Rorug02G0519800

UDP-glycosyltransferase 83A1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
65203169 .. 65205751
2583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0519800.1

Sequence Viewer

Length: 747 bp
ATGTTTATTACGATCCGGATCTTGTCGGACTTGAGCCACTCACCGCAATTGTACCCGCTGGATGTCGACCACAGCGGGATTTTGTACACTGCGACCTCGCGCACCACTAGCAGCTTAAGAATCCTCGTCGTCGCCGCCGCCGCGATCCATCTCCTTCGTCACTATAAGCTCGATCTCCCCGACGATCTCCTTTCCTCCAAACCCTCCGATCAGTCCTGGACCTCCAAAGTCTGGGCATTATCAGTAATCTGTGAGTATTTCTTATCCTTTCTTCAAGCTCGGAGAAATCGTCACCACCATCCCTACCATCAGAACATCAGCTTCACTTTGTGGGATGTAGGGGGTCAGGACAAGATCCGTCCATTGTGGAGGCACTACTTCCAGAACACTCAAGGTCTTATTTTTGTGGTTGATCGCAATGACAGGGATCGAGTTGTTGAGGCAAGGGATGAGTTGCACAGGATTTTCTTCATGAGCAATTATGGTGCATGCCCTGATGAACTGAGGGATGCTATTTTGCTTGTATTTGCCAACAAACAAGATCTTCCTACTGCAATGAATGCTGCAGAAATAACTGATAAGCTTAGGCTTCATTCTCTCCGCCAACGTCACTGGTACATTCAGAGCACATGTGCAACCTTGGGCGAGGGACTGTACGAGGGATTGGATTGGCTTTCCAACGACATTGCTAGCAAGGCAAGCTCAATAAAATCAATCTTTTACAGTAATTTTAGCTCATGGTGTTAG
Functional Annotation

Protein Analysis

248

Amino Acids

28.7

Weight (kDa)

