Prupe.3G256300_v2.0.a1

UDP-glycosyltransferase 83A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000438
Physical Location & Seq
Forward (+)
24453374 .. 24455782
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G256300.1

Sequence Viewer

Length: 1368 bp
ATGAGCAAACAACATATTTTAGCTATTCCTTATCCAGCACAAGGTCATGTAATTCCCTTGATGGAGTTGTCACAGTGTTTAGCTACTCATGGCTTCAAAGTCACATTTGTGAACACAGAGCACAATCATAAGCGAGTCATGAATGCTTTGGCTGATGAAAGTCATATAAGCAGGGATCATATTCATCTAGTTTCGATTCCAGACGGCTTAGAACCGTTGGAGGACAGGAATGAGCTAGGGCGGTTATCGGAAGCAATGCAACGAGTCATGCCTGGGAAGTTGGAGGAGCTGATAGAGAAGATTAACCAAGGGGAAGGCCAAAAAATCACTTGTGTCATTGCTGATCAGACTGCAGGGTGGATTCTTGAAGTAGCAGAGAAAATGAAAATCAGGAGGGTTGCCTTTTATCCTGCTGCAGCTGCACTCTTGGCGTTGAAACTTAGTATTCCAAAGTTAATTCATGAAGGAATCATTAACAATGATGGAACTGCCCCAAAAGGCCGTATGTTTCAGTTGGCACCAAACATGCCCATCATGAAAACTGAACACTTGTTGTGGTCATGTATTGGCGACTTAACCACTCAGAAAATTATATTTCAAACTATGGTAAGAAGCAACAAGACTACGCTAGCCGCAGACTGGCTTCTTTGCAACTCGGCATACGATCTAGAACCAGCAGCATTCACCTTGGCACCTGAGATTTTACCAATTGGCCCACTCTTGGCAAGCAACAGGCTTGGGAATTCAGCAGGCTACTTCTGGCCACAAGACTTAACTTGCTTAAATTGGCTGGATCAACAGCCACCCTGCTCAGTCATCTATGTTGCATTTGGCAGCTTCACAGTTCTTGATCAAACACAATTCCAAGAATTGGCTTTGGCTCTTGAGCTGTCCCAAAGGCCATTCCTCTGGGTTGTGAGGCCAGACACTATTGAAAAAACACGTAATCTCTACCCCGAAGGATATCAAGATCGAGTAGCGTCTCGTGGTTTGATGGTGGGTTGGGCACCTCAACAAAAGGCTCTAGCTCATCCTTCCATTGCTTGCTTCTTAAGCCACTGTGGTTGGAACTCTACAATAGAAGGTATAAGCAGTGGGGTTCCTTTCCTGTGCTGGCCATACTTTGCTGACCAGCTCTTTAATGAGAGCTACATTTGTGATGTTTGGAATGTGGGGTTGAAGTTCAACAAGAATGAAAGTGGGATCATTACACAAGGAGAAATCATGAACAAATTGGACCAACTGCTTGGTGATGTAGGTTTCAAAGCAAGAGCTTCCAAACTCAAGGAATTGGCCATGACCAGTGTCAAAGAAGGTGGCCAATCCAACAAGAACTTTAAGAATTTTATTGAATGGATGAAGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

456

Amino Acids

50.94

Weight (kDa)

