Rmu_sc0006218.1_g000015

UDP-glycosyltransferase 83A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006218.1
OG0000438
Physical Location & Seq
Forward (+)
70397 .. 74368
3972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006218.1_g000015.1.cds

Sequence Viewer

Length: 1281 bp
atggaacatggcaggtggttaattggcaatggcacaaaaatttctttttggagggataattttattggtcatccattgattgagtttttgggggtgagtggggatcatttggagggtgacattgcagatttcattcttgatggtacatggaattttcctcagctacttcttcttcactttcctggtctctgtgcttttattcaagagcatgttcctctgcctattaattcatatgaggaagataagctaatctggacacattctccttcgaggcagctaacggctcgtgatgcatatagtttcttgcgtcacaaatttcctacagtaagttggggaaaattaatatggtctaaatttattcctccccgcatgtccctcttggcttggaaagttttaaaaggacgggttctttcagaggattttcttcaaagacgtggggtatctcttgcatcaagatgtgttctttgtcatcatcacgagttgtttgatttgggtgggcttcatggttctcttgtggacatattgcatcatgggttggctggtcgtagtccccaactacgtgaactttggcttgcatcatttgtggtggtgctatggccacgtagagctccttcaatcattgaggttaattggatccctcctataatgggttgggtgaaaattaatacagatggctcttggaggagtgcctcaggtcaggctggctatggtggtgtgtttcgggatttcaaggtcgtctatgttgcttttggaagcttcacaatttttgatcaaacccagttccaagaattggctttggctcttgaactgtccaataggccattcctatgggttgtgaggccagacatctttgaaagcactgcttaccctgaaggatatgaagaaagagtaggctctaaagggttgatggtaggatgggccccccatcagaaggttctggcccatccttcaattgcttgcttcctaagccactgtggttggaactctaccttggaaggtctaagcaatagggttcctttcttgtgttggccatacttcgcggaccagttccttgataagagttacatttgtaatgtttggaaggtgggattgaagtttgataagaatgagaatgggatcattcctacaggagaaattaacaagaaggtggaacaacttcttggcgacgaaaatttcagagctagggcttcaaaactcaaggaaatggccatgactagggtcaaagaaggtggccagtctaacaagatatataagaatttcattgagtggatgaagtcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

426

Amino Acids

48.71

Weight (kDa)

8.57

Isoelectric Point (pI)