7.2

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Roc PF08477 102 - 145 1.5e-06 Ras of Complex, Roc, domain of DAPkinase
G-alpha PF00503 102 - 150 2.7e-06 G-protein alpha subunit
Arf PF00025 103 - 229 1.5e-45 ADP-ribosylation factor family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 231
AccI GTMKAC 1 cut(s) 66
AccII CGCG 2 cut(s) 100, 143
AccIII TCCGGA 1 cut(s) 15
AciI CCGC 7 cut(s) 44, 56, 75, 135, 138, 141, 601
AclWI GGATC 5 cut(s) 7, 26, 139, 349, 435
AdeI CACNNNGTG 1 cut(s) 330
AfaI GTAC 4 cut(s) 53, 86, 617, 656
AfiI CCNNNNNNNGG 1 cut(s) 231
AflII CTTAAG 1 cut(s) 115
AflIII ACRYGT 1 cut(s) 629
AgsI TTSAA 1 cut(s) 275
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 7 cut(s) 114, 169, 278, 321, 583, 702, 735
AluI AGCT 7 cut(s) 114, 169, 278, 321, 583, 702, 735
Alw21I GWGCWC 1 cut(s) 629
AlwI GGATC 5 cut(s) 7, 26, 139, 349, 435
Aor13HI TCCGGA 1 cut(s) 15
ApeKI GCWGC 2 cut(s) 111, 563
AspLEI GCGC 1 cut(s) 102
AspS9I GGNCC 1 cut(s) 219
AsuHPI GGTGA 2 cut(s) 33, 284
AsuNHI GCTAGC 1 cut(s) 689
AvaII GGWCC 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 629
BbvI GCAGC 2 cut(s) 123, 550
BccI CCATC 3 cut(s) 156, 306, 315
BciT130I CCWGG 1 cut(s) 217
BfaI CTAG 2 cut(s) 108, 690
BfmI CTRYAG 1 cut(s) 564
BfrI CTTAAG 1 cut(s) 115
BglII AGATCT 1 cut(s) 541
BisI GCNGC 5 cut(s) 112, 135, 138, 141, 564
BlsI GCNGC 5 cut(s) 113, 136, 139, 142, 565
Bme1390I CCNGG 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 219
BmrFI CCNGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 499
BmtI GCTAGC 1 cut(s) 693
Bpu10I CCTNAGC 1 cut(s) 584
BpuEI CTTGAG 2 cut(s) 52, 375
BsaBI GATNNNNATC 1 cut(s) 17
BsaJI CCNNGG 1 cut(s) 639
BsaWI WCCGGW 1 cut(s) 15
BsaXI ACNNNNNCTCC 2 cut(s) 274, 304
Bsc4I CCNNNNNNNGG 1 cut(s) 231
Bse1I ACTGG 1 cut(s) 617
Bse3DI GCAATG 3 cut(s) 424, 561, 684
Bse8I GATNNNNATC 1 cut(s) 17
BseAI TCCGGA 1 cut(s) 15
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 639
BseGI GGATG 5 cut(s) 67, 298, 340, 454, 514
BseJI GATNNNNATC 1 cut(s) 17
BseLI CCNNNNNNNGG 1 cut(s) 231
BseMI GCAATG 3 cut(s) 424, 561, 684
BseMII CTCAG 1 cut(s) 494
BseNI ACTGG 1 cut(s) 617
BseXI GCAGC 2 cut(s) 123, 550
Bsh1236I CGCG 2 cut(s) 100, 143
BsiHKAI GWGCWC 1 cut(s) 629
BsiSI CCGG 1 cut(s) 16
BslFI GGGAC 1 cut(s) 663
BslI CCNNNNNNNGG 1 cut(s) 231
BsmFI GGGAC 1 cut(s) 663
BsmI GAATGC 1 cut(s) 565
Bsp1286I GDGCHC 1 cut(s) 629
Bsp13I TCCGGA 1 cut(s) 15
Bsp1407I TGTACA 1 cut(s) 84
BspACI CCGC 7 cut(s) 44, 56, 75, 135, 138, 141, 601
BspCNI CTCAG 1 cut(s) 495
BspEI TCCGGA 1 cut(s) 15
BspFNI CGCG 2 cut(s) 100, 143
BspHI TCATGA 1 cut(s) 471