6.32

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 517, 691, 1006
AccB7I CCANNNNNTGG 1 cut(s) 871
AciI CCGC 2 cut(s) 241, 633
AclWI GGATC 3 cut(s) 183, 801, 1211
AcoI YGGCCR 4 cut(s) 761, 1115, 1293, 1318
AcsI RAATTY 2 cut(s) 742, 1342
AfiI CCNNNNNNNGG 4 cut(s) 41, 639, 721, 871
AflII CTTAAG 1 cut(s) 1051
AflIII ACRYGT 1 cut(s) 941
AgsI TTSAA 9 cut(s) 97, 368, 436, 599, 935, 1180, 1186, 1264, 1352
AjnI CCWGG 1 cut(s) 271
AleI CACNNNNGTG 1 cut(s) 107
Alw21I GWGCWC 1 cut(s) 123
Alw26I GTCTC 1 cut(s) 987
AlwI GGATC 3 cut(s) 183, 801, 1211
AoxI GGCC 9 cut(s) 316, 499, 712, 761, 899, 920, 1115, 1293, 1318
ApeKI GCWGC 5 cut(s) 413, 416, 419, 677, 834
ApoI RAATTY 2 cut(s) 742, 1342
AspS9I GGNCC 2 cut(s) 713, 1237
AsuHPI GGTGA 2 cut(s) 676, 1262
AsuNHI GCTAGC 1 cut(s) 628
AvaII GGWCC 1 cut(s) 1237
BaeGI GKGCMC 1 cut(s) 1009
BalI TGGCCA 4 cut(s) 763, 1117, 1295, 1320
BanI GGYRCC 3 cut(s) 517, 691, 1006
BauI CACGAG 1 cut(s) 984
Bbv12I GWGCWC 1 cut(s) 123
BbvI GCAGC 5 cut(s) 400, 406, 428, 689, 846
BccI CCATC 4 cut(s) 55, 476, 539, 988
BceAI ACGGC 2 cut(s) 220, 486
BciT130I CCWGG 1 cut(s) 273
BclI TGATCA 2 cut(s) 343, 850
BcoDI GTCTC 1 cut(s) 987
BfaI CTAG 5 cut(s) 188, 236, 629, 668, 1025
BfmI CTRYAG 2 cut(s) 351, 414
BfrI CTTAAG 1 cut(s) 1051
BisI GCNGC 6 cut(s) 414, 417, 420, 633, 678, 835
BlsI GCNGC 6 cut(s) 415, 418, 421, 634, 679, 836
Bme1390I CCNGG 1 cut(s) 273
Bme18I GGWCC 1 cut(s) 1237
BmgT120I GGNCC 2 cut(s) 713, 1237
BmiI GGNNCC 4 cut(s) 519, 693, 1008, 1101
BmrFI CCNGG 1 cut(s) 273
BmtI GCTAGC 1 cut(s) 632
BoxI GACNNNNGTC 1 cut(s) 1304
BpuEI CTTGAG 2 cut(s) 905, 1268
BsaAI YACGTR 1 cut(s) 944
BsaJI CCNNGG 3 cut(s) 272, 307, 687
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 639, 721, 871
Bse1I ACTGG 2 cut(s) 644, 1302
Bse3DI GCAATG 3 cut(s) 261, 336, 1038
BseBI CCWGG 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 272, 307, 687
BseGI GGATG 2 cut(s) 1030, 1362
BseLI CCNNNNNNNGG 4 cut(s) 41, 639, 721, 871
BseMI GCAATG 3 cut(s) 261, 336, 1038
BseMII CTCAG 3 cut(s) 596, 687, 825
BseNI ACTGG 2 cut(s) 644, 1302
BseRI GAGGAG 1 cut(s) 299
BseSI GKGCMC 1 cut(s) 1009
BseXI GCAGC 5 cut(s) 400, 406, 428, 689, 846
BsgI GTGCAG 1 cut(s) 405
BshFI GGCC 9 cut(s) 318, 501, 714, 763, 901, 922, 1117, 1295, 1320
BshNI GGYRCC 3 cut(s) 517, 691, 1006
BsiHKAI GWGCWC 1 cut(s) 123
BslFI GGGAC 1 cut(s) 877
BslI CCNNNNNNNGG 4 cut(s) 41, 639, 721, 871
BsmAI GTCTC 1 cut(s) 987
BsmBI CGTCTC 1 cut(s) 987
BsmFI GGGAC 1 cut(s) 877
BsmI GAATGC 2 cut(s) 148, 680
BsnI GGCC 9 cut(s) 318, 501, 714, 763, 901, 922, 1117, 1295, 1320
Bsp1286I GDGCHC 2 cut(s) 123, 1009
Bsp143I GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
BspACI CCGC 2 cut(s) 241, 633
BspANI GGCC 9 cut(s) 318, 501, 714, 763, 901, 922, 1117, 1295, 1320
BspCNI CTCAG 3 cut(s) 595, 688, 824
BspHI TCATGA 4 cut(s) 138, 460, 534, 1224
BspLI GGNNCC 4 cut(s) 519, 693, 1008, 1101
BspMAI CTGCAG 2 cut(s) 355, 418
BspOI GCTAGC 1 cut(s) 632
BspPI GGATC 3 cut(s) 183, 801, 1211