35.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000438)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02100
fragaria_vesca FvH4_6g46970 FvH4_6g46980 FvH4_6g46990 FvH4_6g47000
malus_domestica MD09G1064700.v1.1 MD09G1064800.v1.1 MD09G1064900.v1.1 MD09G1065000.v1.1 MD09G1065400.v1.1 MD17G1058100.v1.1 MD17G1058200.v1.1 MD17G1058300.v1.1 MD17G1058400.v1.1
prunus_persica Prupe.3G255900_v2.0.a1 Prupe.3G256000_v2.0.a1 Prupe.3G256100_v2.0.a1 Prupe.3G256200_v2.0.a1 Prupe.3G256300_v2.0.a1
pyrus_communis pycom111g05440 pycom111g05460 pycom111g05470 pycom111g05480 pycom111g05520 pycom17g05820 pycom17g05830
rosa_chinensis RchiOBHm_Chr2g0165951 RchiOBHm_Chr2g0165961 RchiOBHm_Chr2g0165981 RchiOBHm_Chr2g0165991 RchiOBHm_Chr2g0166001 RchiOBHm_Chr2g0166011 RchiOBHm_Chr2g0166021 RchiOBHm_Chr2g0166031 RchiOBHm_Chr2g0166041 RchiOBHm_Chr2g0166061
rosa_laevigata RLG00000021572 RLG00000021573 RLG00000021576 RLG00000021577 RLG00000021578 RLG00000021579 RLG00000021580
rosa_multiflora Rmu_co8157352.1_g000001 Rmu_sc0006218.1_g000013 Rmu_sc0006218.1_g000014 Rmu_sc0006218.1_g000015 Rmu_sc0006218.1_g000016 Rmu_sc0006218.1_g000017 Rmu_sc0006218.1_g000018 Rmu_sc0006218.1_g000019 Rmu_sc0006218.1_g000021 Rmu_ssc0000076.1_g000012 Rmu_ssc0000076.1_g000013
rosa_roxburghii Rroxscaffold_2G00085260 Rroxscaffold_2G00085270 Rroxscaffold_2G00085280
rosa_rugosa Rorug02G0519300 Rorug02G0519300 Rorug02G0519400 Rorug02G0519500 Rorug02G0519600 Rorug02G0519700 Rorug02G0519800 Rorug02G0519900.1
rosa_samantha Rh2AG585200 Rh2AG585300 Rh2AG585400 Rh2AG585500 Rh2AG585600 Rh2AG585700 Rh2AG585800 Rh2BG588800 Rh2BG597000 Rh2BG597100 Rh2BG597200 Rh2BG597300 Rh2BG597400 Rh2BG597500 Rh2CG567800 Rh2CG567900 Rh2CG568000 Rh2CG568100 Rh2DG607100 Rh2DG607200 Rh2DG607400 Rh2DG607500 Rh2DG607600
rosa_wichuraiana Rw2G047970 Rw2G048790 Rw2G048800 Rw2G048810 Rw2G048820 Rw2G048830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3
Acc36I ACCTGC 1 cut(s) 3
AccB7I CCANNNNNTGG 1 cut(s) 790
AccII CGCG 1 cut(s) 1040
AciI CCGC 2 cut(s) 367, 1040
AclWI GGATC 4 cut(s) 111, 628, 641, 1124
AcoI YGGCCR 4 cut(s) 596, 1028, 1206, 1231
AcsI RAATTY 6 cut(s) 39, 151, 314, 353, 1171, 1255
AcuI CTGAAG 1 cut(s) 891
AfaI GTAC 1 cut(s) 145
AfiI CCNNNNNNNGG 4 cut(s) 647, 790, 931, 1215
AgsI TTSAA 9 cut(s) 203, 428, 615, 730, 806, 854, 951, 1093, 1191
AjiI CACGTC 1 cut(s) 434
AjnI CCWGG 1 cut(s) 181
AjuI GAANNNNNNNTTGG 6 cut(s) 806, 838, 974, 1006, 1143, 1175
AluBI AGCT 6 cut(s) 163, 247, 277, 608, 756, 1181
AluI AGCT 6 cut(s) 163, 247, 277, 608, 756, 1181
Alw21I GWGCWC 1 cut(s) 610
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 4 cut(s) 111, 628, 641, 1124
AoxI GGCC 8 cut(s) 596, 818, 839, 918, 939, 1028, 1206, 1231
ApaI GGGCCC 1 cut(s) 922
ApeKI GCWGC 1 cut(s) 274
ApoI RAATTY 6 cut(s) 39, 151, 314, 353, 1171, 1255
AseI ATTAAT 3 cut(s) 225, 341, 663
Asp700I GAANNNNTTC 1 cut(s) 1155
