MD10G1031900.v1.1

tetratricopeptide repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000877
Physical Location & Seq
Forward (+)
4069414 .. 4080890
11477 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1031900.v1.1.491

Sequence Viewer

Length: 2799 bp
ATGTCCGAAACGTTGCCGGAACTCGCCATCCTCCGCTTGTACGAGCTTCGTCTCCTCCGCTGCACCCTCCCATCTCCGCCGTCCGATTTCTCACACCGTTCTCAACGGCGCGATGAAACACTTCCCGCTCACCCCCTCCACCCTCTAATCAACGACCTCCTAACTTCCATCGAGTCCGGGCAATACCTCCAAGCCCTCACCTCCCCCGACCTAGAACGCGTCGTTTTCAAATTCGCCGAGTCTGACTCGATACAATCGCTGGGAGACTCAGCGGAGTCGGCCGACCGAGTGTACTCCGGGTTGCTCGATCGAGTGGAATCCTTTGTATCCAGGGAATGTGAAGAGGAAGAAAACGATGGCGGCAAGGACAAGGCCTATAGAGTCATAGTCGTTCTGTGCATTGCTGTGGCAGCCTTTTTCGCTTTCACTCAATGCAACGTCACTGGACCGTTGGAGGGGTTGCCGAAGTGTCCTCTGCCGCTGGCGGTGCCCAAATGCGATGAGTGGGACAATTGGGCGCGCAATCAGCTTATGGCTGCTGGGTCTGACTTGCTTGGAAAGTTAATCAATATTCAGTATATAGTGTATGCGAAGATGTTGGCCATGAAGGTGAAAGATTTGCTATTTGAAGCGAGTGTGCCTTCTACGTATGGAATTAGGAGCATTTCATGGTGGCTCATTAGGATCACCCTTCTCCATCAAAGAATTCTTGATGACCGTTCTTCTTCTCTGTTCAATCTTTTGCAAGTCTTTACAAATGAAACTTTGAATCATTATGGTACACTGGAGAAAGTAACAAGCTACTGGGGTAACAATTTACTAAATGGCGAGGGTTCGTCACTTGTCTCAACAATTCATCTGGAAGCTGGAATGATGGAATACACCTATGCACGAGTTGATTCATGCAGGGTACATTTTGAATCAGCTGAAGCAGCAGCTGGTCTTCAGCTTTCTCTTACAGGTGTACTTGGCTTCCGTACTGTACATCAGGTAGAACCAAAGGCACAAATGATACTTTTAGCAAACCCAACTTCATCGAGCAGTGGTGGTAGCTGCCCCTCAGAAAGCCCTGGCTCCAAGACATGCGATTCTAGTATTGGCAGAAAGAATATAAATCCATCTGAAAACCATGAGGCCTCTGACATATTGATGACCCCAAAATTGTTAGTGAATGATGACAATTCTGGAACTAAACCAGAAGGCATTCAAGTTGATGGTACTGCTGCTGCCGCTTTGAGTGCAATCCATCAGGCAGTGATCCTGGCTAAGTGCCTTCTAATTGAAAAGAGCACACGGCATGATGACATGCAAAGATGGGAAATGGCTCCTTACATAGAGGCAATTGATTCTCAGCAGTCGTCATACTTTGTTATACGAGGCTTCTGTCACATCCTACGGATTCGGTGGGAGTCGGCACGTAGTCGCACAAAGGAACGTGCATTACTGATGATGGAAAAATTGGTTCAGGGTATCTCTGACCCTTCTCCAGGAGTGGCGGAAAGGATTCTTTTCTGCTATGACGTTTATATCCCCACAATTCCTGCCTTGCGGAAGGAATATGGTGAACTTTTAGTCAGCTGTGGTCTGATAGGGGAGGCGGTTAAAACTTTTGAGGATCTAGAGTTATGGGATAATCTTATATTCTGCTACCGCCTATTGGAGAAGAAAGCAGCAGCTGTTGAACTAATCAGGAAACGACTTTCTGAAACTCCCAATGACCCCAGGTTATGGTGCTCATTGGGTGATGTTACTAATGATGATGCCTGCTTTGAAAAAGCCCTGGAAGTTTCAAATGATAGATCGACTCGAGCAAAGCGGTCTCTTGCTCGTAGTGCATACAATAGAGGGGATTATGAAATCTCAAAAACCTTATGGGAGTCTGCAATGGCCTTGAATTCTTTGTATCCTGATGGCTGGTTTGCACTTGGGTCTGCTGCATTAAAGGCTAGGGATACTGAAAAGGCATTGGATGCCTTTACTCGGGCTGTTCAACTTGATCCTGAAAACGGGGAGGCATGGAATAATATTGCTTGTTTGCATATGATAAAAAAGAGGAATAAAGAATCCTTTGTTGCCTTTAGAGAAGCCCTGAAGTTCAAGCGAAACAGCTGGCAACTTTGGGAGAACTACAGTCATGTTGCCTTAGATGTTGGCAATATTGGTCAGGCTCTAGAGGCTGTGCAGATGGTCTTGGATATGACTAATAATAAAAGAGTTGATGCTGAATTTATGGAAAGAGTTGTGGCTGAGGTGGAAAGAATGTCTTCAAATATGACTCCGGCAATGATGGATAAAAATCTCTCTCCCAATCAAGAGTGTTCTGTAAATTCTCAAATAAATATTTGGAATGGTTTATCAAATGCAGAATCTGAGGTTGCAAAATCTCGGGAAATTAAACACTTAGTAGATTTCCTCGGAAAAGTTTTACAGAAGGTAGTTAAAAGTGGAAATGGAGCAGATATTTGGGGATTGTATGCACGGTGGCACAAAATGAAAGGAGACCTGACAATGTGCTCGGAAGCTTTATTAAAGCAAGTTAGATCATATCAGGGATCTGATTTGTGGAAAGATAAAGATCGATTTAAAAAGTTTGCTCAGTCATCCTTGGAACTCTGCAAGGTGTATATGGAAATTTCTCTGTCTACTGGTAGCCGTCGTGAACTTCTTGCGGCTGAGATGCACCTGAAGAACATAATTAGACAGGCGGGGAGTTTCGTGGACATGGAAGAATATCGGGATCTTGAAGCTTGCCTTGATGAAGTGAAGTCAAAACTTGAATCCAGTTCTCTAAGTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_16 TPR_2 TPR_8

Protein Analysis

933

Amino Acids

104.54

Weight (kDa)

5.61

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_16 PF13432 608 - 669 1.8e-08 Tetratricopeptide repeat
TPR_2 PF07719 636 - 669 1.7e-06 Tetratricopeptide repeat
TPR_CcmH_CycH PF23914 637 - 735 2.2e-07 Cytochrome c-type biogenesis protein H TPR domain
TPR_16 PF13432 640 - 698 3.8e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 487
AccB7I CCANNNNNTGG 1 cut(s) 1728
AccBSI CCGCTC 1 cut(s) 128
AccI GTMKAC 1 cut(s) 2642
AccII CGCG 3 cut(s) 111, 219, 520
AclI AACGTT 1 cut(s) 11
AclWI GGATC 6 cut(s) 692, 1252, 1623, 1991, 2560, 2745
AcoI YGGCCR 2 cut(s) 279, 600
AcsI RAATTY 6 cut(s) 230, 705, 1894, 2225, 2326, 2631
AcuI CTGAAG 4 cut(s) 929, 948, 2111, 2705
AfaI GTAC 8 cut(s) 41, 293, 781, 912, 966, 979, 984, 1219
AfiI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
AflIII ACRYGT 1 cut(s) 217
AjnI CCWGG 6 cut(s) 329, 1069, 1260, 1486, 1721, 1779
AloI GAACNNNNNNTCC 2 cut(s) 12, 44
Alw21I GWGCWC 3 cut(s) 1292, 1736, 2516
Alw26I GTCTC 5 cut(s) 56, 258, 850, 1824, 2493
AlwI GGATC 6 cut(s) 692, 1252, 1623, 1991, 2560, 2745
AlwNI CAGNNNCTG 3 cut(s) 938, 1676, 2369
Ama87I CYCGRG 3 cut(s) 1806, 1980, 2385
AoxI GGCC 5 cut(s) 279, 372, 600, 1134, 1887
