) 455
HaeIII GGCC 2 cut(s) 45, 409
HapII CCGG 1 cut(s) 200
HgaI GACGC 1 cut(s) 402
Hin1II CATG 4 cut(s) 50, 142, 219, 271
HinfI GANTC 3 cut(s) 135, 264, 468
HpaII CCGG 1 cut(s) 200
HphI GGTGA 2 cut(s) 329, 497
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 1 cut(s) 180
Hpy188III TCNNGA 4 cut(s) 139, 200, 365, 461
Hpy8I GTNNAC 1 cut(s) 112
HpyAV CCTTC 3 cut(s) 83, 308, 458
HpyCH4III ACNGT 1 cut(s) 75
HpyCH4V TGCA 6 cut(s) 6, 385, 401, 422, 525, 538
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 428
HpyF3I CTNAG 2 cut(s) 79, 260
Hsp92II CATG 4 cut(s) 50, 142, 219, 271
Kpn2I TCCGGA 1 cut(s) 199
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 2 cut(s) 175, 300
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 3 cut(s) 164, 253, 406
MaeIII GTNAC 3 cut(s) 100, 350, 500
MalI GATC 2 cut(s) 177, 302
MboI GATC 2 cut(s) 175, 300
MboII GAAGA 3 cut(s) 310, 320, 323
MhlI GDGCHC 2 cut(s) 291, 364
MluCI AATT 5 cut(s) 51, 142, 195, 452, 456
MlyI GAGTC 2 cut(s) 144, 273
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 2 cut(s) 214, 277
MroI TCCGGA 1 cut(s) 199
MseI TTAA 2 cut(s) 123, 455
MslI CAYNNNNRTG 2 cut(s) 107, 533
MspA1I CMGCKG 2 cut(s) 155, 419
MspI CCGG 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 273
Mva1269I GAATGC 1 cut(s) 401
MvaI CCWGG 1 cut(s) 273
MwoI GCNNNNNNNGC 2 cut(s) 419, 428
NcoI CCATGG 1 cut(s) 215
NdeI CATATG 1 cut(s) 521
NdeII GATC 2 cut(s) 175, 300
NlaIII CATG 4 cut(s) 50, 142, 219, 271
NmuCI GTSAC 2 cut(s) 100, 500
OliI CACNNNNGTG 2 cut(s) 107, 533
PagI TCATGA 1 cut(s) 138
PctI GAATGC 1 cut(s) 401
PfeI GAWTC 1 cut(s) 468
PkrI GCNGC 3 cut(s) 154, 243, 421
PleI GAGTC 2 cut(s) 143, 272
PpsI GAGTC 2 cut(s) 143, 272
PshBI ATTAAT 1 cut(s) 455
Psp124BI GAGCTC 1 cut(s) 291
Psp6I CCWGG 1 cut(s) 271
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 271
PvuII CAGCTG 2 cut(s) 155, 419
RseI CAYNNNNRTG 2 cut(s) 107, 533
SacI GAGCTC 1 cut(s) 291
SaqAI TTAA 2 cut(s) 123, 455
SatI GCNGC 3 cut(s) 153, 242, 420
Sau3AI GATC 2 cut(s) 175, 300
SchI GAGTC 2 cut(s) 144, 273
ScrFI CCNGG 1 cut(s) 273
SduI GDGCHC 2 cut(s) 291, 364
SetI ASST 6 cut(s) 40, 157, 246, 291, 319, 421
SmiMI CAYNNNNRTG 2 cut(s) 107, 533
SmlI CTYRAG 1 cut(s) 39
SmoI CTYRAG 1 cut(s) 39
Sse9I AATT 5 cut(s) 51, 142, 195, 452, 456
SstI GAGCTC 1 cut(s) 291
StyD4I CCNGG 1 cut(s) 271
StyI CCWWGG 2 cut(s) 147, 215
TaaI ACNGT 1 cut(s) 75
TasI AATT 5 cut(s) 51, 142, 195, 452, 456
TfiI GAWTC 1 cut(s) 468
Tru1I TTAA 2 cut(s) 123, 455
Tru9I TTAA 2 cut(s) 123, 455
TscAI CASTG 3 cut(s) 80, 438, 535
TseFI GTSAC 2 cut(s) 100, 500
TseI GCWGC 3 cut(s) 152, 241, 419
Tsp45I GTSAC 2 cut(s) 100, 500
TspDTI ATGAA 2 cut(s) 102, 155
TspGWI ACGGA 1 cut(s) 369
TspRI CASTG 3 cut(s) 80, 438, 535
VspI ATTAAT 1 cut(s) 455
XapI RAATTY 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.