AspS9I GGNCC 4 cut(s) 918, 919, 940, 1042
AsuHPI GGTGA 3 cut(s) 106, 128, 667
AvaII GGWCC 1 cut(s) 1042
AxyI CCTNAGG 1 cut(s) 691
BaeGI GKGCMC 1 cut(s) 922
BalI TGGCCA 4 cut(s) 598, 1030, 1208, 1233
BamHI GGATCC 1 cut(s) 633
BanII GRGCYC 2 cut(s) 610, 922
BarI GAAGNNNNNNTAC 2 cut(s) 595, 627
BauI CACGAG 2 cut(s) 285, 476
Bbv12I GWGCWC 1 cut(s) 610
BbvCI CCTCAGC 1 cut(s) 159
BbvI GCAGC 1 cut(s) 286
BccI CCATC 6 cut(s) 134, 665, 901, 909, 933, 951
BceAI ACGGC 1 cut(s) 297
BciT130I CCWGG 1 cut(s) 183
BclI TGATCA 1 cut(s) 769
BcoDI GTCTC 1 cut(s) 191
BfaI CTAG 2 cut(s) 1182, 1215
BfmI CTRYAG 2 cut(s) 321, 1125
BfuAI ACCTGC 1 cut(s) 3
BisI GCNGC 1 cut(s) 275
BlsI GCNGC 1 cut(s) 276
Bme1390I CCNGG 1 cut(s) 183
Bme18I GGWCC 1 cut(s) 1042
BmgBI CACGTC 1 cut(s) 434
BmgT120I GGNCC 4 cut(s) 918, 919, 940, 1042
BmiI GGNNCC 4 cut(s) 635, 920, 921, 1014
BmrFI CCNGG 1 cut(s) 183
BmrI ACTGGG 1 cut(s) 772
BmsI GCATC 4 cut(s) 280, 458, 535, 584
BmuI ACTGGG 1 cut(s) 772
BoxI GACNNNNGTC 1 cut(s) 1217
Bpu10I CCTNAGC 2 cut(s) 159, 965
BpuEI CTTGAG 1 cut(s) 1181
BsaAI YACGTR 2 cut(s) 560, 602
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 1 cut(s) 990
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 4 cut(s) 647, 790, 931, 1215
Bse1I ACTGG 3 cut(s) 778, 1045, 1234
Bse21I CCTNAGG 1 cut(s) 691
Bse3DI GCAATG 2 cut(s) 34, 120
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 990
BseGI GGATG 4 cut(s) 70, 920, 943, 1275
BseLI CCNNNNNNNGG 4 cut(s) 647, 790, 931, 1215
BseMI GCAATG 2 cut(s) 34, 120
BseMII CTCAG 2 cut(s) 173, 705
BseNI ACTGG 3 cut(s) 778, 1045, 1234
BseRI GAGGAG 1 cut(s) 697
BseSI GKGCMC 1 cut(s) 922
BseXI GCAGC 1 cut(s) 286
Bsh1236I CGCG 1 cut(s) 1040
BshFI GGCC 8 cut(s) 598, 820, 841, 920, 941, 1030, 1208, 1233
BsiHKAI GWGCWC 1 cut(s) 610
BslFI GGGAC 2 cut(s) 358, 534
BslI CCNNNNNNNGG 4 cut(s) 647, 790, 931, 1215
BsmAI GTCTC 1 cut(s) 191
BsmFI GGGAC 2 cut(s) 358, 534
BsnI GGCC 8 cut(s) 598, 820, 841, 920, 941, 1030, 1208, 1233
Bso31I GGTCTC 1 cut(s) 191
Bsp120I GGGCCC 1 cut(s) 918
Bsp1286I GDGCHC 2 cut(s) 610, 922
Bsp143I GATC 4 cut(s) 103, 633, 769, 1116
BspACI CCGC 2 cut(s) 367, 1040
BspANI GGCC 8 cut(s) 598, 820, 841, 920, 941, 1030, 1208, 1233
BspCNI CTCAG 2 cut(s) 172, 704
BspFNI CGCG 1 cut(s) 1040
BspLI GGNNCC 4 cut(s) 635, 920, 921, 1014
BspMI ACCTGC 1 cut(s) 3
BspPI GGATC 4 cut(s) 111, 628, 641, 1124
BspTNI GGTCTC 1 cut(s) 191
BsrDI GCAATG 2 cut(s) 34, 120
BsrI ACTGG 3 cut(s) 778, 1045, 1234
BssECI CCNNGG 1 cut(s) 990
BssMI GATC 4 cut(s) 103, 633, 769, 1116
BssSI CACGAG 2 cut(s) 285, 476
BssT1I CCWWGG 1 cut(s) 990
Bst2BI CACGAG 2 cut(s) 285, 476
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 3 cut(s) 325, 810, 974
BstBAI YACGTR 2 cut(s) 560, 602
BstC8I GCNNGC 3 cut(s) 573, 703, 958
BstDEI CTNAG 4 cut(s) 159, 691, 965, 1001
BstF5I GGATG 4 cut(s) 70, 920, 943, 1275
BstFNI CGCG 1 cut(s) 1040
BstKTI GATC 4 cut(s) 106, 636, 772, 1119