ApoI RAATTY 6 cut(s) 230, 705, 1894, 2225, 2326, 2631
Asp700I GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
AspLEI GCGC 3 cut(s) 111, 520, 522
AspS9I GGNCC 1 cut(s) 446
AsuC2I CCSGG 2 cut(s) 178, 298
AsuHPI GGTGA 6 cut(s) 122, 190, 622, 679, 1574, 1754
AvaI CYCGRG 3 cut(s) 1806, 1980, 2385
AvaII GGWCC 1 cut(s) 446
BaeGI GKGCMC 1 cut(s) 492
BalI TGGCCA 1 cut(s) 602
BanI GGYRCC 1 cut(s) 487
BauI CACGAG 1 cut(s) 891
BbsI GAAGAC 2 cut(s) 935, 2256
Bbv12I GWGCWC 3 cut(s) 1292, 1736, 2516
BbvCI CCTCAGC 1 cut(s) 2247
BceAI ACGGC 4 cut(s) 64, 122, 1310, 2637
BciT130I CCWGG 6 cut(s) 331, 1071, 1262, 1488, 1723, 1781
BciVI GTATCC 3 cut(s) 337, 1914, 1945
BcnI CCSGG 2 cut(s) 178, 298
BcoDI GTCTC 5 cut(s) 56, 258, 850, 1824, 2493
BfaI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
BfmI CTRYAG 2 cut(s) 376, 2128
BfuI GTATCC 3 cut(s) 337, 1914, 1945
Bme1390I CCNGG 8 cut(s) 178, 298, 331, 1071, 1262, 1488, 1723, 1781
Bme18I GGWCC 1 cut(s) 446
BmeT110I CYCGRG 3 cut(s) 1806, 1980, 2385
BmgT120I GGNCC 1 cut(s) 446
BmiI GGNNCC 3 cut(s) 489, 1075, 1326
BmrFI CCNGG 8 cut(s) 178, 298, 331, 1071, 1262, 1488, 1723, 1781
BmrI ACTGGG 1 cut(s) 814
BmsI GCATC 4 cut(s) 1750, 1960, 2209, 2667
BmuI ACTGGG 1 cut(s) 814
BpiI GAAGAC 2 cut(s) 935, 2256
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BpmI CTGGAG 2 cut(s) 806, 1470
Bpu10I CCTNAGC 1 cut(s) 2247
BpuMI CCSGG 2 cut(s) 178, 298
Bsa29I ATCGAT 1 cut(s) 2578
BsaAI YACGTR 2 cut(s) 648, 1418
BsaBI GATNNNNATC 2 cut(s) 2295, 2574
BsaI GGTCTC 2 cut(s) 1824, 2493
BsaJI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2604
Bsc4I CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
Bse1I ACTGG 5 cut(s) 448, 789, 809, 2650, 2781
Bse3DI GCAATG 3 cut(s) 399, 1890, 2289
Bse8I GATNNNNATC 2 cut(s) 2295, 2574
BseBI CCWGG 6 cut(s) 331, 1071, 1262, 1488, 1723, 1781
BseCI ATCGAT 1 cut(s) 2578
BseDI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2604
BseGI GGATG 4 cut(s) 27, 1389, 1975, 2600
BseJI GATNNNNATC 2 cut(s) 2295, 2574
BseLI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
BseMI GCAATG 3 cut(s) 399, 1890, 2289
BseMII CTCAG 7 cut(s) 282, 1074, 1364, 2238, 2361, 2609, 2664
BseNI ACTGG 5 cut(s) 448, 789, 809, 2650, 2781