BspT107I GGYRCC 3 cut(s) 517, 691, 1006
BspTI CTTAAG 1 cut(s) 1051
BsrDI GCAATG 3 cut(s) 261, 336, 1038
BsrI ACTGG 2 cut(s) 644, 1302
BssECI CCNNGG 3 cut(s) 272, 307, 687
BssMI GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 2 cut(s) 307, 687
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 273
Bst4CI ACNGT 4 cut(s) 75, 216, 844, 1061
BstAFI CTTAAG 1 cut(s) 1051
BstBAI YACGTR 1 cut(s) 944
BstC8I GCNNGC 5 cut(s) 630, 727, 751, 1045, 1115
BstDEI CTNAG 5 cut(s) 208, 440, 582, 696, 811
BstF5I GGATG 2 cut(s) 1030, 1362
BstKTI GATC 7 cut(s) 178, 346, 667, 796, 853, 973, 1206
BstMAI GTCTC 1 cut(s) 987
BstMBI GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
BstMWI GCNNNNNNNGC 3 cut(s) 419, 428, 1053
BstNI CCWGG 1 cut(s) 273
BstNSI RCATGY 1 cut(s) 529
BstPAI GACNNNNGTC 1 cut(s) 1304
BstSCI CCNGG 1 cut(s) 271
BstSFI CTRYAG 2 cut(s) 351, 414
BstSLI GKGCMC 1 cut(s) 1009
BstV1I GCAGC 5 cut(s) 400, 406, 428, 689, 846
BstXI CCANNNNNNTGG 2 cut(s) 909, 1247
BsuRI GGCC 9 cut(s) 318, 501, 714, 763, 901, 922, 1117, 1295, 1320
BtsCI GGATG 2 cut(s) 1030, 1362
BtsI GCAGTG 1 cut(s) 1099
BtsIMutI CAGTG 4 cut(s) 80, 1057, 1099, 1309
Cac8I GCNNGC 5 cut(s) 630, 727, 751, 1045, 1115
CciI TCATGA 4 cut(s) 138, 460, 534, 1224
Cfr13I GGNCC 2 cut(s) 713, 1237
CseI GACGC 1 cut(s) 969
CspCI CAANNNNNGTGG 4 cut(s) 1046, 1081, 1297, 1332
DdeI CTNAG 5 cut(s) 208, 440, 582, 696, 811
DpnI GATC 7 cut(s) 177, 345, 666, 795, 852, 972, 1205
DpnII GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
EaeI YGGCCR 4 cut(s) 761, 1115, 1293, 1318
Eco130I CCWWGG 2 cut(s) 307, 687
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 1 cut(s) 1237
EcoRI GAATTC 1 cut(s) 742
EcoRII CCWGG 1 cut(s) 271
EcoRV GATATC 1 cut(s) 965
EcoT14I CCWWGG 2 cut(s) 307, 687
ErhI CCWWGG 2 cut(s) 307, 687
Esp3I CGTCTC 1 cut(s) 987
FaqI GGGAC 1 cut(s) 877
FbaI TGATCA 2 cut(s) 343, 850
Fnu4HI GCNGC 6 cut(s) 414, 417, 420, 633, 678, 835
FokI GGATG 1 cut(s) 1017
Fsp4HI GCNGC 6 cut(s) 414, 417, 420, 633, 678, 835
FspBI CTAG 5 cut(s) 188, 236, 629, 668, 1025
GluI GCNGC 6 cut(s) 414, 417, 420, 633, 678, 835
HaeIII GGCC 9 cut(s) 318, 501, 714, 763, 901, 922, 1117, 1295, 1320
HgaI GACGC 1 cut(s) 969
HinfI GANTC 5 cut(s) 135, 196, 264, 361, 468
HphI GGTGA 2 cut(s) 676, 1262
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 3 cut(s) 250, 348, 585
Hpy8I GTNNAC 1 cut(s) 112
HpyAV CCTTC 6 cut(s) 308, 458, 953, 1044, 1076, 1307
HpyCH4III ACNGT 4 cut(s) 75, 216, 844, 1061
HpyCH4IV ACGT 1 cut(s) 943
HpyCH4V TGCA 6 cut(s) 259, 353, 416, 422, 651, 827
HpyF10VI GCNNNNNNNGC 3 cut(s) 419, 428, 1053
HpyF3I CTNAG 5 cut(s) 208, 440, 582, 696, 811
HpySE526I ACGT 1 cut(s) 943
Ksp22I TGATCA 2 cut(s) 343, 850
Kzo9I GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
LmnI GCTCC 1 cut(s) 286
Lsp1109I GCAGC 5 cut(s) 400, 406, 428, 689, 846
MaeI CTAG 5 cut(s) 188, 236, 629, 668, 1025
MaeII ACGT 1 cut(s) 943
MaeIII GTNAC 2 cut(s) 69, 100
MalI GATC 7 cut(s) 177, 345, 666, 795, 852, 972, 1205