BspMAI CTGCAG 1 cut(s) 568
BspOI GCTAGC 1 cut(s) 693
BspPI GGATC 5 cut(s) 7, 26, 139, 349, 435
BspTI CTTAAG 1 cut(s) 115
BsrDI GCAATG 3 cut(s) 424, 561, 684
BsrGI TGTACA 1 cut(s) 84
BsrI ACTGG 1 cut(s) 617
BssECI CCNNGG 1 cut(s) 639
BssT1I CCWWGG 1 cut(s) 639
Bst2UI CCWGG 1 cut(s) 217
Bst4CI ACNGT 2 cut(s) 654, 725
BstAFI CTTAAG 1 cut(s) 115
BstAPI GCANNNNNTGC 1 cut(s) 560
BstAUI TGTACA 1 cut(s) 84
BstC8I GCNNGC 3 cut(s) 490, 691, 700
BstDEI CTNAG 2 cut(s) 503, 584
BstF5I GGATG 5 cut(s) 67, 298, 340, 454, 514
BstFNI CGCG 2 cut(s) 100, 143
BstHHI GCGC 1 cut(s) 102
BstMWI GCNNNNNNNGC 5 cut(s) 108, 140, 560, 695, 699
BstNI CCWGG 1 cut(s) 217
BstNSI RCATGY 2 cut(s) 492, 633
BstSCI CCNGG 1 cut(s) 215
BstSFI CTRYAG 1 cut(s) 564
BstUI CGCG 2 cut(s) 100, 143
BstV1I GCAGC 2 cut(s) 123, 550
BstX2I RGATCY 3 cut(s) 18, 354, 541
BstYI RGATCY 3 cut(s) 18, 354, 541
BtsCI GGATG 5 cut(s) 67, 298, 340, 454, 514
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 2 cut(s) 87, 610
Cac8I GCNNGC 3 cut(s) 490, 691, 700
CciI TCATGA 1 cut(s) 471
CfoI GCGC 1 cut(s) 102
Cfr13I GGNCC 1 cut(s) 219
Csp6I GTAC 4 cut(s) 52, 85, 616, 655
CviAII CATG 4 cut(s) 472, 489, 630, 738
CviQI GTAC 4 cut(s) 52, 85, 616, 655
DdeI CTNAG 2 cut(s) 503, 584
DraIII CACNNNGTG 1 cut(s) 330
EciI GGCGGA 1 cut(s) 590
Eco130I CCWWGG 1 cut(s) 639
Eco47I GGWCC 1 cut(s) 219
EcoRII CCWGG 1 cut(s) 215
EcoT14I CCWWGG 1 cut(s) 639
ErhI CCWWGG 1 cut(s) 639
FaeI CATG 4 cut(s) 475, 492, 633, 741
FaiI YATR 6 cut(s) 165, 473, 483, 490, 631, 739
FaqI GGGAC 1 cut(s) 663
FatI CATG 4 cut(s) 471, 488, 629, 737
FauI CCCGC 2 cut(s) 63, 68
FblI GTMKAC 1 cut(s) 66
Fnu4HI GCNGC 5 cut(s) 112, 135, 138, 141, 564
FokI GGATG 5 cut(s) 74, 285, 347, 461, 521
Fsp4HI GCNGC 5 cut(s) 112, 135, 138, 141, 564
FspBI CTAG 2 cut(s) 108, 690
GlaI GCGC 1 cut(s) 101
GluI GCNGC 5 cut(s) 112, 135, 138, 141, 564
HapII CCGG 1 cut(s) 16
HhaI GCGC 1 cut(s) 102
Hin1II CATG 4 cut(s) 475, 492, 633, 741
Hin6I GCGC 1 cut(s) 100
HinP1I GCGC 1 cut(s) 100
HincII GTYRAC 1 cut(s) 67
HindII GTYRAC 1 cut(s) 67
HindIII AAGCTT 1 cut(s) 581
HinfI GANTC 1 cut(s) 120
HpaII CCGG 1 cut(s) 16
HphI GGTGA 2 cut(s) 33, 284
Hpy166II GTNNAC 2 cut(s) 67, 87
Hpy188I TCNGA 5 cut(s) 28, 208, 282, 312, 624
Hpy188III TCNNGA 4 cut(s) 16, 347, 382, 472
Hpy8I GTNNAC 2 cut(s) 67, 87
Hpy99I CGWCG 3 cut(s) 131, 134, 185
HpyAV CCTTC 1 cut(s) 164
HpyCH4III ACNGT 2 cut(s) 654, 725
HpyCH4IV ACGT 1 cut(s) 607
HpyCH4V TGCA 5 cut(s) 457, 488, 554, 566, 635
HpyF10VI GCNNNNNNNGC 5 cut(s) 108, 140, 560, 695, 699
HpyF3I CTNAG 2 cut(s) 503, 584
HpySE526I ACGT 1 cut(s) 607