BsePI GCGCGC 1 cut(s) 518
BseRI GAGGAG 1 cut(s) 44
BseSI GKGCMC 1 cut(s) 492
BseX3I CGGCCG 1 cut(s) 279
BseYI CCCAGC 2 cut(s) 259, 539
BsgI GTGCAG 2 cut(s) 46, 2201
Bsh1236I CGCG 3 cut(s) 111, 219, 520
Bsh1285I CGRYCG 3 cut(s) 282, 286, 310
BshFI GGCC 5 cut(s) 281, 374, 602, 1136, 1889
BshNI GGYRCC 1 cut(s) 487
BshVI ATCGAT 1 cut(s) 2578
BsiEI CGRYCG 3 cut(s) 282, 286, 310
BsiHKAI GWGCWC 3 cut(s) 1292, 1736, 2516
BsiHKCI CYCGRG 3 cut(s) 1806, 1980, 2385
BsiSI CCGG 4 cut(s) 17, 177, 297, 2279
BslFI GGGAC 1 cut(s) 521
BslI CCNNNNNNNGG 6 cut(s) 455, 1487, 1657, 1728, 1980, 2006
BsmAI GTCTC 5 cut(s) 56, 258, 850, 1824, 2493
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 1 cut(s) 521
BsmI GAATGC 1 cut(s) 1203
BsnI GGCC 5 cut(s) 281, 374, 602, 1136, 1889
Bso31I GGTCTC 2 cut(s) 1824, 2493
BsoBI CYCGRG 3 cut(s) 1806, 1980, 2385
Bsp1286I GDGCHC 4 cut(s) 492, 1292, 1736, 2516
Bsp1407I TGTACA 1 cut(s) 982
BspANI GGCC 5 cut(s) 281, 374, 602, 1136, 1889
BspCNI CTCAG 7 cut(s) 281, 1073, 1363, 2239, 2362, 2608, 2665
BspDI ATCGAT 1 cut(s) 2578
BspFNI CGCG 3 cut(s) 111, 219, 520
BspLI GGNNCC 3 cut(s) 489, 1075, 1326
BspPI GGATC 6 cut(s) 692, 1252, 1623, 1991, 2560, 2745
BspT107I GGYRCC 1 cut(s) 487
BspTNI GGTCTC 2 cut(s) 1824, 2493
BsrBI CCGCTC 1 cut(s) 128
BsrDI GCAATG 3 cut(s) 399, 1890, 2289
BsrGI TGTACA 1 cut(s) 982
BsrI ACTGG 5 cut(s) 448, 789, 809, 2650, 2781
BssECI CCNNGG 6 cut(s) 330, 1069, 1721, 1779, 2413, 2604
BssHII GCGCGC 1 cut(s) 518
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 1 cut(s) 2604
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 6 cut(s) 331, 1071, 1262, 1488, 1723, 1781
Bst4CI ACNGT 6 cut(s) 98, 450, 719, 982, 2132, 2481
Bst6I CTCTTC 1 cut(s) 336
BstAPI GCANNNNNTGC 1 cut(s) 1970
BstAUI TGTACA 1 cut(s) 982
BstBAI YACGTR 2 cut(s) 648, 1418
BstC8I GCNNGC 5 cut(s) 483, 520, 1765, 2111, 2749
BstENI CCTNNNNNAGG 1 cut(s) 1485
BstF5I GGATG 4 cut(s) 27, 1389, 1975, 2600
BstFNI CGCG 3 cut(s) 111, 219, 520
BstHHI GCGC 3 cut(s) 111, 520, 522
BstMAI GTCTC 5 cut(s) 56, 258, 850, 1824, 2493
BstMCI CGRYCG 3 cut(s) 282, 286, 310
BstNI CCWGG 6 cut(s) 331, 1071, 1262, 1488, 1723, 1781
BstNSI RCATGY 2 cut(s) 1086, 1309