MboI GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
MboII GAAGA 1 cut(s) 310
MfeI CAATTG 1 cut(s) 708
MhlI GDGCHC 2 cut(s) 123, 1009
MlsI TGGCCA 4 cut(s) 763, 1117, 1295, 1320
MluNI TGGCCA 4 cut(s) 763, 1117, 1295, 1320
MlyI GAGTC 2 cut(s) 144, 273
MmeI TCCRAC 4 cut(s) 198, 261, 1046, 1350
MnlI CCTC 6 cut(s) 214, 277, 387, 912, 917, 1020
Mox20I TGGCCA 4 cut(s) 763, 1117, 1295, 1320
MscI TGGCCA 4 cut(s) 763, 1117, 1295, 1320
MseI TTAA 9 cut(s) 303, 455, 474, 575, 773, 782, 1052, 1140, 1338
MslI CAYNNNNRTG 1 cut(s) 107
Msp20I TGGCCA 4 cut(s) 763, 1117, 1295, 1320
MspA1I CMGCKG 1 cut(s) 419
MspCI CTTAAG 1 cut(s) 1051
MspR9I CCNGG 1 cut(s) 273
MunI CAATTG 1 cut(s) 708
Mva1269I GAATGC 2 cut(s) 148, 680
MvaI CCWGG 1 cut(s) 273
MwoI GCNNNNNNNGC 3 cut(s) 419, 428, 1053
NdeII GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
NheI GCTAGC 1 cut(s) 628
NlaIV GGNNCC 4 cut(s) 519, 693, 1008, 1101
NmeAIII GCCGAG 1 cut(s) 635
NmuCI GTSAC 2 cut(s) 69, 100
NspI RCATGY 1 cut(s) 529
OliI CACNNNNGTG 1 cut(s) 107
PagI TCATGA 4 cut(s) 138, 460, 534, 1224
PctI GAATGC 2 cut(s) 148, 680
PfeI GAWTC 3 cut(s) 196, 361, 468
PflMI CCANNNNNTGG 1 cut(s) 871
PkrI GCNGC 6 cut(s) 415, 418, 421, 634, 679, 836
PleI GAGTC 2 cut(s) 143, 272
PpsI GAGTC 2 cut(s) 143, 272
Ppu21I YACGTR 1 cut(s) 944
PshAI GACNNNNGTC 1 cut(s) 1304
Psp6I CCWGG 1 cut(s) 271
PspGI CCWGG 1 cut(s) 271
PspN4I GGNNCC 4 cut(s) 519, 693, 1008, 1101
PspPI GGNCC 2 cut(s) 713, 1237
PstI CTGCAG 2 cut(s) 355, 418
PvuII CAGCTG 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 107
SaqAI TTAA 9 cut(s) 303, 455, 474, 575, 773, 782, 1052, 1140, 1338
SatI GCNGC 6 cut(s) 414, 417, 420, 633, 678, 835
Sau3AI GATC 7 cut(s) 175, 343, 664, 793, 850, 970, 1203
Sau96I GGNCC 2 cut(s) 713, 1237
SchI GAGTC 2 cut(s) 144, 273
ScrFI CCNGG 1 cut(s) 273
SduI GDGCHC 2 cut(s) 123, 1009
SfcI CTRYAG 2 cut(s) 351, 414
SinI GGWCC 1 cut(s) 1237
SmiMI CAYNNNNRTG 1 cut(s) 107
SmlI CTYRAG 3 cut(s) 884, 1051, 1283
SmoI CTYRAG 3 cut(s) 884, 1051, 1283
SsiI CCGC 2 cut(s) 241, 633
SspMI CTAG 5 cut(s) 188, 236, 629, 668, 1025
StyD4I CCNGG 1 cut(s) 271
StyI CCWWGG 2 cut(s) 307, 687
TaaI ACNGT 4 cut(s) 75, 216, 844, 1061
TaiI ACGT 1 cut(s) 946
TaqI TCGA 2 cut(s) 194, 973
TauI GCSGC 1 cut(s) 635
TfiI GAWTC 3 cut(s) 196, 361, 468
Tru1I TTAA 9 cut(s) 303, 455, 474, 575, 773, 782, 1052, 1140, 1338
Tru9I TTAA 9 cut(s) 303, 455, 474, 575, 773, 782, 1052, 1140, 1338
TscAI CASTG 4 cut(s) 80, 1064, 1099, 1309
TseFI GTSAC 2 cut(s) 69, 100
TseI GCWGC 5 cut(s) 413, 416, 419, 677, 834
Tsp45I GTSAC 2 cut(s) 69, 100
TspDTI ATGAA 9 cut(s) 155, 171, 173, 398, 449, 477, 551, 1209, 1241
TspRI CASTG 4 cut(s) 80, 1064, 1099, 1309
Van91I CCANNNNNTGG 1 cut(s) 871
Vha464I CTTAAG 1 cut(s) 1051
VpaK11BI GGWCC 1 cut(s) 1237
XapI RAATTY 2 cut(s) 742, 1342
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 1 cut(s) 529
XspI CTAG 5 cut(s) 188, 236, 629, 668, 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.