Hsp92II CATG 4 cut(s) 475, 492, 633, 741
HspAI GCGC 1 cut(s) 100
Kpn2I TCCGGA 1 cut(s) 15
Lsp1109I GCAGC 2 cut(s) 123, 550
LweI GCATC 1 cut(s) 499
MaeI CTAG 2 cut(s) 108, 690
MaeII ACGT 1 cut(s) 607
MaeIII GTNAC 3 cut(s) 158, 290, 608
MboII GAAGA 3 cut(s) 263, 460, 536
MfeI CAATTG 1 cut(s) 47
MflI RGATCY 3 cut(s) 18, 354, 541
MhlI GDGCHC 1 cut(s) 629
MluCI AATT 3 cut(s) 47, 478, 727
MmeI TCCRAC 2 cut(s) 6, 702
MroI TCCGGA 1 cut(s) 15
MseI TTAA 1 cut(s) 116
MspA1I CMGCKG 2 cut(s) 58, 75
MspCI CTTAAG 1 cut(s) 115
MspI CCGG 1 cut(s) 16
MspR9I CCNGG 1 cut(s) 217
MunI CAATTG 1 cut(s) 47
Mva1269I GAATGC 1 cut(s) 565
MvaI CCWGG 1 cut(s) 217
MvnI CGCG 2 cut(s) 100, 143
MwoI GCNNNNNNNGC 5 cut(s) 108, 140, 560, 695, 699
NheI GCTAGC 1 cut(s) 689
NlaIII CATG 4 cut(s) 475, 492, 633, 741
NmuCI GTSAC 3 cut(s) 158, 290, 608
NspI RCATGY 2 cut(s) 492, 633
PaeI GCATGC 1 cut(s) 492
PagI TCATGA 1 cut(s) 471
PciI ACATGT 1 cut(s) 629
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 286
PctI GAATGC 1 cut(s) 565
PfeI GAWTC 1 cut(s) 120
PflMI CCANNNNNTGG 1 cut(s) 231
PfoI TCCNGGA 1 cut(s) 215
PkrI GCNGC 5 cut(s) 113, 136, 139, 142, 565
PscI ACATGT 1 cut(s) 629
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
PspPI GGNCC 1 cut(s) 219
PstI CTGCAG 1 cut(s) 568
PsuI RGATCY 3 cut(s) 18, 354, 541
RsaI GTAC 4 cut(s) 53, 86, 617, 656
RsaNI GTAC 4 cut(s) 52, 85, 616, 655
SalI GTCGAC 1 cut(s) 65
SaqAI TTAA 1 cut(s) 116
SatI GCNGC 5 cut(s) 112, 135, 138, 141, 564
Sau96I GGNCC 1 cut(s) 219
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 1 cut(s) 629
SfaNI GCATC 1 cut(s) 499
SfcI CTRYAG 1 cut(s) 564
SinI GGWCC 1 cut(s) 219
SmlI CTYRAG 3 cut(s) 31, 115, 390
SmoI CTYRAG 3 cut(s) 31, 115, 390
SphI GCATGC 1 cut(s) 492
Sse9I AATT 3 cut(s) 47, 478, 727
SsiI CCGC 7 cut(s) 44, 56, 75, 135, 138, 141, 601
SspMI CTAG 2 cut(s) 108, 690
StyD4I CCNGG 1 cut(s) 215
StyI CCWWGG 1 cut(s) 639
TaaI ACNGT 2 cut(s) 654, 725
TaiI ACGT 1 cut(s) 610
TaqI TCGA 3 cut(s) 66, 171, 430
TasI AATT 3 cut(s) 47, 478, 727
TatI WGTACW 1 cut(s) 84
TauI GCSGC 3 cut(s) 137, 140, 143
TfiI GAWTC 1 cut(s) 120
Tru1I TTAA 1 cut(s) 116
Tru9I TTAA 1 cut(s) 116
TscAI CASTG 2 cut(s) 94, 617
TseFI GTSAC 3 cut(s) 158, 290, 608
TseI GCWGC 2 cut(s) 111, 563
Tsp45I GTSAC 3 cut(s) 158, 290, 608
TspDTI ATGAA 4 cut(s) 460, 513, 572, 581
TspGWI ACGGA 1 cut(s) 347
TspRI CASTG 2 cut(s) 94, 617
Van91I CCANNNNNTGG 1 cut(s) 231
Vha464I CTTAAG 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 219
XceI RCATGY 2 cut(s) 492, 633
XmiI GTMKAC 1 cut(s) 66
XspI CTAG 2 cut(s) 108, 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.