BstSCI CCNGG 8 cut(s) 176, 296, 329, 1069, 1260, 1486, 1721, 1779
BstSFI CTRYAG 2 cut(s) 376, 2128
BstSLI GKGCMC 1 cut(s) 492
BstSNI TACGTA 1 cut(s) 648
BstUI CGCG 3 cut(s) 111, 219, 520
BstV2I GAAGAC 2 cut(s) 935, 2256
BstX2I RGATCY 3 cut(s) 1615, 2552, 2737
BstYI RGATCY 3 cut(s) 1615, 2552, 2737
BstZI CGGCCG 1 cut(s) 279
Bsu15I ATCGAT 1 cut(s) 2578
BsuI GTATCC 3 cut(s) 337, 1914, 1945
BsuRI GGCC 5 cut(s) 281, 374, 602, 1136, 1889
BsuTUI ATCGAT 1 cut(s) 2578
BtgZI GCGATG 2 cut(s) 126, 513
BtsCI GGATG 4 cut(s) 27, 1389, 1975, 2600
BtsI GCAGTG 2 cut(s) 1048, 1260
BtsIMutI CAGTG 4 cut(s) 441, 782, 1048, 1260
Cac8I GCNNGC 5 cut(s) 483, 520, 1765, 2111, 2749
CaiI CAGNNNCTG 3 cut(s) 938, 1676, 2369
CfoI GCGC 3 cut(s) 111, 520, 522
Cfr13I GGNCC 1 cut(s) 446
ClaI ATCGAT 1 cut(s) 2578
CseI GACGC 1 cut(s) 208
Csp6I GTAC 8 cut(s) 40, 292, 780, 911, 965, 978, 983, 1218
CviQI GTAC 8 cut(s) 40, 292, 780, 911, 965, 978, 983, 1218
DraI TTTAAA 1 cut(s) 2584
EaeI YGGCCR 2 cut(s) 279, 600
EagI CGGCCG 1 cut(s) 279
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
EciI GGCGGA 2 cut(s) 66, 1511
EclXI CGGCCG 1 cut(s) 279
Eco105I TACGTA 1 cut(s) 648
Eco130I CCWWGG 1 cut(s) 2604
Eco147I AGGCCT 2 cut(s) 374, 1136
Eco31I GGTCTC 2 cut(s) 1824, 2493
Eco47I GGWCC 1 cut(s) 446
Eco52I CGGCCG 1 cut(s) 279
Eco57I CTGAAG 4 cut(s) 929, 948, 2111, 2705
Eco88I CYCGRG 3 cut(s) 1806, 1980, 2385
EcoNI CCTNNNNNAGG 1 cut(s) 1485
EcoRI GAATTC 2 cut(s) 705, 1894
EcoRII CCWGG 6 cut(s) 329, 1069, 1260, 1486, 1721, 1779
EcoT14I CCWWGG 1 cut(s) 2604
ErhI CCWWGG 1 cut(s) 2604
Esp3I CGTCTC 1 cut(s) 56
FalI AAGNNNNNCTT 4 cut(s) 2248, 2280, 2736, 2768
FaqI GGGAC 1 cut(s) 521
FauI CCCGC 2 cut(s) 133, 2698
FauNDI CATATG 1 cut(s) 2040
FblI GTMKAC 1 cut(s) 2642
FokI GGATG 4 cut(s) 14, 1376, 1982, 2587
FspBI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
GlaI GCGC 3 cut(s) 110, 519, 521
GsaI CCCAGC 2 cut(s) 263, 543
GsuI CTGGAG 2 cut(s) 806, 1470
HaeIII GGCC 5 cut(s) 281, 374, 602, 1136, 1889
HapII CCGG 4 cut(s) 17, 177, 297, 2279
HgaI GACGC 1 cut(s) 208
HhaI GCGC 3 cut(s) 111, 520, 522
Hin6I GCGC 3 cut(s) 109, 518, 520
HinP1I GCGC 3 cut(s) 109, 518, 520
HindIII AAGCTT 2 cut(s) 2520, 2745
HpaII CCGG 4 cut(s) 17, 177, 297, 2279