BstMAI GTCTC 1 cut(s) 191
BstMBI GATC 4 cut(s) 103, 633, 769, 1116
BstMWI GCNNNNNNNGC 2 cut(s) 290, 966
BstNI CCWGG 1 cut(s) 183
BstNSI RCATGY 2 cut(s) 212, 373
BstPAI GACNNNNGTC 1 cut(s) 1217
BstSCI CCNGG 1 cut(s) 181
BstSFI CTRYAG 2 cut(s) 321, 1125
BstSLI GKGCMC 1 cut(s) 922
BstUI CGCG 1 cut(s) 1040
BstV1I GCAGC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 633
BstXI CCANNNNNNTGG 1 cut(s) 828
BstYI RGATCY 1 cut(s) 633
Bsu36I CCTNAGG 1 cut(s) 691
BsuRI GGCC 8 cut(s) 598, 820, 841, 920, 941, 1030, 1208, 1233
BtrI CACGTC 1 cut(s) 434
BtsCI GGATG 4 cut(s) 70, 920, 943, 1275
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 2 cut(s) 858, 970
BveI ACCTGC 1 cut(s) 3
Cac8I GCNNGC 3 cut(s) 573, 703, 958
Cfr13I GGNCC 4 cut(s) 918, 919, 940, 1042
CseI GACGC 1 cut(s) 296
Csp6I GTAC 1 cut(s) 144
CspCI CAANNNNNGTGG 4 cut(s) 959, 994, 1210, 1245
CviAII CATG 7 cut(s) 8, 147, 209, 370, 503, 530, 1210
CviQI GTAC 1 cut(s) 144
DdeI CTNAG 4 cut(s) 159, 691, 965, 1001
DpnI GATC 4 cut(s) 105, 635, 771, 1118
DpnII GATC 4 cut(s) 103, 633, 769, 1116
DraI TTTAAA 1 cut(s) 396
EaeI YGGCCR 4 cut(s) 596, 1028, 1206, 1231
Ecl136II GAGCTC 1 cut(s) 608
Eco130I CCWWGG 1 cut(s) 990
Eco24I GRGCYC 2 cut(s) 610, 922
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 1 cut(s) 1042
Eco53kI GAGCTC 1 cut(s) 608
Eco57I CTGAAG 1 cut(s) 891
Eco81I CCTNAGG 1 cut(s) 691
EcoICRI GAGCTC 1 cut(s) 608
EcoO109I RGGNCCY 1 cut(s) 919
EcoRII CCWGG 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 990
EcoT22I ATGCAT 1 cut(s) 295
EcoT38I GRGCYC 2 cut(s) 610, 922
ErhI CCWWGG 1 cut(s) 990
FaeI CATG 7 cut(s) 11, 150, 212, 373, 506, 533, 1213
FalI AAGNNNNNCTT 2 cut(s) 847, 879
FaqI GGGAC 2 cut(s) 358, 534
FatI CATG 7 cut(s) 7, 146, 208, 369, 502, 529, 1209
FauI CCCGC 1 cut(s) 374
FauNDI CATATG 1 cut(s) 232
FbaI TGATCA 1 cut(s) 769
Fnu4HI GCNGC 1 cut(s) 275
FokI GGATG 3 cut(s) 57, 927, 930
FriOI GRGCYC 2 cut(s) 610, 922
Fsp4HI GCNGC 1 cut(s) 275
FspBI CTAG 2 cut(s) 1182, 1215
GluI GCNGC 1 cut(s) 275
HaeIII GGCC 8 cut(s) 598, 820, 841, 920, 941, 1030, 1208, 1233
HgaI GACGC 1 cut(s) 296
Hin1II CATG 7 cut(s) 11, 150, 212, 373, 506, 533, 1213
HindIII AAGCTT 1 cut(s) 754
HphI GGTGA 3 cut(s) 106, 128, 667
Hpy166II GTNNAC 2 cut(s) 517, 563
Hpy188I TCNGA 3 cut(s) 415, 930, 1178
Hpy188III TCNNGA 8 cut(s) 137, 203, 253, 287, 453, 476, 722, 803
Hpy8I GTNNAC 2 cut(s) 517, 563
Hpy99I CGWCG 1 cut(s) 1169
HpyAV CCTTC 9 cut(s) 276, 621, 866, 925, 957, 989, 1075, 1138, 1220
HpyCH4III ACNGT 3 cut(s) 325, 810, 974
HpyCH4IV ACGT 3 cut(s) 433, 559, 601
HpyCH4V TGCA 5 cut(s) 125, 293, 449, 526, 575
HpyF10VI GCNNNNNNNGC 2 cut(s) 290, 966
HpyF3I CTNAG 4 cut(s) 159, 691, 965, 1001
HpySE526I ACGT 3 cut(s) 433, 559, 601
Hsp92II CATG 7 cut(s) 11, 150, 212, 373, 506, 533, 1213
Ksp22I TGATCA 1 cut(s) 769
Kzo9I GATC 4 cut(s) 103, 633, 769, 1116
LmnI GCTCC 1 cut(s) 613