HphI GGTGA 6 cut(s) 122, 190, 622, 679, 1574, 1754
Hpy166II GTNNAC 7 cut(s) 292, 782, 965, 1565, 2643, 2660, 2719
Hpy8I GTNNAC 7 cut(s) 292, 782, 965, 1565, 2643, 2660, 2719
Hpy99I CGWCG 2 cut(s) 224, 2658
HpyAV CCTTC 8 cut(s) 601, 651, 701, 1193, 1283, 1491, 1546, 2425
HpyCH4III ACNGT 6 cut(s) 98, 450, 719, 982, 2132, 2481
HpyCH4IV ACGT 6 cut(s) 11, 438, 647, 1417, 1435, 1521
HpySE526I ACGT 6 cut(s) 11, 438, 647, 1417, 1435, 1521
HspAI GCGC 3 cut(s) 109, 518, 520
LmnI GCTCC 4 cut(s) 660, 1079, 1330, 2453
LweI GCATC 4 cut(s) 1750, 1960, 2209, 2667
MaeI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
MaeII ACGT 6 cut(s) 11, 438, 647, 1417, 1435, 1521
MaeIII GTNAC 6 cut(s) 439, 793, 809, 837, 1385, 1747
MbiI CCGCTC 1 cut(s) 128
MfeI CAATTG 2 cut(s) 511, 1341
MflI RGATCY 3 cut(s) 1615, 2552, 2737
MhlI GDGCHC 4 cut(s) 492, 1292, 1736, 2516
MlsI TGGCCA 1 cut(s) 602
MluI ACGCGT 1 cut(s) 217
MluNI TGGCCA 1 cut(s) 602
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 1 cut(s) 602
MroXI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
MscI TGGCCA 1 cut(s) 602
MseI TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2583
MslI CAYNNNNRTG 3 cut(s) 404, 608, 1148
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 8 cut(s) 60, 272, 481, 926, 938, 1578, 1676, 2109
MspI CCGG 4 cut(s) 17, 177, 297, 2279
MspR9I CCNGG 8 cut(s) 178, 298, 331, 1071, 1262, 1488, 1723, 1781
MunI CAATTG 2 cut(s) 511, 1341
Mva1269I GAATGC 1 cut(s) 1203
MvaI CCWGG 6 cut(s) 331, 1071, 1262, 1488, 1723, 1781
MvnI CGCG 3 cut(s) 111, 219, 520
NciI CCSGG 2 cut(s) 178, 298
NdeI CATATG 1 cut(s) 2040
NlaIV GGNNCC 3 cut(s) 489, 1075, 1326
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 3 cut(s) 439, 837, 1385
NspI RCATGY 2 cut(s) 1086, 1309
PaeR7I CTCGAG 1 cut(s) 1806
PauI GCGCGC 1 cut(s) 518
PceI AGGCCT 2 cut(s) 374, 1136
PctI GAATGC 1 cut(s) 1203
PdmI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
PflMI CCANNNNNTGG 1 cut(s) 1728
PfoI TCCNGGA 1 cut(s) 1486
Ple19I CGATCG 1 cut(s) 310
Ppu21I YACGTR 2 cut(s) 648, 1418
Psp1406I AACGTT 1 cut(s) 11
Psp6I CCWGG 6 cut(s) 329, 1069, 1260, 1486, 1721, 1779
PspFI CCCAGC 2 cut(s) 259, 539
PspGI CCWGG 6 cut(s) 329, 1069, 1260, 1486, 1721, 1779
PspN4I GGNNCC 3 cut(s) 489, 1075, 1326
PspPI GGNCC 1 cut(s) 446
PspXI VCTCGAGB 1 cut(s) 1806
PsrI GAACNNNNNNTAC 2 cut(s) 1425, 1457
PstNI CAGNNNCTG 3 cut(s) 938, 1676, 2369
PsuI RGATCY 3 cut(s) 1615, 2552, 2737
PteI GCGCGC 1 cut(s) 518
PvuI CGATCG 1 cut(s) 310
PvuII CAGCTG 5 cut(s) 926, 938, 1578, 1676, 2109
RsaI GTAC 8 cut(s) 41, 293, 781, 912, 966, 979, 984, 1219
RsaNI GTAC 8 cut(s) 40, 292, 780, 911, 965, 978, 983, 1218
RseI CAYNNNNRTG 3 cut(s) 404, 608, 1148
SaqAI TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2583
Sau96I GGNCC 1 cut(s) 446
ScrFI CCNGG 8 cut(s) 178, 298, 331, 1071, 1262, 1488, 1723, 1781
SduI GDGCHC 4 cut(s) 492, 1292, 1736, 2516
SfaNI GCATC 4 cut(s) 1750, 1960, 2209, 2667
SfcI CTRYAG 2 cut(s) 376, 2128
Sfr274I CTCGAG 1 cut(s) 1806
SinI GGWCC 1 cut(s) 446
SlaI CTCGAG 1 cut(s) 1806
SmiMI CAYNNNNRTG 3 cut(s) 404, 608, 1148
SmlI CTYRAG 1 cut(s) 1806
SmoI CTYRAG 1 cut(s) 1806
SnaBI TACGTA 1 cut(s) 648
SseBI AGGCCT 2 cut(s) 374, 1136
SspI AATATT 4 cut(s) 571, 2026, 2158, 2341
SspMI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
StuI AGGCCT 2 cut(s) 374, 1136
StyD4I CCNGG 8 cut(s) 176, 296, 329, 1069, 1260, 1486, 1721, 1779
StyI CCWWGG 1 cut(s) 2604
TaaI ACNGT 6 cut(s) 98, 450, 719, 982, 2132, 2481
TaiI ACGT 6 cut(s) 14, 441, 650, 1420, 1438, 1524
TaqI TCGA 8 cut(s) 171, 248, 306, 310, 1037, 1802, 1807, 2578
TaqII GACCGA 1 cut(s) 300
TatI WGTACW 3 cut(s) 291, 964, 982
TauI GCSGC 4 cut(s) 363, 481, 1232, 2672
Tru1I TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2583
Tru9I TTAA 7 cut(s) 563, 1602, 1940, 2394, 2439, 2528, 2583
TscAI CASTG 4 cut(s) 448, 789, 1048, 1260
TseFI GTSAC 3 cut(s) 439, 837, 1385
Tsp45I GTSAC 3 cut(s) 439, 837, 1385
TspGWI ACGGA 2 cut(s) 965, 1411
TspRI CASTG 4 cut(s) 448, 789, 1048, 1260
Van91I CCANNNNNTGG 1 cut(s) 1728
VpaK11BI GGWCC 1 cut(s) 446
XagI CCTNNNNNAGG 1 cut(s) 1485
XapI RAATTY 6 cut(s) 230, 705, 1894, 2225, 2326, 2631
XbaI TCTAGA 2 cut(s) 1618, 2170
XceI RCATGY 2 cut(s) 1086, 1309
XhoI CTCGAG 1 cut(s) 1806
XmiI GTMKAC 1 cut(s) 2642
XmnI GAANNNNTTC 4 cut(s) 120, 1203, 1503, 2263
XspI CTAG 5 cut(s) 212, 1092, 1619, 1947, 2171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.