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 4 cut(s) 280, 458, 535, 584
MaeI CTAG 2 cut(s) 1182, 1215
MaeII ACGT 3 cut(s) 433, 559, 601
MaeIII GTNAC 3 cut(s) 116, 308, 1061
MalI GATC 4 cut(s) 105, 635, 771, 1118
MboI GATC 4 cut(s) 103, 633, 769, 1116
MboII GAAGA 5 cut(s) 161, 164, 251, 416, 893
MfeI CAATTG 1 cut(s) 951
MflI RGATCY 1 cut(s) 633
MhlI GDGCHC 2 cut(s) 610, 922
MlsI TGGCCA 4 cut(s) 598, 1030, 1208, 1233
MluNI TGGCCA 4 cut(s) 598, 1030, 1208, 1233
MmeI TCCRAC 1 cut(s) 959
Mox20I TGGCCA 4 cut(s) 598, 1030, 1208, 1233
Mph1103I ATGCAT 1 cut(s) 295
MroXI GAANNNNTTC 1 cut(s) 1155
MscI TGGCCA 4 cut(s) 598, 1030, 1208, 1233
MseI TTAA 7 cut(s) 20, 225, 341, 395, 627, 663, 1137
MslI CAYNNNNRTG 2 cut(s) 454, 826
Msp20I TGGCCA 4 cut(s) 598, 1030, 1208, 1233
MspR9I CCNGG 1 cut(s) 183
MunI CAATTG 1 cut(s) 951
MvaI CCWGG 1 cut(s) 183
MvnI CGCG 1 cut(s) 1040
MwoI GCNNNNNNNGC 2 cut(s) 290, 966
NdeI CATATG 1 cut(s) 232
NdeII GATC 4 cut(s) 103, 633, 769, 1116
NlaIII CATG 7 cut(s) 11, 150, 212, 373, 506, 533, 1213
NlaIV GGNNCC 4 cut(s) 635, 920, 921, 1014
NmuCI GTSAC 2 cut(s) 116, 308
NsiI ATGCAT 1 cut(s) 295
NspI RCATGY 2 cut(s) 212, 373
PaqCI CACCTGC 1 cut(s) 3
PdmI GAANNNNTTC 1 cut(s) 1155
PflMI CCANNNNNTGG 1 cut(s) 790
PkrI GCNGC 1 cut(s) 276
Ppu21I YACGTR 2 cut(s) 560, 602
PshAI GACNNNNGTC 1 cut(s) 1217
PshBI ATTAAT 3 cut(s) 225, 341, 663
Psp124BI GAGCTC 1 cut(s) 610
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 4 cut(s) 635, 920, 921, 1014
PspOMI GGGCCC 1 cut(s) 918
PspPI GGNCC 4 cut(s) 918, 919, 940, 1042
PsuI RGATCY 1 cut(s) 633
RsaI GTAC 1 cut(s) 145
RsaNI GTAC 1 cut(s) 144
RseI CAYNNNNRTG 2 cut(s) 454, 826
SacI GAGCTC 1 cut(s) 610
SaqAI TTAA 7 cut(s) 20, 225, 341, 395, 627, 663, 1137
SatI GCNGC 1 cut(s) 275
Sau3AI GATC 4 cut(s) 103, 633, 769, 1116
Sau96I GGNCC 4 cut(s) 918, 919, 940, 1042
ScrFI CCNGG 1 cut(s) 183
SduI GDGCHC 2 cut(s) 610, 922
SfaNI GCATC 4 cut(s) 280, 458, 535, 584
SfcI CTRYAG 2 cut(s) 321, 1125
SinI GGWCC 1 cut(s) 1042
SmiMI CAYNNNNRTG 2 cut(s) 454, 826
SmlI CTYRAG 1 cut(s) 1196
SmoI CTYRAG 1 cut(s) 1196
SsiI CCGC 2 cut(s) 367, 1040
SspMI CTAG 2 cut(s) 1182, 1215
SstI GAGCTC 1 cut(s) 610
StyD4I CCNGG 1 cut(s) 181
StyI CCWWGG 1 cut(s) 990
TaaI ACNGT 3 cut(s) 325, 810, 974
TaiI ACGT 3 cut(s) 436, 562, 604
TaqI TCGA 1 cut(s) 269
Tru1I TTAA 7 cut(s) 20, 225, 341, 395, 627, 663, 1137
Tru9I TTAA 7 cut(s) 20, 225, 341, 395, 627, 663, 1137
TscAI CASTG 2 cut(s) 865, 977
TseFI GTSAC 2 cut(s) 116, 308
TseI GCWGC 1 cut(s) 274
Tsp45I GTSAC 2 cut(s) 116, 308
TspDTI ATGAA 5 cut(s) 121, 219, 491, 894, 1249
TspRI CASTG 2 cut(s) 865, 977
Van91I CCANNNNNTGG 1 cut(s) 790
VpaK11BI GGWCC 1 cut(s) 1042
VspI ATTAAT 3 cut(s) 225, 341, 663
XapI RAATTY 6 cut(s) 39, 151, 314, 353, 1171, 1255
XceI RCATGY 2 cut(s) 212, 373
XmnI GAANNNNTTC 1 cut(s) 1155
XspI CTAG 2 cut(s) 1182, 1215
Zsp2I ATGCAT 1 cut(s) 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.